GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000325-TA|BGIBMGA000325-PA|IPR000618|Insect cuticle
protein
         (105 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   1.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   2.3  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       21   9.4  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 64  FQPQGAHLPTAPPVPAEIQKALDFL 88
           F P     PT PP+PA  +   D++
Sbjct: 795 FTPPTDRTPTPPPLPATAEPMGDYM 819


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 73  TAPPVPAEIQKALDFLATLPPPAHDTREYIR 103
           T P + A     +DF++   PP+   +EY R
Sbjct: 73  TVPGLVAAKVAGIDFISVYAPPSLSPQEYER 103


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 65  QPQGAHLPTAPPVPAEIQKALDFLATLPPPAHDTREY 101
           QPQ  +  ++   PA  Q A   + + PP   DT  Y
Sbjct: 37  QPQYGNRGSSFAAPALTQAAPAPVVSQPPATRDTFRY 73


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.137    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,449
Number of Sequences: 2123
Number of extensions: 4548
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 105
length of database: 516,269
effective HSP length: 55
effective length of query: 50
effective length of database: 399,504
effective search space: 19975200
effective search space used: 19975200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)