Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000317-TA|BGIBMGA000317-PA|undefined
(161 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 31 0.34
SB_59614| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 31 0.60
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_29019| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_31762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_17985| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_45877| Best HMM Match : Borrelia_orfA (HMM E-Value=0.23) 27 5.6
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_11187| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-10) 27 7.4
SB_15652| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57) 27 9.8
SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5) 27 9.8
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 27 9.8
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_48999| Best HMM Match : 7tm_1 (HMM E-Value=2.3e-08) 27 9.8
SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086) 27 9.8
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18) 27 9.8
SB_1700| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 31.5 bits (68), Expect = 0.34
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 56 NSTEYTVSESRAEMV--RSERERLHTE----TRRSPPEEKRPPLVPLPAFQQA 102
+S + S RAE+ ++R R H+E ++SP E R P PLP+ Q++
Sbjct: 1184 SSVSFPQSNGRAEVAVKTAKRRRTHSERGSPAQQSPSESTRDPSAPLPSAQES 1236
>SB_59614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 30.7 bits (66), Expect = 0.60
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 105 STEIGKFAEAFSRAEIALDDVPGDNFSYDSFQEW-DGPLEPHWSSQPTSRE 154
ST++ E S + + GD Y+S W D P + W+ +P+ R+
Sbjct: 138 STQVPSITECPSDSVTGRQTLHGDGIEYNSLNRWFDKPNQASWTRRPSVRD 188
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 30.7 bits (66), Expect = 0.60
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 10 EPHMWTPYQGPHMNVQNYLSQD--GRSATPYPMYGDSSFNGE---SGARHGNSTEYTVSE 64
EP+ T G + + N+ +++ + + + +S NG+ G S+ + +E
Sbjct: 350 EPNYETIQPGDYETIPNFPAKETKAKKIVDFNKFSESD-NGDVNLDGIEDAKSSNPSGNE 408
Query: 65 SRAEMVRSERERLHTETRRSPPEEKRPPLVPLPAFQQAFGSTEIGK 110
S R E + T+ + EE + L + AF+ FGS E K
Sbjct: 409 SG--FARCENKTRMTQLHPAASEESKDTLASINAFESEFGSDEFSK 452
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 53 RHGNSTEYTVSESRAEMVR----SERERLHTETRRSPPEEKRPPL 93
RH ++Y A +V+ S R LH E +RSPPEE+R L
Sbjct: 1252 RHSFHSDYMSRNKEAVLVKPAWSSSRSSLHDE-QRSPPEEQRESL 1295
>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 29 SQDGRSATPYPMYGDSSFNGESGARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPEE 88
+ +G+S+T Y DS+ G S A + +E S R+++ R ++++ +++
Sbjct: 530 NNEGKSSTLYGQESDSNNEGMSDAEELSDSE-LASSGRSKVKRKKKKKCKSKSPTKADSP 588
Query: 89 KRP 91
+RP
Sbjct: 589 QRP 591
>SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1652
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 44 SSFNGESGARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPEEKRPPLVPLPAFQ 100
S +GE + ++ YT S S+ +V R R H + EK LV A++
Sbjct: 838 SERHGEHSLINSSNHSYTQSNSKNTLVARSRRRSHARSTGDEETEKETGLVTPEAYE 894
>SB_29019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 71 RSERERLHTETRRSPPEEKRPPLVP 95
+SE+ER+ T R+ PE+ PP+ P
Sbjct: 344 KSEKERMVMPTERTIPEDDSPPVSP 368
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 52 ARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPEEKRPPLVPLPAFQQAFGSTEI 108
A+ G+S +++R E ++ + ERL+ + R++ EE P + A Q + E+
Sbjct: 1019 AKSGSSDALAAAKAREENLKQQIERLNEDLRKA-KEEFTPEMRHFDALQSKIAAMEL 1074
>SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 7 AYCEPHMWTPYQGPHMNVQN----YLSQDGRSATPYPMYGDSSFNGES 50
AY +P P P MN N Y SQ G + P P Y +S F G S
Sbjct: 215 AYWQPAS-QPSAPPLMNDPNQAPPYYSQQGSAYPPPPSYAESVFGGAS 261
>SB_31762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 141 PLEPHWSSQPTSREIKCEEN 160
P +P WS+ P +I CE N
Sbjct: 431 PTDPFWSTYPPDADISCEAN 450
>SB_17985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 818
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 56 NSTEYTVSESRAEMVRSERERLHTETRRSPPEEKRPPLVPLPAFQ 100
+ST+ +S S E V RE ++ +R+ + PL+P P+F+
Sbjct: 480 DSTQSRIS-SLQEQVYKYREHIYFLQQRAKQDNPGSPLIPTPSFE 523
>SB_45877| Best HMM Match : Borrelia_orfA (HMM E-Value=0.23)
Length = 734
Score = 27.5 bits (58), Expect = 5.6
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 47 NGESGARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPEEKRPPLVPLPAFQQAFGST 106
N + + NS+ +++ E + + L + T PE+ RP VP+ Q +
