GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000325-TA|BGIBMGA000325-PA|IPR000618|Insect cuticle
protein
         (105 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    81   3e-18
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   3.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   5.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    20   7.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    20   7.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   7.1  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 81.0 bits (191), Expect = 3e-18
 Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 2/81 (2%)

Query: 12  YETGNGISAEEQGYIKNQGIPXXXXXXXXXXXXXXAPDGQVIHVQYLADENGFQPQGAHL 71
           +ET NGIS +E G  K   +               APDGQ + + Y+ADENGFQ QG+H+
Sbjct: 46  FETSNGISHQESGQPKQ--VDNETPVVSQGSDSYTAPDGQQVSITYVADENGFQVQGSHI 103

Query: 72  PTAPPVPAEIQKALDFLATLP 92
           PTAPP+P EIQ+AL++ A  P
Sbjct: 104 PTAPPIPPEIQRALEWNAAHP 124


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query: 85  LDFLATLPPPAHDTREYI 102
           + FL T+PP +H T  ++
Sbjct: 142 VSFLRTVPPYSHQTDVWV 159


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 61   ENGFQPQGAHLPTAPPVPAEIQKA 84
            + G    G+   T+PP P  I +A
Sbjct: 1383 DRGRNDDGSDRLTSPPTPLSISRA 1406


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 86  DFLATLPPPAHDTREYIRH 104
           DFL++L      + +YIRH
Sbjct: 306 DFLSSLAFRVFQSTQYIRH 324


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 85  LDFLATLPPPAH 96
           +DF  TLP P H
Sbjct: 498 IDFAKTLPLPQH 509


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 85  LDFLATLPPPAH 96
           +DF  TLP P H
Sbjct: 413 IDFAKTLPLPQH 424


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 85  LDFLATLPPPAH 96
           +DF  TLP P H
Sbjct: 732 IDFAKTLPLPQH 743


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.137    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,847
Number of Sequences: 429
Number of extensions: 949
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 105
length of database: 140,377
effective HSP length: 50
effective length of query: 55
effective length of database: 118,927
effective search space:  6540985
effective search space used:  6540985
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)