Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000319-TA|BGIBMGA000319-PA|IPR007087|Zinc finger,
C2H2-type, IPR001214|SET
(1056 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 96 3e-20
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 73 2e-13
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 69 3e-12
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 65 6e-11
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 62 3e-10
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 53 2e-07
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 49 4e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 45 5e-05
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 44 8e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 42 3e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 42 6e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 41 8e-04
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 36 0.030
SPAPB1A10.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 33 0.16
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 31 0.64
SPBC23G7.09 |matmc_2|matmc|mating-type m-specific polypeptide mc... 31 0.85
SPBC1711.02 |matmc_1|matmc|mating-type m-specific polypeptide mc... 31 0.85
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 31 1.1
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 30 1.5
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 1.5
SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit... 30 1.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 2.6
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 29 3.4
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 29 3.4
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 29 3.4
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 29 4.5
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 29 4.5
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 28 7.9
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 28 7.9
SPBC4F6.05c |||lectin |Schizosaccharomyces pombe|chr 2|||Manual 28 7.9
SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr 3... 28 7.9
SPAC24H6.02c |||TIM23 translocase complex subunit Tim15|Schizosa... 28 7.9
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 95.9 bits (228), Expect = 3e-20
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 789 HYECNVCCKTFGQLSNLKVHLRTHSGERPFKCNV--CNKSFTQLAHLQKHHLVHTGEKPH 846
H C K + + S L+ HLRTHS ERPF C+ C+K+F + +HL+ H HT KP
Sbjct: 24 HCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPF 83
Query: 847 QC--DICKKRFSSTSNLKTHLRLHSGQKPYAC--DLCMQKFTQFVHLKLH-KRLHTNDRP 901
C D C +F + +L+ H+ +H KPYAC + C + F++ L+ H HT+ P
Sbjct: 84 SCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLP 143
Query: 902 YVC--QGCDKKYISASGLRTHWKTTSCKPNNIEEVLAITNAANTECIGNVDKDCHEREGH 959
Y C Q C+ ++ + L+ H N E + + + C+G+ + + +
Sbjct: 144 YPCTYQDCELRFATKQKLQNH-------VNRAHEKIISYSCPHESCVGHEGFEKWSQLQN 196
Query: 960 DAYEVHSPS 968
E H PS
Sbjct: 197 HIREAHVPS 205
Score = 57.2 bits (132), Expect = 1e-08
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 17/137 (12%)
Query: 789 HYECNVCCKTFGQLSNLKVHLRTHSGERPFKCNVCNKSFTQLAHLQKHHLVH----TGEK 844
H C V + F + S L+ H+R P C++C + F AHL+ H ++H K
Sbjct: 179 HESC-VGHEGFEKWSQLQNHIR--EAHVP-SCSICGRQFKTAAHLRHHVVLHQTTLEERK 234
Query: 845 PHQCDI--CKKRFSSTSNLKTHLR-LHSGQKPYACDLCMQKFTQFVHLKLHKRLHTNDRP 901
+ C + CKK F+ +S LK H+ +H G + CD C KF + H+ L + L
