BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000322-TA|BGIBMGA000322-PA|IPR001699|Transcription factor, T-box, IPR008967|p53-like transcription factor, DNA-binding, IPR002070|Transcription factor, Brachyury (469 letters) Database: fruitfly 52,641 sequences; 24,830,863 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014296-2059|AAF49989.1| 747|Drosophila melanogaster CG7260-PA... 371 e-102 AY071335-1|AAL48957.1| 424|Drosophila melanogaster RE36967p pro... 188 1e-47 AF444795-1|AAM11543.1| 424|Drosophila melanogaster Dorsocross3 ... 188 1e-47 AE014296-1568|AAF50331.1| 424|Drosophila melanogaster CG5093-PA... 188 1e-47 AY113519-1|AAM29524.1| 391|Drosophila melanogaster RE59988p pro... 185 1e-46 BT025226-1|ABF17917.1| 391|Drosophila melanogaster FI01016p pro... 184 3e-46 AE014296-1572|AAF50328.2| 391|Drosophila melanogaster CG5133-PA... 184 3e-46 AB035412-1|BAA87864.1| 391|Drosophila melanogaster Tbx6 protein... 184 3e-46 AY084173-1|AAL89911.1| 469|Drosophila melanogaster RE40937p pro... 181 2e-45 AF444797-1|AAM11545.1| 469|Drosophila melanogaster Dorsocross2 ... 181 2e-45 AF444796-1|AAM11544.1| 469|Drosophila melanogaster Dorsocross2 ... 181 2e-45 AE014296-1571|AAX52749.1| 469|Drosophila melanogaster CG5187-PB... 181 2e-45 AE014296-1570|AAF50329.1| 469|Drosophila melanogaster CG5187-PA... 181 2e-45 AE014298-631|AAF45946.2| 972|Drosophila melanogaster CG3578-PA ... 180 3e-45 M81796-1|AAA28736.1| 974|Drosophila melanogaster optomotor-blin... 179 9e-45 Y16899-1|CAA76529.1| 712|Drosophila melanogaster optomotor-blin... 172 8e-43 AE014298-1177|AAF46373.1| 699|Drosophila melanogaster CG11202-P... 172 8e-43 BT023769-1|AAZ41777.1| 580|Drosophila melanogaster LP04777p pro... 167 4e-41 AY071236-1|AAL48858.1| 571|Drosophila melanogaster RE27439p pro... 167 4e-41 AE014134-920|AAF52250.1| 580|Drosophila melanogaster CG6634-PA ... 167 4e-41 X98766-1|CAA67304.1| 544|Drosophila melanogaster H15 protein pr... 166 5e-41 BT022140-1|AAY51535.1| 660|Drosophila melanogaster IP01538p pro... 166 5e-41 AE014134-917|AAF52249.1| 660|Drosophila melanogaster CG6604-PA ... 166 5e-41 S61732-1|AAB26697.1| 447|Drosophila melanogaster omb protein. 113 4e-25 S61744-1|AAB26699.1| 394|Drosophila melanogaster omb protein. 67 4e-11 M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 35 0.21 M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase... 35 0.21 AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 35 0.21 AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 35 0.21 AY095189-1|AAM12282.1| 201|Drosophila melanogaster LD26817p pro... 35 0.28 AE014296-1249|AAN12062.1| 201|Drosophila melanogaster CG8580-PB... 35 0.28 AE014296-1248|AAF50569.1| 201|Drosophila melanogaster CG8580-PA... 35 0.28 >AE014296-2059|AAF49989.1| 747|Drosophila melanogaster CG7260-PA protein. Length = 747 Score = 371 bits (913), Expect = e-102 Identities = 166/187 (88%), Positives = 178/187 (95%) Query: 30 ALDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKY 89 +LDDRELW+RFQ LTNEMIVTKNGRRMFPVVK++ASGLDP AMYTVLLEFVQ+DSHRWKY Sbjct: 140 SLDDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTVLLEFVQIDSHRWKY 199 Query: 90 VNGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKTNGNGQIMLNSLH 149 VNGEWVPGGKAEVPPSN IY+HPESPNFGAHWMKEPISFAKVKLTNKTNGNGQIMLNSLH Sbjct: 200 VNGEWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNKTNGNGQIMLNSLH 259 Query: 150 KYEPRVHLVKVGTDLRRIMTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERP 209 KYEPRVHLV+VG++ R ++TYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERP Sbjct: 260 KYEPRVHLVRVGSEQRHVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERP 319 Query: 210 EGYYQRD 216 + Y D Sbjct: 320 DTLYPHD 326 >AY071335-1|AAL48957.1| 424|Drosophila melanogaster RE36967p protein. Length = 424 Score = 188 bits (459), Expect = 1e-47 Identities = 90/181 (49%), Positives = 124/181 (68%), Gaps = 7/181 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L++ ELW +F ++ EMI+TK GRRMFP ++V+ SGL+ A Y VLLE V + R+K+ Sbjct: 63 LENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFS 122 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HPESP G HW + + F+KVKLTN T + NG I+L S+H Sbjct: 123 GSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMH 182 Query: 150 KYEPRVHLVKVGTDLRRIMTYP-----FPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLD 204 KY+PR+H+++ +DL +I P FPET+FIAVTAYQN+ +T LKI NPFAK F + Sbjct: 183 KYQPRLHVIRT-SDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRE 241 Query: 205 A 205 + Sbjct: 242 S 242 >AF444795-1|AAM11543.1| 424|Drosophila melanogaster Dorsocross3 protein. Length = 424 Score = 188 bits (459), Expect = 1e-47 Identities = 89/181 (49%), Positives = 124/181 (68%), Gaps = 7/181 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L++ ELW +F ++ EMI+TK GRRMFP ++V+ SGL+ A Y VLLE V + R+K+ Sbjct: 63 LENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFS 122 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HPESP G HW + + F+KVKLTN T + NG I+L S+H Sbjct: 123 GSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMH 182 Query: 150 KYEPRVHLVKVGTDLRRI-----MTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLD 204 KY+PR+H+++ +DL +I + FPET+FIAVTAYQN+ +T LKI NPFAK F + Sbjct: 183 KYQPRLHVIRT-SDLGQIPWAPQQAFVFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRE 241 Query: 205 A 205 + Sbjct: 242 S 242 >AE014296-1568|AAF50331.1| 424|Drosophila melanogaster CG5093-PA protein. Length = 424 Score = 188 bits (459), Expect = 1e-47 Identities = 90/181 (49%), Positives = 124/181 (68%), Gaps = 7/181 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L++ ELW +F ++ EMI+TK GRRMFP ++V+ SGL+ A Y VLLE V + R+K+ Sbjct: 63 LENNELWQQFHSIGTEMIITKCGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFS 122 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HPESP G HW + + F+KVKLTN T + NG I+L S+H Sbjct: 123 GSQWVPAGGAEPQSPQRMYLHPESPATGKHWQSQALLFSKVKLTNNTLDNNGHIVLASMH 182 Query: 150 KYEPRVHLVKVGTDLRRIMTYP-----FPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLD 204 KY+PR+H+++ +DL +I P FPET+FIAVTAYQN+ +T LKI NPFAK F + Sbjct: 183 KYQPRLHVIRT-SDLGQIPWAPQQAFIFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRE 241 Query: 205 A 205 + Sbjct: 242 S 242 >AY113519-1|AAM29524.1| 391|Drosophila melanogaster RE59988p protein. Length = 391 Score = 185 bits (451), Expect = 1e-46 Identities = 85/181 (46%), Positives = 124/181 (68%), Gaps = 7/181 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 LD+ +LW +F + EMI+TK+GRRMFP ++V+ SGL+ A Y VLLE V + R+K+ Sbjct: 63 LDNNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFS 122 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HP+SP GAHW + + F KVKLTN T + +G I+L S+H Sbjct: 123 GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMH 182 Query: 150 KYEPRVHLVKVGTDLRRI-----MTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLD 