Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000326-TA|BGIBMGA000326-PA|IPR000618|Insect cuticle
protein
(131 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 32 0.15
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 32 0.15
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 32 0.15
Z99171-5|CAB16311.1| 280|Caenorhabditis elegans Hypothetical pr... 26 7.5
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 26 7.5
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 26 7.5
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 26 7.5
AF099917-9|AAC68787.1| 445|Caenorhabditis elegans Hypothetical ... 26 7.5
Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical pr... 26 10.0
Z71266-9|CAD24483.1| 489|Caenorhabditis elegans Hypothetical pr... 26 10.0
U61949-4|AAB03150.2| 414|Caenorhabditis elegans Hypothetical pr... 26 10.0
U51995-8|AAA96076.1| 331|Caenorhabditis elegans Dystroglycan pr... 26 10.0
AB040992-1|BAB21560.1| 489|Caenorhabditis elegans CeCRMP/DHP-1 ... 26 10.0
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 31.9 bits (69), Expect = 0.15
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 30 DDSQINGDGSYQYAFETGNGISADQKGE-LKKVGDVEALEVQGEFKYPGENGQDISLTYT 88
D S ++ D + + E G I D +G+ L G V + G + YP L
Sbjct: 5847 DGSLLSTDSTGSFVTEDGKVIEKDDEGKPLGPDGQVLPTDASGNYIYPVHGQDGTPLPTD 5906
Query: 89 ADENGFHPSGSHLPT 103
A P GS LPT
Sbjct: 5907 ASGAVIGPDGSPLPT 5921
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 26 PIVRDD-SQINGDGSYQYAFETGNGISADQKGE-LKKVGDVEALEVQGEFKYP--GENGQ 81
PIV D + + + + Y E G + + G+ + G V + G + YP G +GQ
Sbjct: 11762 PIVYPDGTPLATESTGNYVTENGEVVGKNTDGKPISPDGQVLPTDASGNYIYPAVGPDGQ 11821
Query: 82 DISLTYTAD--ENGFHPSGSHLPT 103
+ + FHP G+ LPT
Sbjct: 11822 VLPTDASGKLIYPVFHPDGTQLPT 11845
Score = 26.2 bits (55), Expect = 7.5
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 27 IVRDDS--QINGDGSYQYAFETGNGISADQKGELKKVGDVEALEVQGEFKYPGENGQDIS 84
I +DD + DG E+GN I D + G V+ +V G+ YP +
Sbjct: 5722 IEKDDEGKPVGPDGQVLPTDESGNYIYPDVTPD----GQVQPTDVSGKPVYPVRGPDGST 5777
Query: 85 LTYTADENGFHPSGSHLPT 103
L A P G +PT
Sbjct: 5778 LPTDASGAALGPDGKPIPT 5796
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.15
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 30 DDSQINGDGSYQYAFETGNGISADQKGE-LKKVGDVEALEVQGEFKYPGENGQDISLTYT 88
D S ++ D + + E G I D +G+ L G V + G + YP L
Sbjct: 5892 DGSLLSTDSTGSFVTEDGKVIEKDDEGKPLGPDGQVLPTDASGNYIYPVHGQDGTPLPTD 5951
Query: 89 ADENGFHPSGSHLPT 103
A P GS LPT
Sbjct: 5952 ASGAVIGPDGSPLPT 5966
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 26 PIVRDD-SQINGDGSYQYAFETGNGISADQKGE-LKKVGDVEALEVQGEFKYP--GENGQ 81
PIV D + + + + Y E G + + G+ + G V + G + YP G +GQ
Sbjct: 11807 PIVYPDGTPLATESTGNYVTENGEVVGKNTDGKPISPDGQVLPTDASGNYIYPAVGPDGQ 11866
Query: 82 DISLTYTAD--ENGFHPSGSHLPT 103
+ + FHP G+ LPT
Sbjct: 11867 VLPTDASGKLIYPVFHPDGTQLPT 11890
Score = 26.2 bits (55), Expect = 7.5
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 27 IVRDDS--QINGDGSYQYAFETGNGISADQKGELKKVGDVEALEVQGEFKYPGENGQDIS 84
I +DD + DG E+GN I D + G V+ +V G+ YP +
Sbjct: 5767 IEKDDEGKPVGPDGQVLPTDESGNYIYPDVTPD----GQVQPTDVSGKPVYPVRGPDGST 5822
Query: 85 LTYTADENGFHPSGSHLPT 103
L A P G +PT
Sbjct: 5823 LPTDASGAALGPDGKPIPT 5841
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.15
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 30 DDSQINGDGSYQYAFETGNGISADQKGE-LKKVGDVEALEVQGEFKYPGENGQDISLTYT 88
D S ++ D + + E G I D +G+ L G V + G + YP L
Sbjct: 5892 DGSLLSTDSTGSFVTEDGKVIEKDDEGKPLGPDGQVLPTDASGNYIYPVHGQDGTPLPTD 5951
Query: 89 ADENGFHPSGSHLPT 103
A P GS LPT
Sbjct: 5952 ASGAVIGPDGSPLPT 5966
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 26 PIVRDD-SQINGDGSYQYAFETGNGISADQKGE-LKKVGDVEALEVQGEFKYP--GENGQ 81
PIV D + + + + Y E G + + G+ + G V + G + YP G +GQ
Sbjct: 11807 PIVYPDGTPLATESTGNYVTENGEVVGKNTDGKPISPDGQVLPTDASGNYIYPAVGPDGQ 11866
Query: 82 DISLTYTAD--ENGFHPSGSHLPT 103
+ + FHP G+ LPT
Sbjct: 11867 VLPTDASGKLIYPVFHPDGTQLPT 11890
Score = 26.2 bits (55), Expect = 7.5
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 27 IVRDDS--QINGDGSYQYAFETGNGISADQKGELKKVGDVEALEVQGEFKYPGENGQDIS 84
I +DD + DG E+GN I D + G V+ +V G+ YP +
Sbjct: 5767 IEKDDEGKPVGPDGQVLPTDESGNYIYPDVTPD----GQVQPTDVSGKPVYPVRGPDGST 5822
Query: 85 LTYTADENGFHPSGSHLPT 103
L A P G +PT
Sbjct: 5823 LPTDASGAALGPDGKPIPT 5841
>Z99171-5|CAB16311.1| 280|Caenorhabditis elegans Hypothetical
protein F47G4.5 protein.
