Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000317-TA|BGIBMGA000317-PA|undefined
(161 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0311 - 29139883-29140359,29140641-29140788,29140883-291409... 36 0.016
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867... 32 0.25
07_01_0505 - 3759254-3759490,3759846-3759989,3760135-3760347,376... 31 0.44
05_01_0511 + 4256220-4256828,4256920-4257175,4257247-4257309,425... 31 0.44
01_05_0063 + 17764004-17764480 29 1.8
06_03_0305 + 19388745-19388963,19389069-19389209,19389799-193898... 27 5.4
06_03_0244 + 18637406-18637511,18637576-18638123 27 5.4
02_05_0288 - 27549718-27549940,27550025-27550102,27550282-275506... 27 5.4
02_02_0691 + 12999452-12999820 27 5.4
02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993... 27 5.4
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239... 27 7.2
10_03_0035 - 7265037-7265455,7265684-7265812,7265909-7265951,726... 27 7.2
07_03_0615 + 19983003-19983238,19983297-19983558,19983651-199839... 27 7.2
06_03_0246 + 18672704-18673111,18674069-18674164,18674362-186745... 27 7.2
06_01_0191 + 1478267-1478929,1480579-1480789,1482625-1482925,148... 27 7.2
04_03_0589 - 17604361-17604800,17604887-17604949,17605025-176052... 27 7.2
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 27 7.2
10_08_0394 + 17535525-17535656,17537205-17538371,17540558-17541448 27 9.5
10_07_0084 + 12748685-12749146 27 9.5
09_04_0117 + 14813472-14814113,14814194-14814404,14814552-148148... 27 9.5
06_03_1157 - 28074675-28074710,28075318-28075514,28075676-280758... 27 9.5
06_03_1135 + 27896696-27897178 27 9.5
06_03_0913 + 25913231-25913609,25913702-25913775,25914400-259145... 27 9.5
>05_07_0311 -
29139883-29140359,29140641-29140788,29140883-29140959,
29141227-29141387,29141785-29142803,29142905-29142996,
29143117-29143256,29143397-29143574
Length = 763
Score = 35.9 bits (79), Expect = 0.016
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 69 MVRSERERLHTETRRSPPEEKRPPLVPLPAFQQAFGSTE 107
M RS + L RSPP+E + PL PLP + G TE
Sbjct: 157 MKRSRPKVLRLNLVRSPPKESKSPLPPLPELSDSVGETE 195
>11_04_0307 +
16185405-16185713,16185847-16185942,16186626-16186730,
16186938-16187090,16188395-16188478,16188566-16188694,
16188986-16189165,16189555-16189677,16189678-16189794,
16189889-16190053
Length = 486
Score = 31.9 bits (69), Expect = 0.25
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 85 PPEEKRPPLVPLPAFQQAFGSTEIGKFAEAFSRAEIALDDVPG 127
PP K PP VP P+++QA GS+ + + E +V G
Sbjct: 46 PPPPKPPPTVPPPSYEQAVGSSRRARSEAGWEEEEEEDGEVGG 88
>07_01_0505 -
3759254-3759490,3759846-3759989,3760135-3760347,
3760439-3760990,3761339-3761806,3761959-3762023,
3762133-3762265,3763798-3764022
Length = 678
Score = 31.1 bits (67), Expect = 0.44
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 17 YQGPHMNVQNYLSQDGRSATPYPMYGDSSFNGESGARHGNSTEYTVSESRAE-MVRSERE 75
Y P NY +Q R T YP Y FNG+ + T S S+++ R++
Sbjct: 235 YGRPSGRFGNYQNQTNR--TTYPCYSSQIFNGKQQKLPTGNRSLTTSNSKSKGQSRNQNT 292
Query: 76 RLHTETRRSPPEEKRPPLV 94
H ++P PP +
Sbjct: 293 YPHLMGLQTPTSPLGPPSI 311
>05_01_0511 +
4256220-4256828,4256920-4257175,4257247-4257309,
4257397-4257491
Length = 340
Score = 31.1 bits (67), Expect = 0.44
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 84 SPPEEKRPPLVPLPAFQQAFGSTEIGKFAEAFSRAEIA 121
+PP PP+VP F Q FG+T+ F++A A A
Sbjct: 296 TPPSTSTPPVVPPTGFAQ-FGTTQAAHFSQAAGSASQA 332
>01_05_0063 + 17764004-17764480
Length = 158
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 63 SESRAEMVRSERERLHTETRRSPPEEKRPPLVP 95
S + AEM+ +E+E L RRS ++ PP P
Sbjct: 17 SSTAAEMIVTEQEHLQPRHRRSRKRDRPPPTPP 49
>06_03_0305 +
19388745-19388963,19389069-19389209,19389799-19389836,
19390161-19390227,19392057-19392467
