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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000320-TA|BGIBMGA000320-PA|IPR002893|Zinc finger,
MYND-type, IPR009009|Barwin-related endoglucanase,
IPR007320|Programmed cell death protein 2, C-terminal
         (353 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32683-7|CAA83630.1|  386|Caenorhabditis elegans Hypothetical pr...   207   1e-53
Z71180-6|CAI79160.1|  702|Caenorhabditis elegans Hypothetical pr...    39   0.005
Z71180-5|CAD44114.1|  363|Caenorhabditis elegans Hypothetical pr...    39   0.005
Z71180-4|CAA94893.2|  723|Caenorhabditis elegans Hypothetical pr...    39   0.005
AL021475-7|CAI79248.1|  702|Caenorhabditis elegans Hypothetical ...    39   0.005
AL021475-6|CAD44157.1|  363|Caenorhabditis elegans Hypothetical ...    39   0.005
AL021475-5|CAA16314.2|  723|Caenorhabditis elegans Hypothetical ...    39   0.005
AF178536-1|AAD56365.1|  723|Caenorhabditis elegans EGL-9 protein.      39   0.005
Z46794-3|CAA86783.1|  429|Caenorhabditis elegans Hypothetical pr...    37   0.019
AC024792-3|AAF60684.2|  388|Caenorhabditis elegans Hypothetical ...    36   0.033
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    35   0.10 
Z99278-5|CAB16489.1|  290|Caenorhabditis elegans Hypothetical pr...    30   2.9  
Z81526-4|CAB04267.2|  430|Caenorhabditis elegans Hypothetical pr...    30   2.9  
AF022388-1|AAC38956.1|  290|Caenorhabditis elegans putative tran...    30   2.9  
Z78060-2|CAB01490.1|  114|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AC024771-10|AAK70664.1|  433|Caenorhabditis elegans Hypothetical...    29   3.8  
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho...    29   6.6  
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi...    29   6.6  
Z80789-3|CAB02553.1|  364|Caenorhabditis elegans Hypothetical pr...    28   8.7  
L29440-1|AAA98752.1|  570|Caenorhabditis elegans endoprotease pr...    28   8.7  
AY349017-1|AAQ55497.1|  474|Caenorhabditis elegans NHR-91A protein.    28   8.7  
AY008129-1|AAG32082.1|  364|Caenorhabditis elegans heterotrimeri...    28   8.7  
AL132841-4|CAB60329.2|  474|Caenorhabditis elegans Hypothetical ...    28   8.7  
AF273835-1|AAG15183.1|  476|Caenorhabditis elegans nuclear recep...    28   8.7  
AF273834-1|AAG15182.1|  475|Caenorhabditis elegans nuclear recep...    28   8.7  
AF273833-1|AAG15181.1|  475|Caenorhabditis elegans nuclear recep...    28   8.7  
AF101315-1|AAC69225.2|  369|Caenorhabditis elegans Hypothetical ...    28   8.7  
AF039719-1|AAB96754.1|  942|Caenorhabditis elegans Blistered cut...    28   8.7  

>Z32683-7|CAA83630.1|  386|Caenorhabditis elegans Hypothetical
           protein R07E5.10 protein.
          Length = 386

 Score =  207 bits (505), Expect = 1e-53
 Identities = 133/380 (35%), Positives = 182/380 (47%), Gaps = 34/380 (8%)

Query: 2   EPRKVDIGV-LEEKPSWLLHPRFFP-SKIGGKPSWLNLQDLPKSSELLCKKCQDPTVFLC 59
           EP  +  GV  E    + L  +F P  KIGGKPSWLN ++LPKS++LLC  C+ P  FL 
Sbjct: 8   EPVNLGFGVQFEPDDLYRLRSQFLPLGKIGGKPSWLNPKNLPKSADLLCNVCEKPLCFLM 67

Query: 60  QVYAP--FEDVEDCFHRTIFIFICKNGNCCSKNHTDNFIVLRCQLPRTNDFYSYQ-PYEE 116
           QV A     D    FHR++F+F+C+N +C   N   N    RCQLPR ND+YS+  P + 
Sbjct: 68  QVSANGGINDPPHAFHRSLFLFVCRNPSCSRTNDAANLKAFRCQLPRANDYYSFDGPMDP 127

Query: 117 K------DEEFPMDHWTKLCDVCGARGPAHCSRCKKVYYCSRKHQIIDWQKGHKEQCPQL 170
                  D   P D    LC +CG      C++C+   YCS+ HQ+IDW   HK +C + 
Sbjct: 128 DLDGDVADPRAPADG-PGLCRICGCSAAKKCAKCQVARYCSQAHQVIDW-PAHKLECAKA 185