204 KY+PR+H+++ ++L ++ + FPET+F+AVTAYQN+ +T LKI NPFAK F + Sbjct: 183 KYQPRLHIIR-SSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRE 241 Query: 205 A 205 + Sbjct: 242 S 242 >BT025226-1|ABF17917.1| 391|Drosophila melanogaster FI01016p protein. Length = 391 Score = 184 bits (447), Expect = 3e-46 Identities = 84/181 (46%), Positives = 124/181 (68%), Gaps = 7/181 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L++ +LW +F + EMI+TK+GRRMFP ++V+ SGL+ A Y VLLE V + R+K+ Sbjct: 63 LENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFS 122 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HP+SP GAHW + + F KVKLTN T + +G I+L S+H Sbjct: 123 GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMH 182 Query: 150 KYEPRVHLVKVGTDLRRI-----MTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLD 204 KY+PR+H+++ ++L ++ + FPET+F+AVTAYQN+ +T LKI NPFAK F + Sbjct: 183 KYQPRLHIIR-SSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRE 241 Query: 205 A 205 + Sbjct: 242 S 242 >AE014296-1572|AAF50328.2| 391|Drosophila melanogaster CG5133-PA protein. Length = 391 Score = 184 bits (447), Expect = 3e-46 Identities = 84/181 (46%), Positives = 124/181 (68%), Gaps = 7/181 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L++ +LW +F + EMI+TK+GRRMFP ++V+ SGL+ A Y VLLE V + R+K+ Sbjct: 63 LENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFS 122 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HP+SP GAHW + + F KVKLTN T + +G I+L S+H Sbjct: 123 GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMH 182 Query: 150 KYEPRVHLVKVGTDLRRI-----MTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLD 204 KY+PR+H+++ ++L ++ + FPET+F+AVTAYQN+ +T LKI NPFAK F + Sbjct: 183 KYQPRLHIIR-SSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRE 241 Query: 205 A 205 + Sbjct: 242 S 242 >AB035412-1|BAA87864.1| 391|Drosophila melanogaster Tbx6 protein protein. Length = 391 Score = 184 bits (447), Expect = 3e-46 Identities = 84/181 (46%), Positives = 124/181 (68%), Gaps = 7/181 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L++ +LW +F + EMI+TK+GRRMFP ++V+ SGL+ A Y VLLE V + R+K+ Sbjct: 63 LENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFS 122 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HP+SP GAHW + + F KVKLTN T + +G I+L S+H Sbjct: 123 GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMH 182 Query: 150 KYEPRVHLVKVGTDLRRI-----MTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLD 204 KY+PR+H+++ ++L ++ + FPET+F+AVTAYQN+ +T LKI NPFAK F + Sbjct: 183 KYQPRLHIIR-SSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRE 241 Query: 205 A 205 + Sbjct: 242 S 242 >AY084173-1|AAL89911.1| 469|Drosophila melanogaster RE40937p protein. Length = 469 Score = 181 bits (441), Expect = 2e-45 Identities = 85/178 (47%), Positives = 120/178 (67%), Gaps = 7/178 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L + +LW +F + EMI+TK+GRRMFP ++++ SGL+ + Y VLLE V + R+K+ Sbjct: 60 LQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFS 119 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HP+SP GAHW +PI F KVKLTN T + +G I+L S+H Sbjct: 120 GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMH 179 Query: 150 KYEPRVHLVKVGTDLRRI-----MTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAF 202 KY+PR+H+++ DL +I + F ET+F+AVTAYQN+ +T LKI NPFAK F Sbjct: 180 KYQPRLHVIRT-ADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGF 236 >AF444797-1|AAM11545.1| 469|Drosophila melanogaster Dorsocross2 protein. Length = 469 Score = 181 bits (441), Expect = 2e-45 Identities = 85/178 (47%), Positives = 120/178 (67%), Gaps = 7/178 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L + +LW +F + EMI+TK+GRRMFP ++++ SGL+ + Y VLLE V + R+K+ Sbjct: 60 LQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFS 119 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HP+SP GAHW +PI F KVKLTN T + +G I+L S+H Sbjct: 120 GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMH 179 Query: 150 KYEPRVHLVKVGTDLRRI-----MTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAF 202 KY+PR+H+++ DL +I + F ET+F+AVTAYQN+ +T LKI NPFAK F Sbjct: 180 KYQPRLHVIRT-ADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGF 236 >AF444796-1|AAM11544.1| 469|Drosophila melanogaster Dorsocross2 protein. Length = 469 Score = 181 bits (441), Expect = 2e-45 Identities = 85/178 (47%), Positives = 120/178 (67%), Gaps = 7/178 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L + +LW +F + EMI+TK+GRRMFP ++++ SGL+ + Y VLLE V + R+K+ Sbjct: 60 LQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFS 119 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HP+SP GAHW +PI F KVKLTN T + +G I+L S+H Sbjct: 120 GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMH 179 Query: 150 KYEPRVHLVKVGTDLRRI-----MTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAF 202 KY+PR+H+++ DL +I + F ET+F+AVTAYQN+ +T LKI NPFAK F Sbjct: 180 KYQPRLHVIRT-ADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGF 236 >AE014296-1571|AAX52749.1| 469|Drosophila melanogaster CG5187-PB, isoform B protein. Length = 469 Score = 181 bits (441), Expect = 2e-45 Identities = 85/178 (47%), Positives = 120/178 (67%), Gaps = 7/178 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L + +LW +F + EMI+TK+GRRMFP ++++ SGL+ + Y VLLE V + R+K+ Sbjct: 60 LQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFS 119 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HP+SP GAHW +PI F KVKLTN T + +G I+L S+H Sbjct: 120 GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMH 179 Query: 150 KYEPRVHLVKVGTDLRRI-----MTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAF 202 KY+PR+H+++ DL +I + F ET+F+AVTAYQN+ +T LKI NPFAK F Sbjct: 180 KYQPRLHVIRT-ADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGF 236 >AE014296-1570|AAF50329.1| 469|Drosophila melanogaster CG5187-PA, isoform A protein. Length = 469 Score = 181 bits (441), Expect = 2e-45 Identities = 85/178 (47%), Positives = 120/178 (67%), Gaps = 7/178 (3%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L + +LW +F + EMI+TK+GRRMFP ++++ SGL+ + Y VLLE V + R+K+ Sbjct: 60 LQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFS 119 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKT-NGNGQIMLNSLH 149 +WVP G AE +Y+HP+SP GAHW +PI F KVKLTN T + +G I+L S+H Sbjct: 120 GSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMH 179 Query: 150 KYEPRVHLVKVGTDLRRI-----MTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAF 202 KY+PR+H+++ DL +I + F ET+F+AVTAYQN+ +T LKI NPFAK F Sbjct: 180 KYQPRLHVIRT-ADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGF 236 >AE014298-631|AAF45946.2| 972|Drosophila melanogaster CG3578-PA protein. Length = 972 Score = 180 bits (439), Expect = 3e-45 Identities = 87/182 (47%), Positives = 121/182 (66%), Gaps = 8/182 (4%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L+ ++LW +F