Length = 291
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 29 SQDGRSATPYPMYGDSSFNGESGARHGNSTEYTVSESRAEMVRSERERL 77
S G SA P+P++ + + A + TE T E E +RL
Sbjct: 214 SSQGSSANPFPIHSSGTKSSRLNALQSSETEVTEFTQLKEAYTEECDRL 262
>06_03_0244 + 18637406-18637511,18637576-18638123
Length = 217
Score = 27.5 bits (58), Expect = 5.4
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 40 MYGDS---SFNGESGARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPEEKRPPLVPL 96
MYG S S A HG +T Y V +S E+ E E R P + PL
Sbjct: 118 MYGSERHPSIPCASSAAHGMATPYCVRQSFGEIGEKETEPREGTKRPLLPRYAKLQFYPL 177
Query: 97 P 97
P
Sbjct: 178 P 178
>02_05_0288 -
27549718-27549940,27550025-27550102,27550282-27550674,
27550752-27551347,27552232-27552978
Length = 678
Score = 27.5 bits (58), Expect = 5.4
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 42 GDSSFNGESGARHGNSTEYTVSESRAEMVRSERERLHTETRRSPP-EEKRPPLVPLPA 98
GDS+ A +EYT E +R RERL R P E+ LVP P+
Sbjct: 110 GDSAATRRYQACPARYSEYTPCEDVKRSLRYPRERLVYRERHCPTGRERLRCLVPAPS 167
>02_02_0691 + 12999452-12999820
Length = 122
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 48 GESGARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPE 87
GE+G +H + +E+R E RER H R+ E
Sbjct: 71 GEAGRQHAGAAAAAEAEARCETADRARERRHGIGRKEDEE 110
>02_01_0015 -
98311-98412,98635-98707,98830-98921,99139-99230,
99363-99432,99683-99781,100008-100093,100541-100655,
100853-100918,101064-101143,101226-101301,
101915-102151,102559-102590,102993-103047,
103384-103498,104497-104579,105182-105232,
105740-105802,105945-106010,106144-106279,
106503-106591,106844-106964,107138-107340,107434-107820
Length = 862
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 82 RRSPPEEKRPPLVPLP 97
RR+PP RPP PLP
Sbjct: 26 RRNPPRSARPPPTPLP 41
>11_01_0319 -
2396835-2396951,2397035-2397105,2397219-2397297,
2397417-2397458,2397670-2397723,2397836-2397868,
2397959-2398039,2398144-2398230,2398313-2398388,
2398633-2398808,2398912-2399034,2399249-2399361,
2399521-2399632,2400054-2400273,2401986-2402314,
2402408-2402713,2403580-2403878,2404079-2404181,
2404266-2404369,2404840-2404906,2404911-2405076,
2405241-2405956
Length = 1157
Score = 27.1 bits (57), Expect = 7.2
Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 2/96 (2%)
Query: 44 SSFNGESGARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPEEKRPPLVPLPAFQQAF 103
SS + +R E + R + R +R H E RR P+ ++ P P P +
Sbjct: 44 SSSGDDDRSRRHRHDESSRRRQRDQSHRRDRGG-HDERRRRSPQRRKEPTPPPPLLPEMI 102
Query: 104 GSTEIGKFAEAFSRAEIALDDVPGDNFSYDSFQEWD 139
G + F A++ + + Y WD
Sbjct: 103 PGRTGGIYIPPFRMAQMMREVEDKSSAEYQRL-SWD 137
>10_03_0035 -
7265037-7265455,7265684-7265812,7265909-7265951,
7266321-7266344
Length = 204
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 80 ETRRSPPEEKRPPLVPLPAFQQAFGS 105
E R PP PP P PA + AFG+
Sbjct: 115 EKNRVPPPPPPPPPQPAPAARAAFGT 140
>07_03_0615 +
19983003-19983238,19983297-19983558,19983651-19983906,
19983982-19984044,19984131-19984570
Length = 418
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 84 SPPEEKRPPLVPLPAFQQAFGSTEIGKFAEAFSRAEIA 121
+PP RP +VP F Q F T+ F++A A A
Sbjct: 259 TPPSSARPSVVPPTGFAQ-FAMTQAAHFSQAAGSASQA 295
>06_03_0246 +
18672704-18673111,18674069-18674164,18674362-18674571,
18675780-18675851,18675898-18675945
Length = 277
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 53 RHGNSTEYTVSESRAEMVRSERERLHTETRRSPPEEKRPPLVPLPAFQQAFGSTEIG 109
+H +ST T+ + R S + P E R P VP ++ FGS + G
Sbjct: 22 QHASSTVKTLDDRRPAGTSSSAGETEPKAAVEPQEYPRRPGVPDCSYYVEFGSCKFG 78
>06_01_0191 +
1478267-1478929,1480579-1480789,1482625-1482925,
1483217-1483612,1483993-1484070,1484166-1484373
Length = 618
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 58 TEYTVSESRAEMVRSERERL-HTETRRSPPEEKRPPLVPLP 97