Query: 171 QS-GDIVS-----TNNFKITKAGQSV--------LFKEWELIVXXXXXXXPNNTDINQEM 216
            + G I        N F   + G  +        LF               N+ D  +E 
Sbjct: 186 ATDGSITDEPKNPRNAFCFKEFGVEIDQEYMPANLFDGLSDDEGDEEEEEGNDEDETEEE 245

Query: 217 EK-----LNKMMQEKKVGXXXXXXXXXXXXYTRTVPNDKVFNKFSKRVARHPEQVLRYDR 271
           +K       K ++E K G             T   P D  F+KF++ V   P+Q++RY R
Sbjct: 246 KKARIREFEKFVKENK-GKNADMTKEDLDEATAEQPKDIDFDKFNRLVNLQPDQIIRYKR 304

Query: 272 GGVPLWITSNNDSLVHRPKCEYCNGERQFEFQIMPQLLNFLDVGVELNSIDWGVLAIYTC 331
            G PL  T  ++       CE C   R+FE Q+MP LL+ +DV     SIDW  + +YTC
Sbjct: 305 YGQPLRATGLSELPEVVEPCELCGAPRRFEMQLMPHLLSLIDVDAIGQSIDWASVYVYTC 364

Query: 332 KASCN-KGSAYMLEYMIKQD 350
            ASC      Y  E++ KQD
Sbjct: 365 SASCQIADDGYAKEFVAKQD 384


>Z71180-6|CAI79160.1|  702|Caenorhabditis elegans Hypothetical
           protein F22E12.4d protein.
          Length = 702

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 130 CDVCGARGPAH----CSRCKKVYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 179
           C  CG+   +     C  C  V YCS++HQ +DW   HK  C  LQ+  +V +N
Sbjct: 39  CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91


>Z71180-5|CAD44114.1|  363|Caenorhabditis elegans Hypothetical
           protein F22E12.4b protein.
          Length = 363

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 130 CDVCGARGPAH----CSRCKKVYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 179
           C  CG+   +     C  C  V YCS++HQ +DW   HK  C  LQ+  +V +N
Sbjct: 39  CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91


>Z71180-4|CAA94893.2|  723|Caenorhabditis elegans Hypothetical
           protein F22E12.4a protein.
          Length = 723

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 130 CDVCGARGPAH----CSRCKKVYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 179
           C  CG+   +     C  C  V YCS++HQ +DW   HK  C  LQ+  +V +N
Sbjct: 39  CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91


>AL021475-7|CAI79248.1|  702|Caenorhabditis elegans Hypothetical
           protein F22E12.4d protein.
          Length = 702

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 130 CDVCGARGPAH----CSRCKKVYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 179
           C  CG+   +     C  C  V YCS++HQ +DW   HK  C  LQ+  +V +N
Sbjct: 39  CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91


>AL021475-6|CAD44157.1|  363|Caenorhabditis elegans Hypothetical
           protein F22E12.4b protein.
          Length = 363

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 130 CDVCGARGPAH----CSRCKKVYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 179
           C  CG+   +     C  C  V YCS++HQ +DW   HK  C  LQ+  +V +N
Sbjct: 39  CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91


>AL021475-5|CAA16314.2|  723|Caenorhabditis elegans Hypothetical
           protein F22E12.4a protein.
          Length = 723

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 130 CDVCGARGPAH----CSRCKKVYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 179
           C  CG+   +     C  C  V YCS++HQ +DW   HK  C  LQ+  +V +N
Sbjct: 39  CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91


>AF178536-1|AAD56365.1|  723|Caenorhabditis elegans EGL-9 protein.
          Length = 723

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 130 CDVCGARGPAH----CSRCKKVYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 179
           C  CG+   +     C  C  V YCS++HQ +DW   HK  C  LQ+  +V +N
Sbjct: 39  CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91


>Z46794-3|CAA86783.1|  429|Caenorhabditis elegans Hypothetical
           protein R06F6.4 protein.
          Length = 429

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 141 CSRCKKVYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTNNFKI 183
           CS C+++ YCS++ Q  DW K HK +C  +++ + V+ ++ ++
Sbjct: 39  CSACRRLAYCSQECQRADW-KLHKVECKAIKTHNEVANDSIRL 80


>AC024792-3|AAF60684.2|  388|Caenorhabditis elegans Hypothetical
           protein Y48G1A.3 protein.
          Length = 388

