GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000318-TA|BGIBMGA000318-PA|undefined
         (85 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B8EB3 Cluster: UPI00015B8EB3 related cluster; n...    31   4.6  
UniRef50_UPI0000D9B00A Cluster: PREDICTED: hypothetical protein;...    31   6.1  
UniRef50_Q3JIV0 Cluster: Putative uncharacterized protein; n=1; ...    31   6.1  
UniRef50_Q2HAD2 Cluster: Putative uncharacterized protein; n=1; ...    31   6.1  
UniRef50_Q4SNK2 Cluster: Chromosome 15 SCAF14542, whole genome s...    30   8.0  
UniRef50_Q3J9T3 Cluster: FAD linked oxidase-like precursor; n=1;...    30   8.0  
UniRef50_Q1D1R1 Cluster: Putative uncharacterized protein; n=1; ...    30   8.0  
UniRef50_Q1AW80 Cluster: SMC protein-like protein; n=1; Rubrobac...    30   8.0  
UniRef50_A7E876 Cluster: Predicted protein; n=1; Sclerotinia scl...    30   8.0  

>UniRef50_UPI00015B8EB3 Cluster: UPI00015B8EB3 related cluster; n=1;
           unknown|Rep: UPI00015B8EB3 UniRef100 entry - unknown
          Length = 289

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 20  ARSSSFTR-STEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGVGAPRSVA 78
           A+++SF   S    R GA+A+  P+RTLC   RA         A     SG V A  SV+
Sbjct: 75  AKANSFALISVSGARVGAKAKFAPKRTLCVLDRASSDGLDSGLASASAGSGAVWASVSVS 134


>UniRef50_UPI0000D9B00A Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 128

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 21  RSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGVGAPRS 76
           RS   T +  +Q  G RAQ +P       SR GR +P   R   +QL  G   PR+
Sbjct: 61  RSRRVTPNNSKQNQGTRAQPSP-------SRRGRRAPCARRLPAFQLRRGAAEPRA 109


>UniRef50_Q3JIV0 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia pseudomallei 1710b|Rep: Putative
           uncharacterized protein - Burkholderia pseudomallei
           (strain 1710b)
          Length = 584

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 2   ALGKGGL-VRCGGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMN 60
           A+G G    R G     S     SFT +    RC +  ++   RT C+ S AGR + +  
Sbjct: 498 AIGPGACRARRGTARPASREMPCSFTTNACNTRCASPRRIPASRTCCSSSSAGRRASSRP 557

Query: 61  R 61
           R
Sbjct: 558 R 558


>UniRef50_Q2HAD2 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 356

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 22  SSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPT 58
           S + +   ++   G R QVTP+    TDSR   TSPT
Sbjct: 182 SDADSHPADQNGDGTRQQVTPESEFKTDSRTTPTSPT 218


>UniRef50_Q4SNK2 Cluster: Chromosome 15 SCAF14542, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 15 SCAF14542, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 294

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 35  GARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGVGAP 74
           G+RA + P + LC  SR G +  +++R +  Q   G GAP
Sbjct: 198 GSRAGLVPGQDLCGGSR-GASQDSLDRTVLLQTLQGPGAP 236


>UniRef50_Q3J9T3 Cluster: FAD linked oxidase-like precursor; n=1;
           Nitrosococcus oceani ATCC 19707|Rep: FAD linked
           oxidase-like precursor - Nitrosococcus oceani (strain
           ATCC 19707 / NCIMB 11848)
          Length = 452

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 15/44 (34%), Positives = 20/44 (45%)

Query: 38  AQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGVGAPRSVAERS 81
           A V     +  D R  R SP  N A+F+   GG+G    + E S
Sbjct: 132 AHVIELELILADGRRQRCSPNQNEALFWATVGGMGLTGIITEVS 175


>UniRef50_Q1D1R1 Cluster: Putative uncharacterized protein; n=1;
          Myxococcus xanthus DK 1622|Rep: Putative
          uncharacterized protein - Myxococcus xanthus (strain DK
          1622)
          Length = 446

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)

Query: 3  LGKGGLVRCGGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRA 62
          +G   LVRC GP+ +   RS   +  + E     R+ + P   L + SR+ R +  +   
Sbjct: 1  MGAKALVRCPGPLAIPTIRSPYLSTQSPE-----RSNLRPSSELRSASRSARAALLLAAV 55

Query: 63 IFYQLSGGVGAPRSVAERS 81
          +    +    A  SVA +S
Sbjct: 56 MHLATASTAFAAPSVANKS 74


>UniRef50_Q1AW80 Cluster: SMC protein-like protein; n=1; Rubrobacter
           xylanophilus DSM 9941|Rep: SMC protein-like protein -
           Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
          Length = 1091

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 17  VSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGVGAPRS 76
           V+++R  S    TE +  GARA++   R +  ++  GR S     A+   ++GG  A R 
Sbjct: 97  VAISRRISRDGRTEYRVGGARARLADVRVVAGEAGLGRHSILRQGAVDAIVAGGAAACRQ 156

Query: 77  VAERS 81
             E S
Sbjct: 157 ALEES 161


>UniRef50_A7E876 Cluster: Predicted protein; n=1; Sclerotinia
          sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
          sclerotiorum 1980
          Length = 313

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 37 RAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGVGAP 74
          RA+    R LCT  + G+TS  +N  +  ++S GV AP
Sbjct: 24 RARAEASRRLCTQGQEGKTSQNVN-LVLKEMSIGVKAP 60


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.129    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,971,854
Number of Sequences: 1657284
Number of extensions: 2625416
Number of successful extensions: 5869
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 5865
Number of HSP's gapped (non-prelim): 9
length of query: 85
length of database: 575,637,011
effective HSP length: 63
effective length of query: 22
effective length of database: 471,228,119
effective search space: 10367018618
effective search space used: 10367018618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)