+E+T E + +R R R + E PP E+R LVP P
Sbjct: 95 SEHTPCEGQRWSLRQPRRRFAYRERHCPPPAERRRCLVPAP 135
>04_03_0589 -
17604361-17604800,17604887-17604949,17605025-17605280,
17605373-17605634,17605739-17605885,17606118-17606236,
17606373-17606531,17606911-17606947,17607023-17607174
Length = 544
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 84 SPPEEKRPPLVPLPAFQQAFGSTEIGKFAEAFSRAEIA 121
+PP RP +VP F Q F T+ F++A A A
Sbjct: 385 TPPSSARPSVVPPTGFAQ-FAMTQAAHFSQAAGSASQA 421
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 51 GARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPEEKRPPLVPLPAFQQAFGS 105
G+R + + V E R +V +ER R P + PP P F + GS
Sbjct: 1061 GSRRRATAGFPVEEKRPRVVAEAQERETGPQIRPPCRRRSPPPPPPLIFWEKMGS 1115
>10_08_0394 + 17535525-17535656,17537205-17538371,17540558-17541448
Length = 729
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 11 PHMWTPYQGPHMNVQNYLSQDGRSATPYPMYGDSSFNGESGARH 54
PH P++G +N + + G S +P Y D++ G GARH
Sbjct: 478 PHPDFPFEGHLLNPIFHGNPLGPSNSPLCCYPDTAPAGIQGARH 521
>10_07_0084 + 12748685-12749146
Length = 153
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 50 SGARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPEEKRPPLV 94
S +R + ++ ++S S R E PPE+K PPL+
Sbjct: 20 SSSRRRSPLRFSQAQSAGRKQPSATSRRPGEAAAPPPEKKAPPLL 64
>09_04_0117 +
14813472-14814113,14814194-14814404,14814552-14814846,
14815059-14815448,14815528-14815605,14815692-14815926
Length = 616
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 58 TEYTVSESRAEMVRSERERLHTETRRSPPE-EKRPPLVPLP 97
T+YT + + ++ RE ++ R PP+ EK L+P P
Sbjct: 91 TDYTPCQDQNRAMKFPRENMNYRERHCPPQKEKLHCLIPPP 131
>06_03_1157 -
28074675-28074710,28075318-28075514,28075676-28075875,
28076190-28076287,28076798-28076854,28076952-28077010,
28077705-28077738,28077840-28077890
Length = 243
Score = 26.6 bits (56), Expect = 9.5
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 37 PYPMYGDSSFNGESGARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPEEKRPPLVPL 96
PY Y S + H + + +V+ S +E R+ ++R + R P EK P L
Sbjct: 133 PYNAYEMSP--SDQRQNHETTRKRSVALSTSEEGRNGKKRRESYDNRDPMSEKYRPEDAL 190
Query: 97 PAFQQAFGS 105
FQ + G+
Sbjct: 191 EPFQSSKGT 199
>06_03_1135 + 27896696-27897178
Length = 160
Score = 26.6 bits (56), Expect = 9.5
Identities = 23/92 (25%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Query: 15 TPYQGPHMNVQNYLSQDGRSATP--YPMYGDSSFNGESGARHGNSTEYTVSESRAEMVRS 72
+P H Q L R ++P P++ D + R G S+ A +RS
Sbjct: 7 SPMDCHHHRRQLLLRSPSRRSSPPGAPVHADERLHHHRFLRPGALARLRDSKVIARSLRS 66
Query: 73 ERERLHTETRRSPPEEKRPPLVPLPAFQQAFG 104
SPP PP P P A G
Sbjct: 67 AAAAAAVAVPASPPANTLPPSSPPPTAAAAAG 98
>06_03_0913 +
25913231-25913609,25913702-25913775,25914400-25914540,
25914834-25914946,25915359-25915491,25916213-25916351,
25916428-25916527,25916906-25916963,25917122-25917199,
25917278-25917376,25917657-25917735,25917826-25917974,
25918529-25918834,25918994-25919032
Length = 628
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 45 SFNGESGARHGNSTEYTVSESRA 67
S NGE + HGN T ++ +ES A
Sbjct: 587 SQNGEGPSHHGNGTGHSCAESHA 609
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.129 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,635,155
Number of Sequences: 37544
Number of extensions: 237380
Number of successful extensions: 550
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 534
Number of HSP's gapped (non-prelim): 24
length of query: 161
length of database: 14,793,348
effective HSP length: 77
effective length of query: 84
effective length of database: 11,902,460
effective search space: 999806640
effective search space used: 999806640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)
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