Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000318-TA|BGIBMGA000318-PA|undefined
(85 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 26 2.9
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 26 2.9
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 26 2.9
Z92838-10|CAB07412.2| 312|Caenorhabditis elegans Hypothetical p... 26 2.9
Z92832-9|CAB07377.2| 312|Caenorhabditis elegans Hypothetical pr... 26 2.9
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 26 2.9
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 26 2.9
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 26 2.9
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 26 2.9
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 26 2.9
AL110471-1|CAB63307.1| 171|Caenorhabditis elegans Hypothetical ... 26 3.8
U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical pr... 25 6.6
AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion transpo... 25 6.6
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 12 GGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGV 71
GG S + SSS T + Q+ G++ P + + S N + L GGV
Sbjct: 601 GGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDENNSENQNGNV--PLIGGV 658
Query: 72 GAPRSVA 78
G S A
Sbjct: 659 GPQTSPA 665
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 12 GGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGV 71
GG S + SSS T + Q+ G++ P + + S N + L GGV
Sbjct: 635 GGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDENNSENQNGNV--PLIGGV 692
Query: 72 GAPRSVA 78
G S A
Sbjct: 693 GPQTSPA 699
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 12 GGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGV 71
GG S + SSS T + Q+ G++ P + + S N + L GGV
Sbjct: 731 GGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDENNSENQNGNV--PLIGGV 788
Query: 72 GAPRSVA 78
G S A
Sbjct: 789 GPQTSPA 795
>Z92838-10|CAB07412.2| 312|Caenorhabditis elegans Hypothetical
protein F31D4.1 protein.
Length = 312
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 1 MALGKGGLVRCGGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMN 60
+A+ K ++RC + +S +++ T E+ C R+Q+ DS + P +
Sbjct: 201 VAMWKLDVMRCPLLLTISKIGTANLVDCTPEEECCIRSQLLVGLAAIADS-SENNEPNYD 259
Query: 61 RAIFYQLSGGVGAPRSVAE 79
Q+ GG+ S+ E
Sbjct: 260 VTCVKQVGGGLLEMESIQE 278
>Z92832-9|CAB07377.2| 312|Caenorhabditis elegans Hypothetical
protein F31D4.1 protein.
Length = 312
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 1 MALGKGGLVRCGGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMN 60
+A+ K ++RC + +S +++ T E+ C R+Q+ DS + P +
Sbjct: 201 VAMWKLDVMRCPLLLTISKIGTANLVDCTPEEECCIRSQLLVGLAAIADS-SENNEPNYD 259
Query: 61 RAIFYQLSGGVGAPRSVAE 79
Q+ GG+ S+ E
Sbjct: 260 VTCVKQVGGGLLEMESIQE 278
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 12 GGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGV 71
GG S + SSS T + Q+ G++ P + + S N + L GGV
Sbjct: 601 GGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDENNSENQNGNV--PLIGGV 658
Query: 72 GAPRSVA 78
G S A
Sbjct: 659 GPQTSPA 665
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 12 GGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGV 71
GG S + SSS T + Q+ G++ P + + S N + L GGV
Sbjct: 635 GGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDENNSENQNGNV--PLIGGV 692
Query: 72 GAPRSVA 78
G S A
Sbjct: 693 GPQTSPA 699
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 12 GGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGV 71
GG S + SSS T + Q+ G++ P + + S N + L GGV
Sbjct: 731 GGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDENNSENQNGNV--PLIGGV 788
Query: 72 GAPRSVA 78
G S A
Sbjct: 789 GPQTSPA 795
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 12 GGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGV 71
GG S + SSS T + Q+ G++ P + + S N + L GGV
Sbjct: 635 GGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDENNSENQNGNV--PLIGGV 692
Query: 72 GAPRSVA 78
G S A
Sbjct: 693 GPQTSPA 699
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 12 GGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLCTDSRAGRTSPTMNRAIFYQLSGGV 71
GG S + SSS T + Q+ G++ P + + S N + L GGV
Sbjct: 731 GGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDENNSENQNGNV--PLIGGV 788
Query: 72 GAPRSVA 78
G S A
Sbjct: 789 GPQTSPA 795
>AL110471-1|CAB63307.1| 171|Caenorhabditis elegans Hypothetical
protein T06D10.1 protein.
Length = 171
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 28 STEEQRCGARAQVTPQRTLCTDSR 51
ST EQ C + QVTP+R T R
Sbjct: 135 STNEQPCLDKLQVTPRRRRATSCR 158
>U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical
protein F14D12.5 protein.
Length = 652
Score = 25.0 bits (52), Expect = 6.6
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 7 GLVRCGGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLC 47
G + G S+SF+R+ +R GA+ Q++ + C
Sbjct: 355 GFINIGSSFFSVFPTSASFSRTLVNERSGAKTQLSGITSAC 395
>AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion
transporter SULP-2 protein.
Length = 652
Score = 25.0 bits (52), Expect = 6.6
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 7 GLVRCGGPVVVSLARSSSFTRSTEEQRCGARAQVTPQRTLC 47
G + G S+SF+R+ +R GA+ Q++ + C
Sbjct: 355 GFINIGSSFFSVFPTSASFSRTLVNERSGAKTQLSGITSAC 395
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.129 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,831,585
Number of Sequences: 27539
Number of extensions: 55392
Number of successful extensions: 118
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 115
Number of HSP's gapped (non-prelim): 13
length of query: 85
length of database: 12,573,161
effective HSP length: 64
effective length of query: 21
effective length of database: 10,810,665
effective search space: 227023965
effective search space used: 227023965
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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