L EM++TK+GR+MFP +K SGLD A Y +LL+ V D +R+K+ Sbjct: 332 LEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFH 391 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNK-TNGNGQI---MLN 146 N W+ GKA+ +YIHP+SP G WM++ +SF K+KLTN ++ +G + +LN Sbjct: 392 NSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILN 451 Query: 147 SLHKYEPRVHLVKVGTDLR----RIMTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAF 202 S+HKY+PR HLV+ L+ TY F ET+FIAVTAYQNE++T LKI NPFAK F Sbjct: 452 SMHKYQPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGF 511 Query: 203 LD 204 D Sbjct: 512 RD 513 >M81796-1|AAA28736.1| 974|Drosophila melanogaster optomotor-blind protein. Length = 974 Score = 179 bits (435), Expect = 9e-45 Identities = 89/195 (45%), Positives = 127/195 (65%), Gaps = 10/195 (5%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L+ ++LW +F L EM++TK+GR+MFP +K SGLD A Y +LL+ V D +R+K+ Sbjct: 332 LEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFH 391 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNK-TNGNGQI---MLN 146 N W+ GKA+ +YIHP+SP G WM++ +SF K+KLTN ++ +G + +LN Sbjct: 392 NSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILN 451 Query: 147 SLHKYEPRVHLVKVGTDLR----RIMTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAF 202 S+HKY+PR HLV+ L+ TY F ET+FIAVTAYQNE++T LKI NPFAK Sbjct: 452 SMHKYQPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGL 511 Query: 203 LD--AKERPEGYYQR 215 D A +R + Y++ Sbjct: 512 RDTGAGKREKNCYRQ 526 >Y16899-1|CAA76529.1| 712|Drosophila melanogaster optomotor-blind-related gene-1 protein. Length = 712 Score = 172 bits (419), Expect = 8e-43 Identities = 87/186 (46%), Positives = 116/186 (62%), Gaps = 12/186 (6%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L+ + LW +F EMI+TK GRRMFP +V GLDP A Y +++FV +D R++Y Sbjct: 200 LETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYA 259 Query: 91 --NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLT-NKTNGNGQIMLNS 147 N WV GKA+ I++HP+SP G++WMK+ +SF K+KLT N+ + NG I+LNS Sbjct: 260 FHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNS 319 Query: 148 LHKYEPRVHLVKV---------GTDLRRIMTYPFPETQFIAVTAYQNEEVTSLKIKYNPF 198 +H+Y+PR HLV + T+ FPET F AVTAYQN+ VT LKI NPF Sbjct: 320 MHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPF 379 Query: 199 AKAFLD 204 AK F D Sbjct: 380 AKGFRD 385 >AE014298-1177|AAF46373.1| 699|Drosophila melanogaster CG11202-PA protein. Length = 699 Score = 172 bits (419), Expect = 8e-43 Identities = 87/186 (46%), Positives = 116/186 (62%), Gaps = 12/186 (6%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L+ + LW +F EMI+TK GRRMFP +V GLDP A Y +++FV +D R++Y Sbjct: 200 LETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYA 259 Query: 91 --NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLT-NKTNGNGQIMLNS 147 N WV GKA+ I++HP+SP G++WMK+ +SF K+KLT N+ + NG I+LNS Sbjct: 260 FHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNS 319 Query: 148 LHKYEPRVHLVKV---------GTDLRRIMTYPFPETQFIAVTAYQNEEVTSLKIKYNPF 198 +H+Y+PR HLV + T+ FPET F AVTAYQN+ VT LKI NPF Sbjct: 320 MHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPF 379 Query: 199 AKAFLD 204 AK F D Sbjct: 380 AKGFRD 385 >BT023769-1|AAZ41777.1| 580|Drosophila melanogaster LP04777p protein. Length = 580 Score = 167 bits (405), Expect = 4e-41 Identities = 90/193 (46%), Positives = 122/193 (63%), Gaps = 18/193 (9%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASG----LDPTAMYTVLLEFVQVDSHR 