Sbjct: 280 NALNAGKQRNSSAKNETKTHTEDAKLDDSELESST----PEDGRPKTVPVKPTQSPVPTP 335
Query: 107 EIGKFAEAFSR-AEIALDDVP 126
E+ K A S ++ +D+P
Sbjct: 336 EVPKTAMTRSEFTQVTSNDLP 356
>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 30 QDGRSATPYPMYGDSSFNGESGARHGNSTEYTVSESRAEMVRSERERLHTETRRSPPE-E 88
QD ATP+ Y D + E GN+T+ S + + + + SPP+ +
Sbjct: 78 QDSPLATPF--YEDQPLHHEPELMEGNNTQQRQSNGHFTPLENSYQPVELFAPNSPPKPQ 135
Query: 89 KRPPLVPLPA 98
+ P P P+
Sbjct: 136 QNQPKPPKPS 145
>SB_11187| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-10)
Length = 1163
Score = 27.1 bits (57), Expect = 7.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 128 DNFSYDSFQEWDGPLEPHW 146
D++SY F WD P + W
Sbjct: 423 DHYSYPGFARWDNPHQMQW 441
>SB_15652| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 689
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 70 VRSERERLHTETRRSPPEEKRPPLVPLP 97
+R RE+ H R +P + K PPL P
Sbjct: 463 IRVTREKCHDCNRNAPSQAKTPPLPTAP 490
>SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57)
Length = 1121
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 24 VQNYLSQDGRSATPYPMYGDSSFNGESGARHGNSTEYTVSESRAEMVRSERERLHTETRR 83
+ N + QDGRS++ + S+ + H S+ ++ E + + ER RL E +
Sbjct: 32 LHNPVGQDGRSSSSWNSKLHSNVGFRNYLDHVVSSIDSLEELQQQQQEEERARLVEEANQ 91
Query: 84 SPPEEKR 90
EE++
Sbjct: 92 RAAEERQ 98
>SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5)
Length = 398
Score = 26.6 bits (56), Expect = 9.8
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 20 PHMNVQNYLSQDGRSATPYPMYGDSSFNGESGARHGNS-TEYTVSESRAE--MVRSERER 76
PH + Y S D S+TP P D+ + + T Y +ES+AE +V R
Sbjct: 26 PHPMITPYSSVDVASSTPPPANFDNDYEEVVVRKKPTKPTPYKPTESKAEEFVVPPLFSR 85
Query: 77 LHTETRRSPPEEKRPPLVPLPAFQQ 101
+E +SP E+ V P F Q
Sbjct: 86 GFSEDVQSPDEDSSYE-VTSPRFPQ 109
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 71 RSERERLHTETRRSPPEEKRPPLVP 95
R ER+R HT SPP PP P
Sbjct: 804 REERKRRHTPHEDSPPPPPPPPPPP 828
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 124 DVPGDNFSYDSFQEWDGPLEPHWSSQPTSREIKCEE 159
D+ GD+F DS + L +W+ Q S + C E
Sbjct: 928 DLEGDSFERDSVKAIAEMLSGNWTLQDLSLRLHCSE 963
>SB_48999| Best HMM Match : 7tm_1 (HMM E-Value=2.3e-08)
Length = 1158
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 70 VRSERERLHTETRRSPPEEKRPPLVPLP 97
+R RE+ H R SP + + PPL P
Sbjct: 553 IRVTREKCHDCDRNSPSQTRTPPLSTAP 580
>SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086)
Length = 627
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 82 RRSPPEEKRPPLVPLPAFQQ 101
R SPP+ PP PLP F Q
Sbjct: 158 RHSPPQTPVPPPPPLPPFAQ 177
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 26.6 bits (56), Expect = 9.8
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 20 PHMNVQNYLSQDGRSATPYPMYGDSSFNGESGARHGNS-TEYTVSESRAE--MVRSERER 76
PH + Y S D S+TP P D+ + + T Y +ES+AE +V R
Sbjct: 1783 PHPMITPYSSVDVASSTPPPANFDNDYEEVVVRKKPTKPTPYKPTESKAEEFVVPPLFSR 1842
Query: 77 LHTETRRSPPEEKRPPLVPLPAFQQ 101
+E +SP E+ V P F Q
Sbjct: 1843 GFSEDVQSPDEDSSYE-VTSPRFPQ 1866
>SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)
Length = 736
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 24 VQNYLSQDGRSATPYPMYGDSSFNGESGARHGNSTEYTVSE---SRAEMVRSERERLHTE 80
V+ Y + G + G + + S A+ G ++ + S A + + +TE
Sbjct: 106 VERYTPRSGSKSKKRKQKGKDAPDNTSKAQTGEPSQAALQRDVASSASAPENNQPSENTE 165
Query: 81 TRRSPPEEKRPP 92
T SPP +PP
Sbjct: 166 TLTSPPPPSKPP 177
>SB_1700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 26.6 bits (56), Expect = 9.8
Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 17 YQGPHMNVQNYLSQDGRSATPYPMYGDSSFNGESGARHGNSTEYTVSESRAEMVRSERER 76
Y+ H N NY+S + P+ + + N+ Y +S M+ +
Sbjct: 39 YRNTHANNNNYVSDESDDLVPFD-------HDDRRNIINNNNNYESDDSDTNMLSDLDDE 91
Query: 77 LHTETRRSPPEEKRPPLVPLPAFQ 100
E R P R P PLP Q
Sbjct: 92 SDEEVNRDAP-TPRTPHPPLPVIQ 114
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.129 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,305,528
Number of Sequences: 59808
Number of extensions: 251561
Number of successful extensions: 577
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 563
Number of HSP's gapped (non-prelim): 29
length of query: 161
length of database: 16,821,457
effective HSP length: 77
effective length of query: 84
effective length of database: 12,216,241
effective search space: 1026164244
effective search space used: 1026164244
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)
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