Sbjct: 235 TYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKF-GYKHM-LQRHLERG--- 289
Query: 902 YVCQGCDKKYISASGLR 918
C+ K YI+ G++
Sbjct: 290 -TCKKAHKPYINECGIK 305
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 73.3 bits (172), Expect = 2e-13
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 715 HYPSSSTSVITLKNCSQLSLIQNGNV-GGQVLPPHGSVSPDGSCGLMMSPISPNSQASRG 773
H+ SS + ++ L I+N N L + S ++ S NS +S+
Sbjct: 501 HFSHSSECLSVNQDTELLGKIENDNSKSNDYLSVRNTRPRSRSLNSLVGNKSENSSSSKA 560
Query: 774 YRSLPYPLKKKDGKMHYECNV--CCKTFGQLSNLKVHLRTHSGERPFKCNVCNKSFTQLA 831
K G +Y C C K F + NLK H+ TH+ RPF+C++C KSF +
Sbjct: 561 KSE-----SKSQG--NYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQH 613
Query: 832 HLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQ 871
++H +HTG K C C +RF+ L H + GQ
Sbjct: 614 DKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQ 653
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 823 CNKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDLCMQK 882
CNK FT+ +L+ H HT +P QC ICKK F+ + + H +LH+G K +AC C Q+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 883 FTQFVHLKLH 892
F + L H
Sbjct: 637 FARMDALNRH 646
Score = 64.5 bits (150), Expect = 7e-11
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 851 CKKRFSSTSNLKTHLRLHSGQKPYACDLCMQKFTQFVHLKLHKRLHTNDRPYVCQGCDKK 910
C KRF+ NLK+H+ H+ +P+ C +C + F + + H++LHT + + C C+++
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 911 YISASGLRTHWKT 923
+ L H+K+
Sbjct: 637 FARMDALNRHYKS 649
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 69.3 bits (162), Expect = 3e-12
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 851 CKKRFSSTSNLKTHLRLHSGQKPYACDLCMQKFTQFVHLKLHKRLHTNDRPYVCQGCDKK 910
C KR + N+++H++ H +PY CDLC F + LK H R+H N RPYVC+ C K+
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 911 YISASGLRTHWKTTSC 926
+ L H + C
Sbjct: 509 FNRLDALNRHKQRNIC 524
Score = 67.3 bits (157), Expect = 1e-11
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 821 NVCNKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDLCM 880
N CNK + +++ H H ++P++CD+CK F +LK HLR+H +PY C+ C+
Sbjct: 448 NGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CL 506
Query: 881 QKFTQFVHLKLHKR 894
++F + L HK+
Sbjct: 507 KRFNRLDALNRHKQ 520
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 785 DGKMHYECNVCCKTFGQLSNLKVHLRTHSGERPFKCNVCNKSFTQLAHLQKHHLVHTGEK 844
DGK N C K + N++ H++TH +RP++C++C F + L++H +H +
Sbjct: 440 DGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGR 499
Query: 845 PHQCDICKKRFSSTSNLKTH 864
P+ C+ C KRF+ L H
Sbjct: 500 PYVCE-CLKRFNRLDALNRH 518
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 64.9 bits (151), Expect = 6e-11
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 816 RPFKCNVCNKSFTQLAHLQKHHLVHTGEKPHQCDI--CKKRFSSTSNLKTHLRLHS 869
RP+KC +C K+F +L H +H HTGEKPH C C KRFS + L H R+H+
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 844 KPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDL--CMQKFTQFVHLKLHKRLHTN 898
+P++C +C K F + H+R H+G+KP+ C C ++F++ L H R+HTN
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 782 KKKDGKMHYECNVCCKTFGQLSNLKVHLRTHSGERPFKCNV--CNKSFTQLAHLQKHHLV 839
K D Y+C +C K F +L + H+RTH+GE+P C C K F++ L +H +
Sbjct: 18 KNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARI 77
Query: 840 HT 841
HT
Sbjct: 78 HT 79
