Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000322-TA|BGIBMGA000322-PA|IPR001699|Transcription
factor, T-box, IPR008967|p53-like transcription factor, DNA-binding,
IPR002070|Transcription factor, Brachyury
(469 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30740.1 68415.m03749 serine/threonine protein kinase, putati... 31 1.2
At2g41970.1 68415.m05192 protein kinase, putative similar to Pto... 31 1.6
At1g06700.1 68414.m00712 serine/threonine protein kinase, putati... 31 2.2
At3g59350.2 68416.m06618 serine/threonine protein kinase, putati... 30 2.9
At3g59350.1 68416.m06617 serine/threonine protein kinase, putati... 30 2.9
At2g43230.1 68415.m05373 serine/threonine protein kinase, putati... 30 2.9
At5g28480.1 68418.m03462 hypothetical protein 29 5.0
At3g62220.1 68416.m06990 serine/threonine protein kinase, putati... 29 5.0
At2g12100.1 68415.m01300 Ulp1 protease family protein contains P... 29 5.0
At1g45090.1 68414.m05169 Ulp1 protease family protein similar to... 29 5.0
At3g09560.2 68416.m01136 lipin family protein contains Pfam prof... 29 6.6
At3g09560.1 68416.m01135 lipin family protein contains Pfam prof... 29 6.6
At5g14610.1 68418.m01713 DEAD box RNA helicase, putative similar... 29 8.7
At4g23240.1 68417.m03351 protein kinase family protein contains ... 29 8.7
At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 29 8.7
>At2g30740.1 68415.m03749 serine/threonine protein kinase, putative
similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
esculentum] gi|3668069|gb|AAC61805
Length = 366
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 388 LNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKF 447
L T+GY EY TG+ ++ FG L G P GQ + +
Sbjct: 241 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLEL-LTGRKPVDHTMPRGQQSLVTWATPRL 299
Query: 448 STDETRH--SPCEESSIPPRSPAQ 469
S D+ + P + PP+S A+
Sbjct: 300 SEDKVKQCVDPKLKGEYPPKSVAK 323
>At2g41970.1 68415.m05192 protein kinase, putative similar to Pto
kinase interactor 1 (serine/threonine protein kinase)
[Lycopersicon esculentum] gi|3668069|gb|AAC61805
Length = 365
Score = 31.1 bits (67), Expect = 1.6
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 388 LNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKF 447
L T+GY EY TG+ ++ FG L G P GQ + +
Sbjct: 242 LGTFGYHAPEYAMTGQITQKSDVYSFGVVLLEL-LTGRKPVDHTMPKGQQSLVTWATPRL 300
Query: 448 STDETRH--SPCEESSIPPRSPAQ 469
S D+ + P + PP++ A+
Sbjct: 301 SEDKVKQCIDPKLNNDFPPKAVAK 324
>At1g06700.1 68414.m00712 serine/threonine protein kinase, putative
similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
esculentum] gi|3668069|gb|AAC61805
Length = 361
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 388 LNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKF 447
L T+GY EY TG+ ++ FG L G P GQ + +
Sbjct: 238 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLEL-LTGRKPVDHTMPRGQQSLVTWATPRL 296
Query: 448 STDETRH--SPCEESSIPPRSPAQ 469
S D+ + P ++ PP++ A+
Sbjct: 297 SEDKVKQCIDPKLKADYPPKAVAK 320
>At3g59350.2 68416.m06618 serine/threonine protein kinase, putative
similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
esculentum] gi|3668069|gb|AAC61805
Length = 366
Score = 30.3 bits (65), Expect = 2.9
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 388 LNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKF 447
L T+GY EY TG+ ++ FG L G P GQ + +
Sbjct: 241 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLEL-LTGRKPVDHTMPRGQQSLVTWATPRL 299
Query: 448 STDETRH--SPCEESSIPPRSPAQ 469
S D+ + P + PP++ A+
Sbjct: 300 SEDKVKQCVDPKLKGEYPPKAVAK 323
>At3g59350.1 68416.m06617 serine/threonine protein kinase, putative
similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
esculentum] gi|3668069|gb|AAC61805
Length = 408
Score = 30.3 bits (65), Expect = 2.9
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 388 LNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKF 447
L T+GY EY TG+ ++ FG L G P GQ + +
Sbjct: 283 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLEL-LTGRKPVDHTMPRGQQSLVTWATPRL 341
Query: 448 STDETRH--SPCEESSIPPRSPAQ 469
S D+ + P + PP++ A+
Sbjct: 342 SEDKVKQCVDPKLKGEYPPKAVAK 365
>At2g43230.1 68415.m05373 serine/threonine protein kinase, putative
similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
esculentum] gi|3668069|gb|AAC61805
Length = 406
Score = 30.3 bits (65), Expect = 2.9
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 388 LNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKF 447
L T+GY EY TG+ ++ FG L G P GQ + +
Sbjct: 281 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLEL-LTGRKPVDHTMPRGQQSLVTWATPRL 339
Query: 448 STDETRH--SPCEESSIPPRSPAQ 469
S D+ + P + PP++ A+