86 L+ +ELW RF L EMI+TK GRRMFP V+V+ SG + P Y VL++ + +DS R Sbjct: 190 LETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKR 249 Query: 87 WKYV--NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTN-KTNGNGQI 143 ++Y W+ GKA+ P +Y HP+SP K+ ISF KVKLTN + + NGQI Sbjct: 250 YRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQI 309 Query: 144 MLNSLHKYEPRVHLVKVG---------TDLRRI--MTYPFPETQFIAVTAYQNEEVTSLK 192 +LNS+H+Y+PR+HLV++ +L+ + TY FPET F AVTAYQN+ +T LK Sbjct: 310 VLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLK 369 Query: 193 IKYNPFAKAFLDA 205 I NPFAK F D+ Sbjct: 370 IDSNPFAKGFRDS 382 >AY071236-1|AAL48858.1| 571|Drosophila melanogaster RE27439p protein. Length = 571 Score = 167 bits (405), Expect = 4e-41 Identities = 90/193 (46%), Positives = 122/193 (63%), Gaps = 18/193 (9%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASG----LDPTAMYTVLLEFVQVDSHR 86 L+ +ELW RF L EMI+TK GRRMFP V+V+ SG + P Y VL++ + +DS R Sbjct: 190 LETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKR 249 Query: 87 WKYV--NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTN-KTNGNGQI 143 ++Y W+ GKA+ P +Y HP+SP K+ ISF KVKLTN + + NGQI Sbjct: 250 YRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQI 309 Query: 144 MLNSLHKYEPRVHLVKVG---------TDLRRI--MTYPFPETQFIAVTAYQNEEVTSLK 192 +LNS+H+Y+PR+HLV++ +L+ + TY FPET F AVTAYQN+ +T LK Sbjct: 310 VLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLK 369 Query: 193 IKYNPFAKAFLDA 205 I NPFAK F D+ Sbjct: 370 IDSNPFAKGFRDS 382 >AE014134-920|AAF52250.1| 580|Drosophila melanogaster CG6634-PA protein. Length = 580 Score = 167 bits (405), Expect = 4e-41 Identities = 90/193 (46%), Positives = 122/193 (63%), Gaps = 18/193 (9%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASG----LDPTAMYTVLLEFVQVDSHR 86 L+ +ELW RF L EMI+TK GRRMFP V+V+ SG + P Y VL++ + +DS R Sbjct: 190 LETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKR 249 Query: 87 WKYV--NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTN-KTNGNGQI 143 ++Y W+ GKA+ P +Y HP+SP K+ ISF KVKLTN + + NGQI Sbjct: 250 YRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQI 309 Query: 144 MLNSLHKYEPRVHLVKVG---------TDLRRI--MTYPFPETQFIAVTAYQNEEVTSLK 192 +LNS+H+Y+PR+HLV++ +L+ + TY FPET F AVTAYQN+ +T LK Sbjct: 310 VLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLK 369 Query: 193 IKYNPFAKAFLDA 205 I NPFAK F D+ Sbjct: 370 IDSNPFAKGFRDS 382 >X98766-1|CAA67304.1| 544|Drosophila melanogaster H15 protein protein. Length = 544 Score = 166 bits (404), Expect = 5e-41 Identities = 88/193 (45%), Positives = 124/193 (64%), Gaps = 18/193 (9%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASG----LDPTAMYTVLLEFVQVDSHR 86 L+ +ELW +F L EMI+TK+GRRMFP V+V+ SG + P Y VLL+ V +DS R Sbjct: 165 LETKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDVVPLDSRR 224 Query: 87 WKYV--NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTN-KTNGNGQI 143 ++Y W+ GKA+ PP + IY HP+ P K+ +SF KVKLTN + + +GQ+ Sbjct: 225 YRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSPEALRKQVVSFEKVKLTNNEMDKSGQV 284 Query: 144 MLNSLHKYEPRVHLVKVG---------TDLRRI--MTYPFPETQFIAVTAYQNEEVTSLK 192 +LNS+H+Y+PR+HLV++ +L+ + T+ FPET F AVTAYQN+ +T LK Sbjct: 285 VLNSMHRYQPRIHLVRLSHGQSIPGSPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLK 344 Query: 193 IKYNPFAKAFLDA 205 I NPFAK F D+ Sbjct: 345 IDSNPFAKGFRDS 357 >BT022140-1|AAY51535.1| 660|Drosophila melanogaster