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 872 KPYACDLCMQKFTQFVHLKLHKRLHTNDRPYVC--QGCDKKYISASGLRTHWK--TTSCK 927
+PY C LC + F + H H R HT ++P+VC GC K++ + L H + T +
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANS 83
Query: 928 PNNIEEVLAITNAANT 943
N A N+A +
Sbjct: 84 RRNAAAAAAANNSARS 99
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 687 LGSPPNTYSPTVTSTHQYDRSQNGQSNHHYPSSS--TSVITLKNCSQLSLIQNGNVGGQV 744
L S PN + +ST + + NG SN Y +SS T + K+ S SL VG
Sbjct: 287 LASVPNRGLTSNSSTGSFTKYTNGSSNSLYSNSSMQTPYLPSKSNSSTSLHSMYGVGTTA 346
Query: 745 LPP 747
P
Sbjct: 347 YAP 349
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 801 QLSNLKVHLRTHSGERPFKCNVCNKSFTQLAHLQKH-HLVHTGEKPHQCDICKKRFSSTS 859
Q SN K + G + F C C+K F + HL++H +HT EKP C IC KRFS
Sbjct: 406 QPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRD 464
Query: 860 NLKTHLRLHSGQKP-YAC 876
NL+ H RLH P AC
Sbjct: 465 NLRQHERLHVNASPRLAC 482
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 842 GEKPHQCDICKKRFSSTSNLKTHLR-LHSGQKPYACDLCMQKFTQFVHLKLHKRLHTNDR 900
G K C C K+F + +L+ H+R LH+ +KP+ C +C ++F++ +L+ H+RLH N
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS 477
Query: 901 P 901
P
Sbjct: 478 P 478
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 852 KKRFSSTSNLKTHLRLHSGQKPYACDLCMQKFTQFVHLKLHKR-LHTNDRPYVCQGCDKK 910
+++ SN KT + G K + C C +KF + HL+ H R LHT+++P+VC C K+
Sbjct: 401 RRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKR 459
Query: 911 YISASGLRTH 920
+ LR H
Sbjct: 460 FSRRDNLRQH 469
Score = 47.2 bits (107), Expect = 1e-05
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 692 NTYSPTVTSTHQYDRSQNGQSNHHYPSSSTSVITLKNCSQLSLIQNGNVGGQVLPPHGSV 751
N+Y+ + ST D Q + Y S T L + N + + G++
Sbjct: 338 NSYNGGIPSTSYNDTPQQSVTGS-YNSGETMSTYLNQTNTSGRSPNSMEATEQI---GTI 393
Query: 752 SPDGSCGLMMSPISPNSQASRGYRSLPYPLKKKDGKMHYECNVCCKTFGQLSNLKVHLRT 811
DGS Q S S+P + G + C C K F + +L+ H+R+
Sbjct: 394 GTDGSMKRRK-----RRQPSNRKTSVP----RSPGGKSFVCPECSKKFKRSEHLRRHIRS 444
Query: 812 -HSGERPFKCNVCNKSFTQLAHLQKHHLVHTGEKP 845
H+ E+PF C +C K F++ +L++H +H P
Sbjct: 445 LHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 788 MHYECNVCCKTFGQLSNLKVHLRTHSGERPFKCNV--CNKSFTQLAHLQKHHLVH 840
+ Y C C + F + S+LK+H +H+GERPF C+ C K+F +++++H +H
Sbjct: 466 VRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 818 FKCNVCNKSFTQLAHLQKHHLVHTGEKPHQCDI--CKKRFSSTSNLKTHLRLH 868
++C C + F++ + L+ H HTGE+P CD C K F+ SN++ H R+H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 874 YACDLCMQKFTQFVHLKLHKRLHTNDRPYVCQ--GCDKKYISASGLRTH 920
Y C C+Q F++ LK+H HT +RP+VC GC K + S +R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRH 516
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 846 HQCDICKKRFSSTSNLKTHLRLHSGQKPYACDL--CMQKFTQFVHLKLHKRLH 896
++C C + FS S+LK H H+G++P+ CD C + F +++ H+R+H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 816 RPFKCNVCNKSFTQLAHLQKHHLVHTGEKPHQCDI--CKKRFSSTSNLKTHLRLH 868
+ ++C C + F + H +H HTGEKP +C CKKRF+ L H+R H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 790 YECNVCCKTFGQLSNLKVHLRTHSGERPFKCNV--CNKSFTQLAHLQKHHLVH 840
YEC C + F + + H+R+H+GE+PF+C+ C K FT+ L +H H
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 844 KPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDL--CMQKFTQFVHLKLHKRLH 896
K ++C CK+ F + H+R H+G+KP+ C C ++FT+ L H R H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 872 KPYACDLCMQKFTQFVHLKLHKRLHTNDRPYVCQ--GCDKKYISASGLRTHWKT 923
K Y C C + F + H H R HT ++P+ C C K++ L H +T