Sbjct: 340 SEDKVKQCVDPKLKGEYPPKAVAK 363
>At5g28480.1 68418.m03462 hypothetical protein
Length = 1230
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 400 GTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKFSTDETR 453
G GE S + GP+G E + A+G P+G D D + E R
Sbjct: 433 GDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEAFDKYAGELR 486
>At3g62220.1 68416.m06990 serine/threonine protein kinase, putative
similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
esculentum] gi|3668069|gb|AAC61805
Length = 361
Score = 29.5 bits (63), Expect = 5.0
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 388 LNTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKF 447
L T+GY EY TG+ + ++ FG L G P GQ + K
Sbjct: 237 LGTFGYHAPEYAMTGQLSAKSDVYSFGVVLLEL-LTGRKPVDHTLPRGQQSLVTWATPKL 295
Query: 448 STDETRHSPCEESSI----PPRSPAQ 469
S D+ + C +S + PP++ A+
Sbjct: 296 SEDKVKQ--CVDSRLGGDYPPKAVAK 319
>At2g12100.1 68415.m01300 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28270, At2g05450,
At1g45090, At2g16180, At2g06750
Length = 1224
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 400 GTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKFSTDETR 453
G GE S + GP+G E + A+G P+G D D + E R
Sbjct: 446 GDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEAFDKYAGELR 499
>At1g45090.1 68414.m05169 Ulp1 protease family protein similar to
At5g28270, At2g12100, At2g05450, At2g16180, At2g06750;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1210
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 400 GTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKFSTDETR 453
G GE S + GP+G E + A+G P+G D D + E R
Sbjct: 437 GDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEAFDKYAGELR 490
>At3g09560.2 68416.m01136 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 904
Score = 29.1 bits (62), Expect = 6.6
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Query: 103 PPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKTNGNGQIMLNSLHKYEPRVHLVKVGT 162
P + I P S G W PI F +VK T N + EP + T
Sbjct: 582 PKDDETTITPSSS--GTRWRLWPIPFRRVKTVEHTGSNSSSEEDLFVDSEPGLQ-NSPET 638
Query: 163 DLRRIMTYPFPETQFIAVTAYQNEEVTSLKIK 194
+ P Q + NE++ SL +K
Sbjct: 639 QSTTESRHESPRRQLVRTNVPTNEQIASLNLK 670
>At3g09560.1 68416.m01135 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 904
Score = 29.1 bits (62), Expect = 6.6
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Query: 103 PPSNAIYIHPESPNFGAHWMKEPISFAKVKLTNKTNGNGQIMLNSLHKYEPRVHLVKVGT 162
P + I P S G W PI F +VK T N + EP + T
Sbjct: 582 PKDDETTITPSSS--GTRWRLWPIPFRRVKTVEHTGSNSSSEEDLFVDSEPGLQ-NSPET 638
Query: 163 DLRRIMTYPFPETQFIAVTAYQNEEVTSLKIK 194
+ P Q + NE++ SL +K
Sbjct: 639 QSTTESRHESPRRQLVRTNVPTNEQIASLNLK 670
>At5g14610.1 68418.m01713 DEAD box RNA helicase, putative similar to
RNA helicase DRH1 [Arabidopsis thaliana] GI:3149952;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF00397:
WW domain
Length = 713
Score = 28.7 bits (61), Expect = 8.7
Identities = 29/76 (38%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 392 GYQPSEYVGTGEAAYSTEG-MQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKFSTD 450
GY S Y G GE+ Y + G +G G + G A R S SG S RE S +
Sbjct: 633 GYGDSGYGGRGESGYGSRGDSGYGGRGDS-GGRGSWAPSRDS-SGS--SGWGRERSRSPE 688
Query: 451 ETRHSPCEESSIPPRS 466
R P SS PPRS
Sbjct: 689 RFRGGPPSTSS-PPRS 703
>At4g23240.1 68417.m03351 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 352
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 388 LNTYGYQPSEYVGTGEAAYSTEGMQFG 414
+ T+GY P EYV G+ + ++ FG
Sbjct: 188 VGTFGYMPPEYVANGQFSMKSDVYSFG 214
>At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein
contains Pfam profile: PF01363 FYVE zinc finger
Length = 601
Score = 28.7 bits (61), Expect = 8.7
Identities = 22/77 (28%), Positives = 28/77 (36%)
Query: 389 NTYGYQPSEYVGTGEAAYSTEGMQFGPTGPALEAAGHSAEGRASPSGQDHSTSDREYKFS 448
NTY P G G A YS + P G E SA SPS S +
Sbjct: 47 NTYASAPPFTGGYGSADYSNYSQNYTPYGQNSEHVPPSAPSFTSPSQPPPSPPATSLNPN 106
Query: 449 TDETRHSPCEESSIPPR 465
+ T + P +I P+
Sbjct: 107 SYSTFNQPPPPPTIHPQ 123
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.132 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,942,189
Number of Sequences: 28952
Number of extensions: 333859
Number of successful extensions: 700
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 685
Number of HSP's gapped (non-prelim): 25
length of query: 469
length of database: 12,070,560
effective HSP length: 84
effective length of query: 385
effective length of database: 9,638,592
effective search space: 3710857920
effective search space used: 3710857920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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