GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000327-TA|BGIBMGA000327-PA|IPR000618|Insect cuticle
protein
         (131 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   0.83 
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   3.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   3.4  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    22   5.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   5.9  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     22   7.8  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 95  FQPQGSHLPTPPPIPEVIQRALAYL---ATAPPQPENNRP 131
           F P     PTPPP+P   +    Y+   +  P  P  N P
Sbjct: 795 FTPPTDRTPTPPPLPATAEPMGDYMIQPSNIPVHPYCNVP 834


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 67  ALQVEGQFQYPSEDGGTIQLSYIANENGFQPQGSHLP 103
           A+Q   Q+Q     GGT++   +   N  Q  GSHLP
Sbjct: 824 AMQETVQYQLRRR-GGTLKPGDVLLSNHPQAGGSHLP 859


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query: 96   QPQGSHLPTPPPIPEVIQR 114
            Q Q   LP PPP P   +R
Sbjct: 1072 QRQAERLPPPPPSPRTERR 1090


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)

Query: 52  AAERGALKNIGAEEPAL 68
           A ER A++NI AE+P +
Sbjct: 753 ALERQAIENIEAEDPPI 769


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 88   YIANENGFQPQGSHLPTPPPIPEVIQR 114
            Y A     + +G   PTP P P  + R
Sbjct: 1111 YSARNTSEEQRGRRHPTPSPPPRAVGR 1137


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 21  PTEPIPILKQESSIEPDGSYQYSYETGNGISA 52
           P+ PI I  +  + + D   ++SY  GN  +A
Sbjct: 125 PSGPIHIPAKRPAFDTDTRLRHSYPWGNDSAA 156


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.132    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,554
Number of Sequences: 2123
Number of extensions: 6950
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 6
length of query: 131
length of database: 516,269
effective HSP length: 58
effective length of query: 73
effective length of database: 393,135
effective search space: 28698855
effective search space used: 28698855
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 44 (21.8 bits)