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRT 55
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 763 PISPNSQASRGYRSLPYPLKKKDGKMHYECNVCCKTFGQLSNLKVHLRTHSGERPFKCNV 822
P++ ++ A + + P +K+ Y C C + F +L +LK H+R+H+ E+PF C+
Sbjct: 49 PVASSTAAKKDPNAPPQKVKQ------YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSE 102
Query: 823 -------CNKSFTQLAHLQKH-HLVHTGEKPHQ 847
C + F++ L +H +H +P +
Sbjct: 103 IDGLPTGCGRQFSRRDLLLRHQQKIHRNPQPRR 135
Score = 45.2 bits (102), Expect = 5e-05
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 872 KPYACDLCMQKFTQFVHLKLHKRLHTNDRPYVCQGCD 908
K Y C+ C + F + HLK H R HTN++P+ C D
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 816 RPFKCNVCNKSFTQLAHLQKHHLVHTGEKPHQCDI-------CKKRFSSTSNLKTH-LRL 867
+ + C C ++F +L HL++H HT EKP C C ++FS L H ++
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 868 HSGQKP 873
H +P
Sbjct: 128 HRNPQP 133
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 844 KPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDL-------CMQKFTQFVHLKLH-KRL 895
K + C+ C + F+ +LK H+R H+ +KP+ C C ++F++ L H +++
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 896 HTNDRP 901
H N +P
Sbjct: 128 HRNPQP 133
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 805 LKVHLRTHS-GERPFKCNV--CNKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNL 861
LK R H G+ F C C KSFT+ HL++H H K C C + F+ + L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 862 KTHLRLHSGQK 872
H++ QK
Sbjct: 72 NRHVQQMHLQK 82
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 780 PLKKKD-----GKMHYECNV--CCKTFGQLSNLKVHLRTHSGERPFKCNVCNKSFTQLAH 832
PLKK+ G + C C K+F + +L+ H RTH + F C+ CN++F +
Sbjct: 11 PLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDV 70
Query: 833 LQKH 836
L +H
Sbjct: 71 LNRH 74
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 861 LKTHLRLHS-GQKPYACDL--CMQKFTQFVHLKLHKRLHTNDRPYVCQGCDKKYISASGL 917
LK R H G + C C + FT+ HL+ H+R H N + + C C++ + + L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 918 RTHWKTTSCKPNNIEE 933
H + + N+ E
Sbjct: 72 NRHVQQMHLQKQNLSE 87
Score = 34.7 bits (76), Expect = 0.069
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 825 KSFTQLAHLQKHHLVHTGEKPHQCDI--CKKRFSSTSNLKTHLRLHSGQKPYACDLCMQK 882
+SFT+ ++ G+ C C K F+ +L+ H R H K ++C C +
Sbjct: 5 ESFTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRA 64
Query: 883 FTQFVHLKLH-KRLH 896
F + L H +++H
Sbjct: 65 FARSDVLNRHVQQMH 79
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 870 GQKPYACDL--CMQKFTQFVHLKLHKRLHTNDRPYVCQGCDKKYISASGLRTHWKTTSCK 927
G Y CD C + FT+ H + H R HTN + ++C C + + L H K
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72
Query: 928 PNN 930
N+
Sbjct: 73 QND 75
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 784 KDGKMHYECNV--CCKTFGQLSNLKVHLRTHSGERPFKCNVCNKSFTQLAHLQKH 836
++G + Y+C+ C K+F + + + H R+H+ + F C C+ SFT+ L +H
Sbjct: 11 QEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 814 GERPFKCNV--CNKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHL 865
G+ +KC+ C KSFT+ H ++H HT K C C F+ + L H+
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 834 QKHHLVHTGEKPHQCDI--CKKRFSSTSNLKTHLRLHSGQKPYACDLCMQKFTQFVHLKL 891
+K G+ ++CD C K F+ + + H R H+ K + C C FT+ L
Sbjct: 5 KKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNR 64
Query: 892 H---KRLHTND 899
H K + ND
Sbjct: 65 HVNQKHVKQND 75