IP01538p protein. Length = 660 Score = 166 bits (404), Expect = 5e-41 Identities = 88/193 (45%), Positives = 124/193 (64%), Gaps = 18/193 (9%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASG----LDPTAMYTVLLEFVQVDSHR 86 L+ +ELW +F L EMI+TK+GRRMFP V+V+ SG + P Y VLL+ V +DS R Sbjct: 281 LETKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDVVPLDSRR 340 Query: 87 WKYV--NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTN-KTNGNGQI 143 ++Y W+ GKA+ PP + IY HP+ P K+ +SF KVKLTN + + +GQ+ Sbjct: 341 YRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSPEALRKQVVSFEKVKLTNNEMDKSGQV 400 Query: 144 MLNSLHKYEPRVHLVKVG---------TDLRRI--MTYPFPETQFIAVTAYQNEEVTSLK 192 +LNS+H+Y+PR+HLV++ +L+ + T+ FPET F AVTAYQN+ +T LK Sbjct: 401 VLNSMHRYQPRIHLVRLSHGQSIPGSPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLK 460 Query: 193 IKYNPFAKAFLDA 205 I NPFAK F D+ Sbjct: 461 IDSNPFAKGFRDS 473 >AE014134-917|AAF52249.1| 660|Drosophila melanogaster CG6604-PA protein. Length = 660 Score = 166 bits (404), Expect = 5e-41 Identities = 88/193 (45%), Positives = 124/193 (64%), Gaps = 18/193 (9%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASG----LDPTAMYTVLLEFVQVDSHR 86 L+ +ELW +F L EMI+TK+GRRMFP V+V+ SG + P Y VLL+ V +DS R Sbjct: 281 LETKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDVVPLDSRR 340 Query: 87 WKYV--NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTN-KTNGNGQI 143 ++Y W+ GKA+ PP + IY HP+ P K+ +SF KVKLTN + + +GQ+ Sbjct: 341 YRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSPEALRKQVVSFEKVKLTNNEMDKSGQV 400 Query: 144 MLNSLHKYEPRVHLVKVG---------TDLRRI--MTYPFPETQFIAVTAYQNEEVTSLK 192 +LNS+H+Y+PR+HLV++ +L+ + T+ FPET F AVTAYQN+ +T LK Sbjct: 401 VLNSMHRYQPRIHLVRLSHGQSIPGSPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLK 460 Query: 193 IKYNPFAKAFLDA 205 I NPFAK F D+ Sbjct: 461 IDSNPFAKGFRDS 473 >S61732-1|AAB26697.1| 447|Drosophila melanogaster omb protein. Length = 447 Score = 113 bits (273), Expect = 4e-25 Identities = 48/105 (45%), Positives = 70/105 (66%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L+ ++LW +F L EM++TK+GR+MFP +K SGLD A Y +LL+ V D +R+K+ Sbjct: 332 LEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFH 391 Query: 91 NGEWVPGGKAEVPPSNAIYIHPESPNFGAHWMKEPISFAKVKLTN 135 N W+ GKA+ +YIHP+SP G WM++ +SF K+KLTN Sbjct: 392 NSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTN 436 >S61744-1|AAB26699.1| 394|Drosophila melanogaster omb protein. Length = 394 Score = 67.3 bits (157), Expect = 4e-11 Identities = 28/61 (45%), Positives = 42/61 (68%) Query: 31 LDDRELWVRFQTLTNEMIVTKNGRRMFPVVKVTASGLDPTAMYTVLLEFVQVDSHRWKYV 90 L+ ++LW +F L EM++TK+GR+MFP +K SGLD A Y +LL+ V D +R+K+ Sbjct: 332 LEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFH 391 Query: 91 N 91 N Sbjct: 392 N 392 >M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.melanogaster RpII215gene encoding RNA polymerase II, largest subunit, completecds. ). Length = 1896 Score = 35.1 bits (77), Expect = 0.21 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 6/88 (6%) Query: 382 SYWPNSLNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTS 441 SY P S N Y S AYS G+++ PT P S +G SP ++ Sbjct: 1728 SYSPTSPN---YSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDG--SPGSPQYTPG 1782 Query: 442 DREYK-FSTDETRHSPCEESSIPPRSPA 468 +Y S + SP S P SP+ Sbjct: 1783 SPQYSPASPKYSPTSPLYSPSSPQHSPS 1810 >M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase II largest subunit protein. Length = 408 Score = 35.1 bits (77), Expect = 0.21 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 6/88 (6%) Query: 382 SYWPNSLNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTS 441 SY P S N Y S AYS G+++ PT P S +G SP ++ Sbjct: 247 SYSPTSPN---YSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDG--SPGSPQYTPG 301 Query: 442 DREYK-FSTDETRHSPCEESSIPPRSPA 468 +Y S + SP S P SP+ Sbjct: 302 SPQYSPASPKYSPTSPLYSPSSPQHSPS 329 >AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p protein. Length = 1429 Score = 35.1 bits (77), Expect = 0.21 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 6/88 (6%) Query: 382 SYWPNSLNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTS 441 SY P S N Y S AYS G+++ PT P S +G SP ++ Sbjct: 1268 SYSPTSPN---YSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDG--SPGSPQYTPG 1322 Query: 442 DREYK-FSTDETRHSPCEESSIPPRSPA 468 +Y S + SP S P SP+ Sbjct: 1323 SPQYSPASPKYSPTSPLYSPSSPQHSPS 1350 >AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA protein. Length = 1887 Score = 35.1 bits (77), Expect = 0.21 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 6/88 (6%) Query: 382 SYWPNSLNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTS 441 SY P S N Y S AYS G+++ PT P S +G SP ++ Sbjct: 1726 SYSPTSPN---YSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDG--SPGSPQYTPG 1780 Query: 442 DREYK-FSTDETRHSPCEESSIPPRSPA 468 +Y S + SP S P SP+ Sbjct: 1781 SPQYSPASPKYSPTSPLYSPSSPQHSPS 1808 >AY095189-1|AAM12282.1| 201|Drosophila melanogaster LD26817p protein. Length = 201 Score = 34.7 bits (76), Expect = 0.28 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 413 FGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKFSTDETRHSPCEESSIPPRSP 467 FG G A S +G ++ +G H+ S+R F+ D T SP ESS+ SP Sbjct: 28 FGQAGSNAGPASPSRDGPSTSAGLPHTPSNR---FAKDSTEPSPFSESSLAKMSP 79 >AE014296-1249|AAN12062.1| 201|Drosophila melanogaster CG8580-PB, isoform B protein. Length = 201 Score = 34.7 bits (76), Expect = 0.28 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 413 FGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKFSTDETRHSPCEESSIPPRSP 467 FG G A S +G ++ +G H+ S+R F+ D T SP ESS+ SP Sbjct: 28 FGQAGSNAGPASPSRDGPSTSAGLPHTPSNR---FAKDSTEPSPFSESSLAKMSP 79 >AE014296-1248|AAF50569.1| 201|Drosophila melanogaster CG8580-PA, isoform A protein. Length = 201 Score = 34.7 bits (76), Expect = 0.28 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 413 FGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKFSTDETRHSPCEESSIPPRSP 467 FG G A S +G ++ +G H+ S+R F+ D T SP ESS+ SP Sbjct: 28 FGQAGSNAGPASPSRDGPSTSAGLPHTPSNR---FAKDSTEPSPFSESSLAKMSP 79 Database: fruitfly Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 24,830,863 Number of sequences in database: 52,641 Lambda K H 0.314 0.132 0.403 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,236,613 Number of Sequences: 52641 Number of extensions: 737143 Number of successful extensions: 1434 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 1341 Number of HSP's gapped (non-prelim): 39 length of query: 469 length of database: 24,830,863 effective HSP length: 88 effective length of query: 381 effective length of database: 20,198,455 effective search space: 7695611355 effective search space used: 7695611355 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits) S2: 64 (29.9 bits)
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