GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000323-TA|BGIBMGA000323-PA|IPR010748|Origin recognition
complex subunit 3, N-terminal
         (518 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.96 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    24   2.2  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.4 bits (53), Expect = 0.96
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 124 LTDVFLFYDFSVKGLVQSIKYCMMDHFYG 152
           L+ V +F++F+ K L Q I   M  HF+G
Sbjct: 65  LSIVTIFFNFATKKLEQFIVRFMKYHFFG 93


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 207 YFRDALYKELMKLHDYLYSFYLCV 230
           YFR+ L + +     + Y+++LCV
Sbjct: 141 YFREYLAEAVQLYFQFYYTYFLCV 164


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.136    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,746
Number of Sequences: 317
Number of extensions: 5120
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 2
length of query: 518
length of database: 114,650
effective HSP length: 60
effective length of query: 458
effective length of database: 95,630
effective search space: 43798540
effective search space used: 43798540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)