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/59 (35%), Positives = 28/59 (47%)
Query: 848 CDICKKRFSSTSNLKTHLRLHSGQKPYACDLCMQKFTQFVHLKLHKRLHTNDRPYVCQG 906
CD C KRF+ NL H HS +P C C K + LK H + ND+ + +G
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSVIEEG 91
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 815 ERPFKCNVCNKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHL-RLHS 869
+R F C+ C K FT+ +L +H H+ +P C C+ + LK H+ R H+
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 863 THLRLHSGQKPYACDLCMQKFTQFVHLKLHKRLHTNDRPYVCQGCDKKYISASGLRTHWK 922
T L ++ + CD C ++FT+ +L HK H+ P C C+ K L+ H +
Sbjct: 20 TEPSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
Query: 923 TTSCKPNNIEE 933
+ IEE
Sbjct: 80 RFHNDKSVIEE 90
Score = 34.7 bits (76), Expect = 0.069
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 760 MMSPISPNS-QASRGYRSLPYPLKKKDGKMHYECNVCCKTFGQLSNLKVHLRTHSGERPF 818
M+ +S NS R L P D K + C+ C K F + NL H HS P
Sbjct: 1 MVDHVSENSTNVLSAKRKLTEP-SLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPI 59
Query: 819 KCNVCNKSFTQLAHLQKH 836
C C + L++H
Sbjct: 60 PCPYCEIKCKRKDLLKRH 77
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 805 LKVHLRTHSGERPFKCNV--CNKSFTQLAHLQKH-HLVHTGE 843
L HLR+H+GE+PF C+V C++SFT+ L KH VH +
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 750 SVSPDGSCGLMMSPIS--PNSQASRGYRSLPYPLKKKDGKMHYECNVCCKTFGQLSNLKV 807
S+S D S + SPI P S+ ++S L D +H+ N +SN+
Sbjct: 2 SISSDTSGSVPGSPIDLEPESETICHWQSCEQDLLTLDNLVHHIHNGTTSNLRLISNINS 61
Query: 808 HLRTHSGERP-FKC--NVC-NKSFTQLAH--LQKHHLVHTGEKPHQCDI--CKKRFSSTS 859
L RP + C + C K Q + L H HTGEKP C + C + F+ +
Sbjct: 62 ILDHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSD 121
Query: 860 NLKTHLR 866
L H+R
Sbjct: 122 ALAKHMR 128
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 859 SNLKTHLRLHSGQKP-YAC--DLCMQKF---TQFVHLKLHKRLHTNDRPYVCQ--GCDKK 910
SN+ + L ++P Y C D C +K T L H R HT ++P++C CD+
Sbjct: 57 SNINSILDHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRS 116
Query: 911 YISASGLRTHWKT 923
+ + L H +T
Sbjct: 117 FTRSDALAKHMRT 129
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 849 DICKKRFSSTSN--LKTHLRLHSGQKPYACDL--CMQKFTQFVHLKLHKR-LHTND 899
D +K TS L HLR H+G+KP+ C + C + FT+ L H R +H D
Sbjct: 79 DCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 35.9 bits (79), Expect = 0.030
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 843 EKPHQCDI--CKKRFSSTSNLKTHLRLHSGQKPYACDLCMQKFTQFVHLKLHKRLHTNDR 900
+KP++C + C K + + + LK H +LH P T H+ ++
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYH-KLHGHCSPIT--------TPTPAPIPHQGFVVENK 397
Query: 901 PYVCQGCDKKYISASGLRTH 920
PY C+ C K+Y + +GL+ H
Sbjct: 398 PYRCEVCSKRYKNLNGLKYH 417
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Query: 844 KPHQCDICKKRFSSTSNLKTHLRLHS 869
KP++C++C KR+ + + LK H R HS
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 31.5 bits (68), Expect = 0.64
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Query: 815 ERPFKCNV--CNKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQK 872
++P+KC V C+K++ L K+H +H H C + T H K
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGL-KYHKLHG----H----CSPITTPTPAPIPHQGFVVENK 397
Query: 873 PYACDLCMQKFTQFVHLKLHKRLHTN 898
PY C++C +++ LK H R H++
Sbjct: 398 PYRCEVCSKRYKNLNGLKYH-RTHSH 422
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Query: 790 YECNVCCKTFGQLSNLKVHLRTHS 813
Y C VC K + L+ LK H RTHS