Length = 280
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 78 ENGQDISLTYTADENGFHPSGSHLPTSPPIPEAIQR 113
++ + I++TY PS LPTSPPIP I++
Sbjct: 54 QHNESITITYMGRPRS--PSVD-LPTSPPIPSVIRQ 86
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 74 KYPGENGQDISLTYTADENGFHPSGSHLPTSPP 106
++ +NGQ + + Y + + G HP+ SHL S P
Sbjct: 654 RFSVQNGQRLRIGYVSSDFGNHPT-SHLMQSIP 685
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 74 KYPGENGQDISLTYTADENGFHPSGSHLPTSPP 106
++ +NGQ + + Y + + G HP+ SHL S P
Sbjct: 476 RFSVQNGQRLRIGYVSSDFGNHPT-SHLMQSIP 507
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 74 KYPGENGQDISLTYTADENGFHPSGSHLPTSPP 106
++ +NGQ + + Y + + G HP+ SHL S P
Sbjct: 654 RFSVQNGQRLRIGYVSSDFGNHPT-SHLMQSIP 685
>AF099917-9|AAC68787.1| 445|Caenorhabditis elegans Hypothetical
protein F54D10.9 protein.
Length = 445
Score = 26.2 bits (55), Expect = 7.5
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 25 IPIVRDDSQINGDGSYQYAFETGNGISADQKGELKKVGDVEALEVQGEFKYPGENGQDIS 84
IPIV + Q N + S ++ TG S D G ++ GD +L + E G D
Sbjct: 370 IPIVYEIDQFNTECSARFTCPTGTYWSLDTGGPMEIRGD--SLGFTEALMWCAETGADTG 427
Query: 85 LTYTADENGF 94
+T + F
Sbjct: 428 KWFTDYQTEF 437
>Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical
protein D2023.7 protein.
Length = 336
Score = 25.8 bits (54), Expect = 10.0
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 35 NGDGSYQYAFETGNGISADQKGELKKVGDVEALEVQGEFKYPGENGQDISLTYTADENGF 94
+G+G+ A TG G A G G + G+ +PGEN +D + A NG
Sbjct: 95 SGNGNGDDALGTG-GCPAGPSGPQGSAGPDGIPGIDGQDGFPGENAED---SQNAPFNGC 150
Query: 95 HPSGSHLPTSP 105
P SP
Sbjct: 151 ITCAPGKPGSP 161
>Z71266-9|CAD24483.1| 489|Caenorhabditis elegans Hypothetical
protein R06C7.3 protein.
Length = 489
Score = 25.8 bits (54), Expect = 10.0
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 24 PIPIVRDDSQINGDGSYQYAFETGNGISADQKGELKKVGDVEALEVQGEFKYPG 77
P ++++ + +N DG ++ NGI + + + D E ++ PG
Sbjct: 3 PPLVIKNGTVVNEDGMFKADVLVRNGIIVEVSPNITALPDTEVIDATDRLVIPG 56
>U61949-4|AAB03150.2| 414|Caenorhabditis elegans Hypothetical
protein F49E8.2 protein.
Length = 414
Score = 25.8 bits (54), Expect = 10.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 31 DSQINGDGSYQYAFETGNGISADQKGELKKVGDVE 65
D + +G+ + +TGN +S + G L+ V D+E
Sbjct: 380 DETDSEEGARSESIDTGNKVSESEPGSLQSVIDLE 414
>U51995-8|AAA96076.1| 331|Caenorhabditis elegans Dystroglycan
protein 3 protein.
Length = 331
Score = 25.8 bits (54), Expect = 10.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 84 SLTYTA-DENGFHPSGSHLPTSPPIPEAIQRALDFI 118
SLT+ +E HP+ S LPTS P P Q L FI
Sbjct: 161 SLTFERFEECADHPT-SQLPTSMPAPSGEQIVLYFI 195
>AB040992-1|BAB21560.1| 489|Caenorhabditis elegans CeCRMP/DHP-1
protein.
Length = 489
Score = 25.8 bits (54), Expect = 10.0
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 24 PIPIVRDDSQINGDGSYQYAFETGNGISADQKGELKKVGDVEALEVQGEFKYPG 77
P ++++ + +N DG ++ NGI + + + D E ++ PG
Sbjct: 3 PPLVIKNGTVVNEDGMFKADVLVRNGIIVEVSPNITALPDTEVIDATDRLVIPG 56
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.310 0.135 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,026,209
Number of Sequences: 27539
Number of extensions: 133226
Number of successful extensions: 253
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 241
Number of HSP's gapped (non-prelim): 25
length of query: 131
length of database: 12,573,161
effective HSP length: 74
effective length of query: 57
effective length of database: 10,535,275
effective search space: 600510675
effective search space used: 600510675
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 54 (25.8 bits)
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