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 128 KLCDVCGARGPA-HCSRCKKVYYCSRKHQIIDWQKGHKEQCPQLQSGDIVS 177
           + C VCG  G    C++CK + YCS++ Q  DW   HK+ C  L++   VS
Sbjct: 319 QFCSVCGHPGAKKRCTQCK-LAYCSQECQKFDWPI-HKKVCSFLKTRQEVS 367


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 141 CSRCKKVYYCSRKHQIIDWQK-GHKEQCPQLQSGDIV 176
           C  C    YCS++ Q+ +W   GH+E+C + +  + V
Sbjct: 729 CEECYDAVYCSKECQVANWSTGGHREECSKRKPSETV 765


>Z99278-5|CAB16489.1|  290|Caenorhabditis elegans Hypothetical
           protein Y53C12B.5a protein.
          Length = 290

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 131 DVCGARGPAHCSRCKKVYYCSR--KHQIIDWQKGHKEQCPQLQ 171
           ++C A+     +  +K YYC R   H  +  +KGHK  C  L+
Sbjct: 9   EICEAKAVDELAEQEKNYYCQRCLNHGELKPRKGHKPDCRYLK 51


>Z81526-4|CAB04267.2|  430|Caenorhabditis elegans Hypothetical
           protein F33H2.7 protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 141 CSRCKKVYYCSRKHQIIDWQKGHKEQCPQLQ 171
           C  C  V YC+ K Q  DW+  H+ +C  L+
Sbjct: 41  CDDCLAVSYCTLKCQRKDWKSCHQFECEILR 71


>AF022388-1|AAC38956.1|  290|Caenorhabditis elegans putative
           transcription factor MAB-3 protein.
          Length = 290

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 131 DVCGARGPAHCSRCKKVYYCSR--KHQIIDWQKGHKEQCPQLQ 171
           ++C A+     +  +K YYC R   H  +  +KGHK  C  L+
Sbjct: 9   EICEAKAVDELAEQEKNYYCQRCLNHGELKPRKGHKPDCRYLK 51


>Z78060-2|CAB01490.1|  114|Caenorhabditis elegans Hypothetical
           protein C34D1.2 protein.
          Length = 114

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)

Query: 145 KKVYYCSR--KHQIIDWQKGHKEQCP 168
           KK+YYC R   H +   +K HK +CP
Sbjct: 38  KKIYYCQRCLNHDVPRPRKNHKCECP 63


>AC024771-10|AAK70664.1|  433|Caenorhabditis elegans Hypothetical
           protein Y40B10A.9 protein.
          Length = 433

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 12/75 (16%)

Query: 74  RTIFIFI--CKNGNCCSKNHTDNFIV-LRCQLPRTNDFYSY---------QPYEEKDEEF 121
           R+IF+F+    +   C   H D+++  +  +L    DFY              EE++E++
Sbjct: 7   RSIFLFLVFATSATWCQHIHNDDYLTRIEEKLTTDRDFYDQWMELITLQNSQLEEQEEDY 66

Query: 122 PMDHWTKLCDVCGAR 136
           P+D+     + CG R
Sbjct: 67  PLDYIMTDLEKCGPR 81


>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
           homolog protein.
          Length = 1257

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 106 NDFYSYQPYEEKDEEFPMDHWTKLCDVCGARGPAHCSRCKKVYYCSRKHQIIDWQKGHKE 165
           NDF S   +    E+     W KL D    + P   SRC  + +    H  +    G   
Sbjct: 17  NDF-SGDRFPHDVEQMTQMTWLKLNDSKLEQVPDELSRCANLEHLQMAHNQLISVHGELS 75

Query: 166 QCPQLQSGDIVSTNNFK 182
             P+L+S  IV  NN K
Sbjct: 76  DLPRLRS-VIVRDNNLK 91


>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
           flightless) homologprotein 1 protein.
          Length = 1257

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 106 NDFYSYQPYEEKDEEFPMDHWTKLCDVCGARGPAHCSRCKKVYYCSRKHQIIDWQKGHKE 165
           NDF S   +    E+     W KL D    + P   SRC  + +    H  +    G   
Sbjct: 17  NDF-SGDRFPHDVEQMTQMTWLKLNDSKLEQVPDELSRCANLEHLQMAHNQLISVHGELS 75

Query: 166 QCPQLQSGDIVSTNNFK 182
             P+L+S  IV  NN K
Sbjct: 76  DLPRLRS-VIVRDNNLK 91


>Z80789-3|CAB02553.1|  364|Caenorhabditis elegans Hypothetical
           protein F48C11.1 protein.
          Length = 364