Sbjct: 399 YRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 899 DRPYVCQ--GCDKKYISASGLRTHWKTTSCKP 928
D+PY C CDK Y + +GL+ H C P
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSP 378
>SPAPB1A10.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 497 VPHNM-PQNLSPPRRDPATSTVIVLESSQNTVVP 529
+P+N+ PQN S ++ P ++V+E SQN++VP
Sbjct: 61 LPYNLVPQNSSTSKKRPRAEDLLVIEPSQNSLVP 94
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 821 NVCNKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSG 870
N+ N + QL L KH L T + ++ K F SN+ +H LHSG
Sbjct: 852 NLENSTLVQLKQLSKHLLSETKQDESFSELAKI-FQEGSNITSHELLHSG 900
>SPBC23G7.09 |matmc_2|matmc|mating-type m-specific polypeptide
mc|Schizosaccharomyces pombe|chr 2|||Manual
Length = 181
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 527 VVPINKPYYEDGPLSPSPQPAFMRYSPPDTRILETILTGNRIDTNNNDPTRRQPNA 582
++P ++ Y DG + P+P + ++ ++ IL R DT + + T R PNA
Sbjct: 54 LIPNSQSYLLDGNSAQLPRPQPISFTLDQCKVPGYILKSLRKDTTSTERTPRPPNA 109
>SPBC1711.02 |matmc_1|matmc|mating-type m-specific polypeptide
mc|Schizosaccharomyces pombe|chr 2|||Manual
Length = 181
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 527 VVPINKPYYEDGPLSPSPQPAFMRYSPPDTRILETILTGNRIDTNNNDPTRRQPNA 582
++P ++ Y DG + P+P + ++ ++ IL R DT + + T R PNA
Sbjct: 54 LIPNSQSYLLDGNSAQLPRPQPISFTLDQCKVPGYILKSLRKDTTSTERTPRPPNA 109
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 243 VLGLTNAKELLETEIPSRRR-KRENSDKHDNQNVLIREDPRCIAKNERTIVRTDISTNI 300
V GL +A++ ++TE + R K++ + + +L+R RC A + + ++ST +
Sbjct: 378 VAGLYDAEDAVQTERERKERYKKQRAQAEREREILVRLSKRCCASSSSSSNSNNLSTGM 436
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 513 ATSTVIVLESSQNTVVPI-NKPYYEDGPLSPSPQPAFMRYSPPDTRILETILTGNRIDTN 571
A++TV V + ++ P+ N+P + +S + +S +T + +++ + ++
Sbjct: 180 ASNTVSVTSPASSSATPLPNQPSQQQFLVSKNDAFTTFVHSVHNTPMQQSMYVPQQQTSH 239
Query: 572 NNDPTRRQPNATPPPSSPTEMAYSYKKSQRY 602
++ + + +A PP SP M YSY + Q +
Sbjct: 240 SSGASYQNESANPPVQSP--MQYSYSQGQPF 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
Query: 241 KYVLGLTNAKELLETEIPSRRRKRENSDKHDNQNVLIREDPRCIAKNERTIVRTDISTNI 300
K + GL L +I +KR N N + ++ DP I + E + T +
Sbjct: 231 KKLAGLAQQNTELNEKIQLFEQKRSNYSSDGNISKILETDPTSIKELEEEVETQKRLTAL 290
Query: 301 VHNSDTPIINEQSASGSLLPVKMAHRENPTLIIHQHKESTSQLVIHQLENPRLQSNRSPI 360
+ + + +E +A L + + N T ++ +K+ QL+I + LQ +
Sbjct: 291 WESKSSELQSEVAALQEKLTSQQSLYNNVTEELNNNKQ---QLLISENSLRELQEKYDSV 347
Query: 361 QSHLRDVR 368
S L+ V+
Sbjct: 348 VSELQVVK 355
>SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit
Prp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 216 KEETIKKAYGLPPAPVHPEIAFNHMKYVLGLTNAKELLETEIPSRRRKRENSDKHDNQN 274
KE+ ++ G+ P P P++ +++ +VLG K+ + E R++ E +H+ +N
Sbjct: 315 KEKQDRQLLGIEP-PEPPKVKLSNLMHVLGDDAIKDPTKIEAEVRKQVEERRLRHEREN 372
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 9/89 (10%)
Query: 690 PPNTYSPTVTSTHQYDRSQNGQSNHHYPSSSTSVITLKNCSQLSLIQNGNVGGQVLPPHG 749
PP + S T T S G S+ PS+STS T S+ GN V P
Sbjct: 306 PPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTT-----STSIPPTGNSTTPVTP--- 357
Query: 750 SVSPDGSCGLMMSPISPNSQASRGYRSLP 778
P S +P P S +S G S P
Sbjct: 358 -TVPPTSTSSTSTPPPPASTSSTGTSSSP 385
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 395 YEHQLTPNDGSVRSDEGYHSNGYHDEFTPPEDSSDSDVE 433
+ H L N G+ + SNG H +F P E+ ++++ +
Sbjct: 171 HSHTLRGNQGNTAVSQENASNGVHSDFHPSEELNNANTD 209
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 115 RTPNKPNDKISWRYYWRIFIDSDYYYLDGSDTS-VANWMRYVASAYSLSVMNLVACQHQE 173
