GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000320-TA|BGIBMGA000320-PA|IPR002893|Zinc finger,
MYND-type, IPR009009|Barwin-related endoglucanase,
IPR007320|Programmed cell death protein 2, C-terminal
         (353 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   4.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   9.7  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)

Query: 133 CGARGPAHCSRCKKVYY 149
           C  +GP  C  CK V Y
Sbjct: 481 CWGKGPEQCLECKNVKY 497


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 12/75 (16%)

Query: 118 DEEFPMDHWTKLCD----VCGARGPA---HCSRCKKVYY---CSRKHQIID-WQKGHKEQ 166
           DE   +D+ T  CD    VC  +      HC  C+  Y+      K      +  GH  +
Sbjct: 447 DERGSLDN-TPSCDPVTGVCSCKENVEGRHCRECRLGYFNLDAENKFGCTPCFCYGHTLE 505

Query: 167 CPQLQSGDIVSTNNF 181
           C       IVST+NF
Sbjct: 506 CTSASGYSIVSTSNF 520


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.138    0.450 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,854
Number of Sequences: 2123
Number of extensions: 17403
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 2
length of query: 353
length of database: 516,269
effective HSP length: 65
effective length of query: 288
effective length of database: 378,274
effective search space: 108942912
effective search space used: 108942912
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)