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 253 NKFS--KRVARHPEQVLRYDRGGVPLWITSNNDSLVHRPKCEYCNGERQFEFQIMPQLLN 310
           N+F   KR  R PE ++      +P+ I    D + H P  + C   R+F F ++     
Sbjct: 112 NRFEDFKRKLRDPEGLV------IPVVIGRCMDRVWHSPSLQLCYDTRRFRFALLDSAKY 165

Query: 311 FLDVGVELNSIDW--GVLAIYTCKAS 334
           F+D  V L   ++   +  I  C+ S
Sbjct: 166 FMDNIVRLTEDNYVPSIQDIVHCRIS 191


>L29440-1|AAA98752.1|  570|Caenorhabditis elegans endoprotease
           protein.
          Length = 570

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 130 CDVCGARGPAHCSRCKKVY 148
           C+ C A GP  C +C K Y
Sbjct: 441 CETCTAPGPMSCEKCSKGY 459


>AY349017-1|AAQ55497.1|  474|Caenorhabditis elegans NHR-91A protein.
          Length = 474

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 42  KSSELLCKKCQDPTVFLCQVYAPFEDVEDCFHRTI---FIFICKNGNCC 87
           KSS  LC  C D +  L    A  E  +  F R++    ++ C   NCC
Sbjct: 94  KSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCC 142


>AY008129-1|AAG32082.1|  364|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 364

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 253 NKFS--KRVARHPEQVLRYDRGGVPLWITSNNDSLVHRPKCEYCNGERQFEFQIMPQLLN 310
           N+F   KR  R PE ++      +P+ I    D + H P  + C   R+F F ++     
Sbjct: 112 NRFEDFKRKLRDPEGLV------IPVVIGRCMDRVWHSPSLQLCYDTRRFRFALLDSAKY 165

Query: 311 FLDVGVELNSIDW--GVLAIYTCKAS 334
           F+D  V L   ++   +  I  C+ S
Sbjct: 166 FMDNIVRLTEDNYVPSIQDIVHCRIS 191


>AL132841-4|CAB60329.2|  474|Caenorhabditis elegans Hypothetical
           protein Y15E3A.1a protein.
          Length = 474

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 42  KSSELLCKKCQDPTVFLCQVYAPFEDVEDCFHRTI---FIFICKNGNCC 87
           KSS  LC  C D +  L    A  E  +  F R++    ++ C   NCC
Sbjct: 94  KSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCC 142


>AF273835-1|AAG15183.1|  476|Caenorhabditis elegans nuclear receptor
           NHR-91 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 42  KSSELLCKKCQDPTVFLCQVYAPFEDVEDCFHRTI---FIFICKNGNCC 87
           KSS  LC  C D +  L    A  E  +  F R++    ++ C   NCC
Sbjct: 96  KSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCC 144


>AF273834-1|AAG15182.1|  475|Caenorhabditis elegans nuclear receptor
           NHR-91 protein.
          Length = 475

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 42  KSSELLCKKCQDPTVFLCQVYAPFEDVEDCFHRTI---FIFICKNGNCC 87
           KSS  LC  C D +  L    A  E  +  F R++    ++ C   NCC
Sbjct: 95  KSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCC 143


>AF273833-1|AAG15181.1|  475|Caenorhabditis elegans nuclear receptor
           NHR-91 protein.
          Length = 475

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 42  KSSELLCKKCQDPTVFLCQVYAPFEDVEDCFHRTI---FIFICKNGNCC 87
           KSS  LC  C D +  L    A  E  +  F R++    ++ C   NCC
Sbjct: 95  KSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCC 143


>AF101315-1|AAC69225.2|  369|Caenorhabditis elegans Hypothetical
           protein T22H9.4 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 8/22 (36%), Positives = 15/22 (68%), Gaps = 2/22 (9%)

Query: 148 YYCSR--KHQIIDWQKGHKEQC 167
           Y+C +   H ++ W+K HK++C
Sbjct: 135 YFCQKCKNHNVLVWKKNHKKEC 156


>AF039719-1|AAB96754.1|  942|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformd protein.
          Length = 942

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 130 CDVCGARGPAHCSRCKKVY 148
           C+ C A GP  C +C K Y
Sbjct: 813 CETCTAPGPMSCEKCSKGY 831


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.322    0.138    0.450 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,815,814
Number of Sequences: 27539
Number of extensions: 447918
Number of successful extensions: 938
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 923
Number of HSP's gapped (non-prelim): 30
length of query: 353
length of database: 12,573,161
effective HSP length: 82
effective length of query: 271
effective length of database: 10,314,963
effective search space: 2795354973
effective search space used: 2795354973
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)

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