Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000316-TA|BGIBMGA000316-PA|IPR013069|BTB/POZ,
IPR007087|Zinc finger, C2H2-type, IPR000210|BTB
(464 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 36 5e-04
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 34 0.002
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 33 0.003
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 33 0.006
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 29 0.069
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 27 0.21
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 27 0.37
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 27 0.37
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 27 0.37
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 27 0.37
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 27 0.37
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 27 0.37
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 27 0.37
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 27 0.37
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 27 0.37
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 4.5
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 4.5
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 4.5
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 23 4.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 7.9
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 22 7.9
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 22 7.9
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 36.3 bits (80), Expect = 5e-04
Identities = 37/149 (24%), Positives = 59/149 (39%), Gaps = 7/149 (4%)
Query: 317 HNNSSRSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQDGDTEN-TYNQEQSQALLL 375
H +SS + + +VQ Q+ + Y+ + LLS G T + T + Q +
Sbjct: 161 HPSSSYPANEISCPQVQWSATPQAGSTPT-YQTQGLLSPSYGGTTYSFTADFRPPQETPV 219
Query: 376 LAGMSTVP-GLGGGASTSQIMSHQQSNHAAICGDCPHCGMKYSNQSALKYHVRLMHSDLT 434
LA +VP I ++ N C CG Y+ S LK H+R +
Sbjct: 220 LASYKSVPMSFSSPRRRHSINLLEEDNQKP--NVCRICGKSYARPSTLKTHLRTHSGEKP 277
Query: 435 NRLCCYLCPRSFTMRETFKEHMWTSHGQR 463
R C C +SF+ H+ T G++
Sbjct: 278 YR--CIDCNKSFSQAANLTAHVRTHSGEK 304
Score = 34.3 bits (75), Expect = 0.002
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 409 CPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPRSFTMRETFKEHMWTSHGQR 463
CP C ++S S++ H+R + R C LC ++F+ T +H+ G++
Sbjct: 308 CPVCDRRFSQSSSVTTHMRTHSGERPYR--CRLCKKAFSDSSTLTKHLRIHSGEK 360
Score = 33.1 bits (72), Expect = 0.004
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 389 ASTSQIMSHQQSNHAAICGDCPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPRSFTM 448
A S + +H +++ C C +S + L HVR + R C +C R F+
Sbjct: 260 ARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFR--CPVCDRRFSQ 317
Query: 449 RETFKEHMWTSHGQR 463
+ HM T G+R
Sbjct: 318 SSSVTTHMRTHSGER 332
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 34.3 bits (75), Expect = 0.002
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 409 CPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPRSFTMRETFKEHMWTSHGQR 463
CP C ++S S++ H+R + R C LC ++F+ T +H+ G++
Sbjct: 52 CPVCDRRFSQSSSVTTHMRTHSGERPYR--CRLCKKAFSDSSTLTKHLRIHSGEK 104
Score = 33.1 bits (72), Expect = 0.004
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 389 ASTSQIMSHQQSNHAAICGDCPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPRSFTM 448
A S + +H +++ C C +S + L HVR + R C +C R F+
Sbjct: 4 ARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFR--CPVCDRRFSQ 61
Query: 449 RETFKEHMWTSHGQR 463
+ HM T G+R
Sbjct: 62 SSSVTTHMRTHSGER 76
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 33.5 bits (73), Expect = 0.003
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 410 PHCGMKYSNQSALKYHVRLMHSDLTNRLCCYL-CPRSFTMRETFKEHMWTSHGQR 463
P CG Y S LK H+R H+ +C +L C + FT + + H+ T G++
Sbjct: 320 PGCGKVYGKTSHLKAHLR-WHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEK 373
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 32.7 bits (71), Expect = 0.006
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 394 IMSHQQSNHAAICGDCPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPRSFTMRETFK 453
+ +H++++ +C C +++ LK H+RL + R C C R F +
Sbjct: 150 LQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYR--CEHCDRQFVQVANLR 207
Query: 454 EHMWTSHGQR 463
H+ G+R
Sbjct: 208 RHLRVHTGER 217
Score = 31.9 bits (69), Expect = 0.010
