Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000324-TA|BGIBMGA000324-PA|IPR000618|Insect cuticle
protein
(114 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13545| Best HMM Match : Peptidase_M49 (HMM E-Value=0) 30 0.39
SB_28910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.69
SB_53355| Best HMM Match : CHCH (HMM E-Value=3.3e-07) 28 1.6
SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_52932| Best HMM Match : Ank (HMM E-Value=0) 28 2.1
SB_37813| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.1
SB_18078| Best HMM Match : CBFNT (HMM E-Value=6.4) 27 4.9
SB_56544| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.4
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 26 6.4
SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_4188| Best HMM Match : 7tm_1 (HMM E-Value=9e-06) 26 8.5
>SB_13545| Best HMM Match : Peptidase_M49 (HMM E-Value=0)
Length = 488
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 30 SEFDASPDGAYNYNFETSNGIVRSETGE 57
+E DA PDG+YN++ ++ +V +ETGE
Sbjct: 218 TEEDAKPDGSYNFDHKS---VVNTETGE 242
>SB_28910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 29.5 bits (63), Expect = 0.69
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 19 PPTEDYPKIVRSEFDASPDGAY 40
PPT+DY + RS+ D S DG Y
Sbjct: 17 PPTKDYDRRSRSQDDDSDDGCY 38
>SB_53355| Best HMM Match : CHCH (HMM E-Value=3.3e-07)
Length = 599
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 35 SPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVAVR-GSYSYTNTDGKPETITYF 93
SP G Y E + I R E +L +K H ++AVR G Y + D T+T+
Sbjct: 94 SPSGHYYKVCEPNFFIGRDENLDLTLKSRSVDKKHAVIAVRDGRYELYDMDSLNGTVTHS 153
Query: 94 A 94
A
Sbjct: 154 A 154
>SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 EFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVA 73
E D+ YNY+ NG+ S+ G+L DN HV+ A
Sbjct: 65 EPDSEQADGYNYDTSHHNGVATSQRGQLARLAMGDNN-HVLNA 106
>SB_52932| Best HMM Match : Ank (HMM E-Value=0)
Length = 1266
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 47 SNGIVRSETGELKEALDDDNKPHVIVAVRGSYSYTNTDGKPETITYFADET 97
S + + TG K LDD KPHV+ ++ SY D E + ET
Sbjct: 204 SKTVTKMFTGFRKLTLDDLRKPHVVKDIQ-SYILNRLDDDSELRKHLTRET 253
>SB_37813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 35 SPDGAYNYNFETSNGIVRS----ETGELKEALDDDNKPHVIVAVRGSYSY 80
SPDG + NFE NG + + + +A++ D++ V+V ++G Y++
Sbjct: 205 SPDGICSVNFEFYNGAMSTAQCRRLSSVLQAVERDDRVKVVV-LKGGYNF 253
>SB_18078| Best HMM Match : CBFNT (HMM E-Value=6.4)
Length = 148
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 21 TEDYPKIVRSEFDASPDGAYNYNFETSNGIVR----SETGELKEALDDDNKPHVI 71
TE+ P V ++F+ +P AY+ + E + V S +G + DDDN + +
Sbjct: 79 TENQPTRVSNDFEPTPSEAYDGSGEVTKRSVEEKDGSASGFYDKYQDDDNSENAL 133
>SB_56544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 34 ASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHV 70
ASP N ET + E K +D N+PH+
Sbjct: 502 ASPINMVNITIETDGRVESHEVFRAKLTVDTANRPHI 538
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 58 LKEALDDDNKPHVIVAVRG 76
+K+AL NKPHV++A G
Sbjct: 116 MKQALSLANKPHVVIATPG 134
>SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 42 YNFETSNGIVRSETGELKEALDDDNKPHVIVAVRGSYSYTNTDGK 86
+ +S+ I R G+ DDNKP + + YS TD K
Sbjct: 776 FEMSSSHKIGRYSAGDFPVQEVDDNKPSNVYRMARQYSKRITDDK 820
>SB_4188| Best HMM Match : 7tm_1 (HMM E-Value=9e-06)
Length = 522
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 41 NYNFETSNGIVRSETGELKEALDDDNKPHVIV 72
NY+F+ I R+++G KE+LDD P ++
Sbjct: 313 NYSFQL---IRRAKSGYYKESLDDSKTPKAVL 341
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.307 0.128 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,853,496
Number of Sequences: 59808
Number of extensions: 152517
Number of successful extensions: 254
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 249
Number of HSP's gapped (non-prelim): 11
length of query: 114
length of database: 16,821,457
effective HSP length: 73
effective length of query: 41
effective length of database: 12,455,473
effective search space: 510674393
effective search space used: 510674393
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 54 (25.8 bits)
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