R N +D I++ + +F D+ Y +D + V+ + + S ++++ + V
Sbjct: 370 RDKNYDDDGITYLFDLDMFDDASEYTVDAQNYGDVSRFFNHSCSP-NIAIYSAVRNHGFR 428
Query: 174 HIY---FYTVRDIMPNEELMVWY--CKDFA 198
IY F+ ++DI P EEL Y KDF+
Sbjct: 429 TIYDLAFFAIKDIQPLEELTFDYAGAKDFS 458
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 29.1 bits (62), Expect = 3.4
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 11/128 (8%)
Query: 327 ENPTLIIHQHKESTSQLVIHQLENPRLQSNRSPIQSHLRDVRVSSPLTHHHDKPGNKSPM 386
E P + +KEST+ ++ LE P+ N + ++L D+ + HHD +S
Sbjct: 28 EEPEHHDNSNKESTNLDDLNMLEEPKYHDNSNKESTNLDDLNMLEE-PEHHDNSKKESTN 86
Query: 387 LTHCG---GPSY----EHQLTPNDGSVRSDEGYHSNGYHDEFTPPEDSSDSDVENYVLDC 439
L P + + T D S+E H + + E T ++S+ + EN
Sbjct: 87 LDDSNMLEEPKHHDNSNKESTNLDDLNMSEEPKHHDSSNKESTNLDNSNMDESEN---QK 143
Query: 440 SNKTNEPK 447
+ K EPK
Sbjct: 144 NFKIEEPK 151
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 520 LESSQNT-VVPINKPYYEDGPLSPSPQPAFMR 550
+ S QN +PINKP+ D PL SP R
Sbjct: 636 ITSHQNLHTIPINKPFTSDRPLYSSPNDTLER 667
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 689 SPPNTYSPTVTSTHQYDRSQNGQSNHHY-PSSSTSVITLKNCS 730
SP +T S TS + + G S H+ P S SV + +CS
Sbjct: 124 SPTSTNSSVATSLNYQSSRETGISKDHWKPDSDVSVCSFPSCS 166
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 529 PINKPYYEDGPLSPSPQPAFMRYSPPDTRILETILTGNRIDTNNNDPTRRQP 580
P++K Y +G L+P P RY+ + + +G D N + R P
Sbjct: 62 PVSKNYESEGRLTPPPVSMGYRYARSSKQSFQREDSGYNDDVVTNSSSHRTP 113
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 403 DGSVRSDEGYHSNGYHDEFTPPEDSSDSDVENYV 436
D +V +D GY+ GY + PP D+S + +YV
Sbjct: 538 DTNVPADNGYYQQGYGNVMMPP-DASYTGTGSYV 570
>SPBC4F6.05c |||lectin |Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 124 ISWRYYWRIFIDSDYYYLDGSDTSVANWMRYVASAYSLSVMNLVACQHQEHIYFYTVRDI 183
+ W++Y + DS Y YL D++ A S +S SV+ V Q + +
Sbjct: 37 VEWKWYGSVDEDSGYVYLTSKDSNEAR----SGSLWSTSVLRQVGWQLSTSFVAHVSEN- 91
Query: 184 MPNEELMVWY 193
N +WY
Sbjct: 92 -ENTFFAIWY 100
>SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 27.9 bits (59), Expect = 7.9
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 348 LENPRLQSNRSPIQSHLRDVRVSSPLTHHHDKPGNKSPMLTHCG--GPSYEHQLTPNDGS 405
L+ P +S+ +PI R + V P H K HC G SYE P S
Sbjct: 68 LKRPAPESHDAPIG---RRLMVDDPRLIKH----GKYDFSRHCTDYGHSYEW---PYFRS 117
Query: 406 VRSDEG-YHSNGYHDEFTPPEDSSDSDVENY 435
+R + YH++G + E PP S +D +Y
Sbjct: 118 LRRESMLYHTSGSYPESQPPYSSYSTDAPHY 148
>SPAC24H6.02c |||TIM23 translocase complex subunit
Tim15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 175
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 818 FKCNVCNKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLK 862
F C VCN T+ H H G QC CK R +LK
Sbjct: 80 FTCTVCN---TRSNHNFSKQAYHNGTVLVQCPKCKNRHLMADHLK 121
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.130 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,093,781
Number of Sequences: 5004
Number of extensions: 230446
Number of successful extensions: 636
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 537
Number of HSP's gapped (non-prelim): 80
length of query: 1056
length of database: 2,362,478
effective HSP length: 80
effective length of query: 976
effective length of database: 1,962,158
effective search space: 1915066208
effective search space used: 1915066208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
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