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 409 CPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPRSFTMRETFKEH 455
C HC MK+S+ + LK HV L+H++ C C F R H
Sbjct: 221 CEHCSMKFSDSNQLKAHV-LIHTN-EKPFECDKCRGRFRRRHHLVHH 265
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 29.1 bits (62), Expect = 0.069
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 409 CPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPRSFTMRETFKEHM 456
C C S +SAL+ H R + + C +C R+FT + K HM
Sbjct: 137 CVICHRVLSCKSALQMHYRTHTGERPFK--CKICGRAFTTKGNLKTHM 182
Score = 27.5 bits (58), Expect = 0.21
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 397 HQQSNHAAICGDCPHCGMKYSNQSALKYHVRLMHSDLTN 435
H+ + CP C K++N L+ H+RL + T+
Sbjct: 185 HRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTD 223
Score = 23.4 bits (48), Expect = 3.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 307 SKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPKSD 344
SK SN +T+ +RSP + S+ +Q +PE S KS+
Sbjct: 5 SKYSNEDTLG----ARSPGGDHSENMQDEPENLSNKSN 38
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.21
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 263 SLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
S P N+ + L S ++ S S + N+ S S S+TE NN++
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNN- 188
Query: 323 SPIKNTSDEVQVKP 336
S +S+ Q+ P
Sbjct: 189 SKSSQSSNPPQIYP 202
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 26.6 bits (56), Expect = 0.37
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 138 ISSRPHHNASHKDAKLPGLKKRRSSTSDKPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSS 197
+S P H +SH PG K+ + KP ++++ T P+LN
Sbjct: 236 LSPHPPHLSSHPAIVTPGPKQELPDLNHKPLNLTIKKMPIAIVAPFTIVEPKLNKHEDLP 295
Query: 198 KIDNVLPVENNVDKKCD-GKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAI 256
+ D + + N D+ D K + + + + Q+ K E D+ S
Sbjct: 296 Q-DLSMKLSKNNDQCLDLSKTKETNLEKSNLNHNEQLR--KYLCKNE--DETKNHYSKNT 350
Query: 257 LSEQDDSLPDYENSMLARSLLSGIN 281
+EQ + L D S+ S+ S IN
Sbjct: 351 YNEQGNKLADLYKSLGPDSVYSFIN 375
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 26.6 bits (56), Expect = 0.37
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 138 ISSRPHHNASHKDAKLPGLKKRRSSTSDKPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSS 197
+S P H +SH PG K+ + KP ++++ T P+LN
Sbjct: 128 LSPHPPHLSSHPAIVTPGPKQELPDLNHKPLNLTIKKMPIAIVAPFTIVEPKLNKHEDLP 187
Query: 198 KIDNVLPVENNVDKKCD-GKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAI 256
+ D + + N D+ D K + + + + Q+ K E D+ S
Sbjct: 188 Q-DLSMKLSKNNDQCLDLSKTKETNLEKSNLNHNEQLR--KYLCKNE--DETKNHYSKNT 242
Query: 257 LSEQDDSLPDYENSMLARSLLSGIN 281
+EQ + L D S+ S+ S IN
Sbjct: 243 YNEQGNKLADLYKSLGPDSVYSFIN 267
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.37
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 263 SLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
S P N+ + L S ++ S S + N+ S S S+TE NN++
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN- 188
Query: 323 SPIKNTSDEVQVKP 336
S +S+ Q+ P
Sbjct: 189 SKSGQSSNPPQIYP 202
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 26.6 bits (56), Expect = 0.37
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 263 SLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
S P N+ + L S ++ S S + N+ S S S+TE NN++
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN- 188
Query: 323 SPIKNTSDEVQVKP 336
S +S+ Q+ P
Sbjct: 189 SKSGQSSNPPQIYP 202
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.37
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 263 SLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
S P N+ + L S ++ S S + N+ S S S+TE NN++
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN- 188
Query: 323 SPIKNTSDEVQVKP 336
S +S+ Q+ P
Sbjct: 189 SKSGQSSNPPQIYP 202
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 26.6 bits (56), Expect = 0.37
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 263 SLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
S P N+ + L S ++ S S + N+ S S S+TE NN++
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN- 188
Query: 323 SPIKNTSDEVQVKP 336
S +S+ Q+ P
Sbjct: 189 SKSGQSSNPPQIYP 202
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 26.6 bits (56), Expect = 0.37
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 263 SLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
S P N+ + L S ++ S S + N+ S S S+TE NN++
Sbjct: 86 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN- 144
Query: 323 SPIKNTSDEVQVKP 336
