Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000323-TA|BGIBMGA000323-PA|IPR010748|Origin recognition
complex subunit 3, N-terminal
(518 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16690.1 68418.m01954 origin recognition complex subunit 3-re... 58 1e-08
At1g21330.1 68414.m02667 hypothetical protein 33 0.61
At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical t... 32 1.1
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont... 31 1.4
At5g59940.1 68418.m07516 DC1 domain-containing protein / UV-B li... 31 1.4
At1g48800.1 68414.m05461 terpene synthase/cyclase family protein... 31 1.4
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 31 1.8
At5g39380.1 68418.m04771 calmodulin-binding protein-related has ... 30 3.2
At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identica... 30 3.2
At4g27640.1 68417.m03973 importin beta-2 subunit family protein ... 30 4.3
At5g53190.1 68418.m06612 nodulin MtN3 family protein similar to ... 29 5.6
At3g42980.1 68416.m04514 hypothetical protein 29 7.5
At1g67790.1 68414.m07736 expressed protein 29 7.5
At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 29 7.5
>At5g16690.1 68418.m01954 origin recognition complex subunit
3-related / ORC3-related low similarity to SP|Q9UBD5
Origin recognition complex subunit 3 (Origin recognition
complex subunit Latheo) {Homo sapiens}
Length = 556
Score = 58.4 bits (135), Expect = 1e-08
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 29 LVIVIPDFESFNCHLLQDFVMIISSYISSLPIVLVFGVATSVSALHKSFPYEVSSKLLIK 88
+VI++ D E +L D ++I+S + +PI L+ GV+T+ A K +L
Sbjct: 230 VVIIVDDTERCCGPVLSDLILILSEWAIKVPIFLIMGVSTAHDAPRKILSVNALQRLCAT 289
Query: 89 VFHSHSSAVYMNQVLEDIFLTHTVPFHLSGKAFELLTDVFLFYDFSVKGLVQSIKYCMMD 148
F S A M+ VL+ +FL F +S K + FL D ++ V+++K +
Sbjct: 290 RFTLSSPAERMDAVLKAVFLKPCSGFTVSHKVALFMRSYFLCQDGTLTSFVRTLKIACLQ 349
Query: 149 HF 150
HF
Sbjct: 350 HF 351
>At1g21330.1 68414.m02667 hypothetical protein
Length = 211
Score = 32.7 bits (71), Expect = 0.61
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 261 ITDTPSFKECMQLLSFQSQIKIVDTITGALKLLNSHLQSVSPIKPLQATPKKNNNNTDKV 320
ITDT K C+ L+ + Q+ T+ K N H +PI Q T + + +++
Sbjct: 133 ITDTSLGKGCLFLVRYTFQL----TVHSIWKERNGHRHGEAPIPSSQLTRRLDKQTRNRI 188
Query: 321 FAHRELGE 328
+ RELG+
Sbjct: 189 SSIRELGD 196
>At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical to
alcohol dehydrogenase GI:469467 from (Arabidopsis
thaliana)
Length = 379
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 98 YMNQVLE-DIFLTHTVPFHLSGKAFELL 124
YMN+ LE + F+THTVPF KAF+ +
Sbjct: 338 YMNKELELEKFITHTVPFSEINKAFDYM 365
>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
contains weak similarity to cytoplasmic linker protein
CLIP-170 (GI:2905649) [Gallus gallus]
Length = 588
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 337 HLMTFLRQLENANTEASISTAMDTDTNDNVENVPGSRYKLKEKLLKATR-VEKIQSEFEM 395
H+ F QL++ + + A+ T+T +EN + +LK KA +K+ E E
Sbjct: 239 HVENFRNQLKDCEISEAETEALATETLRQLENAKKAVEELKSDGTKAVESYKKMAVELEQ 298
Query: 396 IRCRFISYLEEMFAKGLQPPHTQTFHEIM 424
+ R + +LE + K P HEI+
Sbjct: 299 SKSRMV-WLEALVNKLQNNPADLENHEIL 326
>At5g59940.1 68418.m07516 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 651
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 454 YLQCSCCRLPSPESVAGTLPDVCLAYKLHRECGKHINLYDWLQ 496
YL C CR VC Y +H EC H N++D ++
Sbjct: 301 YLNCGVCREIVDRDCGAYACVVCSNYAVHWECAVHDNVWDGVE 343
>At1g48800.1 68414.m05461 terpene synthase/cyclase family protein
similar to terpene cyclase GI:9293912 from [Arabidopsis
thaliana]
Length = 603
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 160 CKREDLEEAILNLSPNDLESIRQLKSFRPYLEKQDCRTKISLFEDDQYFRDALYKELMKL 219
C + LE ++LNL L +++LK + ++QD +K+ Y+RD + + +
Sbjct: 276 CDKTILEFSMLNLKFLQLHYLQELKLLTKWYKEQDFESKL-----PPYYRDRIVELHLAT 330
Query: 220 HDYLYSFYLCVKLLSTLIKDI 240
Y+ Y V+++ T+I I
Sbjct: 331 LAYINPKYSRVRIILTMIYTI 351
>At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 384
