GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000326-TA|BGIBMGA000326-PA|IPR000618|Insect cuticle
protein
         (131 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   3.4  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    22   7.8  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 47  GNGISADQKGELKKVGDVEALEVQGEFKYPGENG 80
           GN      KGE   +GD     + G   YPGE G
Sbjct: 110 GNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKG 143


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 94  FHPSGSHLPTSPPIPEAIQRALDFI 118
           F P     PT PP+P   +   D++
Sbjct: 795 FTPPTDRTPTPPPLPATAEPMGDYM 819


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.135    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,313
Number of Sequences: 2123
Number of extensions: 5772
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 131
length of database: 516,269
effective HSP length: 58
effective length of query: 73
effective length of database: 393,135
effective search space: 28698855
effective search space used: 28698855
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 44 (21.8 bits)