S +S+ Q+ P
Sbjct: 145 SKSGQSSNPPQIYP 158
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.37
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 263 SLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
S P N+ + L S ++ S S + N+ S S S+TE NN++
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN- 188
Query: 323 SPIKNTSDEVQVKP 336
S +S+ Q+ P
Sbjct: 189 SKSGQSSNPPQIYP 202
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.37
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 263 SLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
S P N+ + L S ++ S S + N+ S S S+TE NN++
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN- 188
Query: 323 SPIKNTSDEVQVKP 336
S +S+ Q+ P
Sbjct: 189 SKSGQSSNPPQIYP 202
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 23.0 bits (47), Expect = 4.5
Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 15/163 (9%)
Query: 166 KPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLITAN 225
K +D + D K K C++P +I ++ N N++P T N
Sbjct: 86 KLSDKFLDDEMSK-KSCQGCEMPSAGLCGSHDEIPDISSTRGN-------NNNTPSATNN 137
Query: 226 GKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSL-PDYENSMLARSLLSGINPSK 284
+ ++ + S + D E S S +D SL P + A S+ + +
Sbjct: 138 NTNFNNNSNGASSVGSSSPFDKLIEEDSR---SNEDTSLHPSPRITKKANSVSVKVENRR 194
Query: 285 SDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKN 327
+ S S +K + + +I P S+D+ +S ++S P N
Sbjct: 195 N---SPNSCEKKIGLSKISPKESQDAANVKLSPKSASSLPPGN 234
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 23.0 bits (47), Expect = 4.5
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 331 EVQVKPERQSPKSDVEYEPEVLLSEHQDGDTENT 364
E + + E+ P S P+V+ E + D+E T
Sbjct: 270 EKKAQKEKDKPNSTTNGSPDVIKVEPELSDSEKT 303
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 23.0 bits (47), Expect = 4.5
Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 15/163 (9%)
Query: 166 KPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLITAN 225
K +D + D K K C++P +I ++ N N++P T N
Sbjct: 34 KLSDKFLDDEMSK-KSCQGCEMPSAGLCGSHDEIPDISSTRGN-------NNNTPSATNN 85
Query: 226 GKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSL-PDYENSMLARSLLSGINPSK 284
+ ++ + S + D E S S +D SL P + A S+ + +
Sbjct: 86 NTNFNNNSNGASSVGSSSPFDKLIEEDSR---SNEDTSLHPSPRITKKANSVSVKVENRR 142
Query: 285 SDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKN 327
+ S S +K + + +I P S+D+ +S ++S P N
Sbjct: 143 N---SPNSCEKKIGLSKISPKESQDAANVKLSPKSASSLPPGN 182
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 23.0 bits (47), Expect = 4.5
Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 15/163 (9%)
Query: 166 KPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLITAN 225
K +D + D K K C++P +I ++ N N++P T N
Sbjct: 217 KLSDKFLDDEMSK-KSCQGCEMPSAGLCGSHDEIPDISSTRGN-------NNNTPSATNN 268
Query: 226 GKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSL-PDYENSMLARSLLSGINPSK 284
+ ++ + S + D E S S +D SL P + A S+ + +
Sbjct: 269 NTNFNNNSNGASSVGSSSPFDKLIEEDSR---SNEDTSLHPSPRITKKANSVSVKVENRR 325
Query: 285 SDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKN 327
+ S S +K + + +I P S+D+ +S ++S P N
Sbjct: 326 N---SPNSCEKKIGLSKISPKESQDAANVKLSPKSASSLPPGN 365
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 7.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 329 SDEVQVKPERQSPKSDVEYEPE 350
+D+ + KP P + + YEP+
Sbjct: 2205 NDKTKPKPTTMKPTTTIGYEPQ 2226
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 22.2 bits (45), Expect = 7.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 336 PERQSPKSDVEYEPEVLLSEHQDGDTENT 364
PE P+ YEP S + D+EN+
Sbjct: 26 PEPYPPRCPPIYEPSCQYSPVSNSDSENS 54
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 22.2 bits (45), Expect = 7.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 152 KLPGLKKRRSSTSDKPNDVSVGDSYKKTKVLD 183
K P S++S+K + + GD KT LD
Sbjct: 249 KSPSHSVDNSNSSEKKSSIQHGDDAHKTHHLD 280
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.311 0.126 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,468
Number of Sequences: 317
Number of extensions: 4501
Number of successful extensions: 44
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 32
length of query: 464
length of database: 114,650
effective HSP length: 59
effective length of query: 405
effective length of database: 95,947
effective search space: 38858535
effective search space used: 38858535
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)
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