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 343 RQLENANTEASISTAMDTDTNDNVENVPGSRYKLKEKLLKATRVEKIQSEFE 394
++ N EA++ MD D + EN + K KE + + EK +E E
Sbjct: 111 KEAAEKNEEAAVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGE 162
>At5g39380.1 68418.m04771 calmodulin-binding protein-related has
weak similarity to calmodulin-binding proteins
Length = 507
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 348 ANTEASISTAMDTDTNDNVENVPGSRYKLKEKLLKATRVEKIQSEFEMIRCRFISYLEEM 407
++T+ ++D + N+ ++ PGS K+K+K+ + + E FE+I+ + Y
Sbjct: 72 SSTKKIFKKSLDDNLNETLK--PGSS-KMKKKVREVEKNEGTDDSFEVIKREVVKYQASG 128
Query: 408 FAKGLQPP 415
+ G++ P
Sbjct: 129 VSSGMRKP 136
>At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identical
to Anthocyaninless2 [Arabidopsis thaliana] GI:5702094
Length = 802
Score = 30.3 bits (65), Expect = 3.2
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 285 TITGALKLLNSHLQSVSPIKPLQ 307
TI GAL+L+N+ LQ +SP+ P++
Sbjct: 424 TINGALQLMNAELQVLSPLVPVR 446
>At4g27640.1 68417.m03973 importin beta-2 subunit family protein low
similarity to importin 4 GI:18700635 from [Homo sapiens]
Length = 1048
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 346 ENANTEASISTAMDTDTNDNVENVPGSRYKLKEKLLKATRVEKIQSEFEMIRCRFISYLE 405
EN N +S+ D D V N+ L E KA + + + F YLE
Sbjct: 612 ENVNDFGGVSSDDDADDEPRVRNISVRTGVLDE---KAAATQALGLFALHTKSAFAPYLE 668
Query: 406 EMFAKGLQPPHTQTFHEIMFFSDISNVKKHIVGAPRGALHT 446
E + H+ FHE + ++ + KHI+ A T
Sbjct: 669 ESLK--IMDKHSAYFHEDVRLQAVTGL-KHILAAAHAIFQT 706
>At5g53190.1 68418.m06612 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 263
Score = 29.5 bits (63), Expect = 5.6
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 55 ISSLPIVLVFGVATSVSAL----HKSFPYEVSSKLLIKVFHSHSS-AVYMNQVLEDIFLT 109
++ +P+++ FG+ T++SAL H+ V S L+ + S V M +V+E +
Sbjct: 104 VTFVPVIVGFGLTTAISALVFDDHRHRKSFVGSVGLVASISMYGSPLVVMKKVIETRSVE 163
Query: 110 HTVPFHLSGKAFELLTDVFLFY 131
+ +PF+LS +F L + ++L Y
Sbjct: 164 Y-MPFYLSFFSF-LASSLWLAY 183
>At3g42980.1 68416.m04514 hypothetical protein
Length = 303
Score = 29.1 bits (62), Expect = 7.5
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 66 VATSVSALHKSFPYEVSSKLLIKVFHSHSSAVYM-NQVLEDIFL-THTVPFHLSGK 119
+A S + L PY+ S ++ +KVFHS M + LE + + H V H S K
Sbjct: 1 MAASFAFLRDIRPYKTSWRIQVKVFHSWRQYTSMTGETLELVLVDAHGVKIHASVK 56
>At1g67790.1 68414.m07736 expressed protein
Length = 576
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 240 IPNNLLGKTVREVY------TKCATECITDTPSFKECMQLLSFQSQIKI 282
+ NN+LG+T+ +Y K A C+ P FK+ Q+ + Q K+
Sbjct: 191 LDNNILGETLSNIYLTTYRVVKSALTCMQQIPYFKQTQQISITEVQDKV 239
>At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family
protein / kinesin motor family protein similar to
kinesin-like protein GB:CAB41097 GI:5541717 from
[Arabidopsis thaliana]; contains Pfam profiles PF00225:
Kinesin motor domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 894
Score = 29.1 bits (62), Expect = 7.5
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 178 ESIRQLKSFRPYLEKQDCRTKISLFEDDQYFRDALYKELMKLH-DYLYSFYLCVKLLSTL 236
E+ RQLK+F +E+ + + + + E ++ F +AL KE +K +Y+ S KL L
Sbjct: 431 ENERQLKAFDDDVERINRQAQNRISEVEKNFAEALEKEKLKCQMEYMES---VKKLEEKL 487
Query: 237 IKDIPNNLLGKTVREV 252
I + N+ GK EV
Sbjct: 488 ISNQRNHENGKRNGEV 503
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.136 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,883,778
Number of Sequences: 28952
Number of extensions: 496109
Number of successful extensions: 1251
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1247
Number of HSP's gapped (non-prelim): 15
length of query: 518
length of database: 12,070,560
effective HSP length: 84
effective length of query: 434
effective length of database: 9,638,592
effective search space: 4183148928
effective search space used: 4183148928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 61 (28.7 bits)
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