Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000316-TA|BGIBMGA000316-PA|IPR013069|BTB/POZ,
IPR007087|Zinc finger, C2H2-type, IPR000210|BTB
(464 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 43 5e-04
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 42 7e-04
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 42 7e-04
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 41 0.002
At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Conta... 40 0.003
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 40 0.003
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 40 0.005
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 39 0.006
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 39 0.008
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 37 0.025
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 37 0.025
At2g35050.1 68415.m04300 protein kinase family protein contains ... 37 0.025
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 37 0.025
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 37 0.025
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 36 0.043
At5g05190.1 68418.m00553 expressed protein similar to unknown pr... 36 0.057
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 35 0.099
At3g56230.1 68416.m06249 speckle-type POZ protein-related contai... 35 0.13
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 35 0.13
At2g16485.1 68415.m01889 expressed protein ; expression supporte... 35 0.13
At5g62550.1 68418.m07850 expressed protein 34 0.17
At5g20600.1 68418.m02446 expressed protein 34 0.17
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 34 0.23
At1g04210.1 68414.m00411 leucine-rich repeat family protein / pr... 34 0.23
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 33 0.30
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 33 0.30
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 33 0.53
At2g34830.1 68415.m04276 WRKY family transcription factor 32 0.70
At5g07940.1 68418.m00920 expressed protein 32 0.93
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 32 0.93
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 32 0.93
At1g60790.1 68414.m06843 expressed protein 32 0.93
At1g02305.1 68414.m00175 cathepsin B-like cysteine protease, put... 32 0.93
At2g37570.1 68415.m04609 expressed protein 31 1.2
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 31 1.2
At5g16630.1 68418.m01947 DNA repair protein Rad4 family low simi... 31 1.6
At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein ... 31 1.6
At4g26120.1 68417.m03760 ankyrin repeat family protein / BTB/POZ... 31 1.6
At4g07520.1 68417.m01174 hypothetical protein contains Pfam prof... 31 1.6
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro... 31 1.6
At3g48360.1 68416.m05278 speckle-type POZ protein-related conta... 31 2.1
At2g22795.1 68415.m02704 expressed protein 31 2.1
At1g58025.1 68414.m06576 DNA-binding bromodomain-containing prot... 31 2.1
At5g61940.1 68418.m07775 ubiquitin carboxyl-terminal hydrolase-r... 30 2.8
At3g12020.1 68416.m01490 kinesin motor protein-related similar t... 30 2.8
At3g03680.1 68416.m00371 C2 domain-containing protein contains I... 30 2.8
At2g39260.1 68415.m04821 MIF4G domain-containing protein similar... 30 2.8
At2g36350.1 68415.m04461 protein kinase, putative similar to pro... 30 2.8
At2g19240.1 68415.m02246 RabGAP/TBC domain-containing protein lo... 30 2.8
At1g19140.2 68414.m02381 expressed protein 30 2.8
At1g19140.1 68414.m02380 expressed protein 30 2.8
At5g18550.1 68418.m02193 zinc finger (CCCH-type) family protein ... 30 3.7
At5g06780.1 68418.m00766 emsy N terminus domain-containing prote... 30 3.7
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 30 3.7
At4g24480.1 68417.m03509 serine/threonine protein kinase, putati... 30 3.7
At3g14010.1 68416.m01769 hydroxyproline-rich glycoprotein family... 30 3.7
At1g75410.1 68414.m08760 BEL1-like homeodomain 3 protein (BLH3) ... 30 3.7
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 30 3.7
At1g14380.2 68414.m01705 calmodulin-binding family protein conta... 30 3.7
At1g09000.1 68414.m01004 NPK1-related protein kinase, putative (... 30 3.7
At1g02300.1 68414.m00173 cathepsin B-like cysteine protease, put... 30 3.7
At4g35560.1 68417.m05053 expressed protein 29 4.9
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 29 4.9
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 29 4.9
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 29 4.9
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 29 4.9
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 29 4.9
At3g52100.1 68416.m05717 PHD finger family protein contains Pfam... 29 4.9
At3g49590.2 68416.m05420 expressed protein 29 4.9
At3g49590.1 68416.m05419 expressed protein 29 4.9
At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containi... 29 4.9
At3g12860.1 68416.m01603 nucleolar protein Nop56, putative simil... 29 4.9
At2g38080.1 68415.m04674 laccase, putative / diphenol oxidase, p... 29 4.9
At1g70100.3 68414.m08067 expressed protein 29 4.9
At1g70100.2 68414.m08066 expressed protein 29 4.9
At1g70100.1 68414.m08065 expressed protein 29 4.9
At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger) fa... 29 4.9
At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger) fa... 29 4.9
At5g47660.1 68418.m05884 DNA-binding protein-related similar to ... 29 6.5
At5g24630.1 68418.m02909 expressed protein ; expression support... 29 6.5
At4g39860.2 68417.m05648 expressed protein 29 6.5
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 29 6.5
At3g13020.1 68416.m01622 hAT dimerisation domain-containing prot... 29 6.5
At2g28290.2 68415.m03434 chromatin remodeling protein, putative ... 29 6.5
At2g28290.1 68415.m03433 chromatin remodeling protein, putative ... 29 6.5
At2g25640.1 68415.m03073 transcription elongation factor-related... 29 6.5
At2g03630.1 68415.m00323 hypothetical protein 29 6.5
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 29 6.5
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 29 6.5
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 29 8.6
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 29 8.6
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 29 8.6
At4g20160.1 68417.m02949 expressed protein ; expression supporte... 29 8.6
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 29 8.6
At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7... 29 8.6
At1g64570.1 68414.m07319 expressed protein 29 8.6
At1g13680.1 68414.m01608 expressed protein 29 8.6
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 42.7 bits (96), Expect = 5e-04
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 10 NNFQSNIVSALDSLKCSEDLVDVTLTCEGRNIKAHKVILSACSPYFRNVFKENPCQHPV- 68
N Q V++L + D+T+ +I AH+ +L+A SP FR++F + + +
Sbjct: 144 NQSQVTAVTSLGRMLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLHDLKEKELS 203
Query: 69 -IILKDVSADDIVSLLSYMYQGEVFIEESKLSSFLHTAALLQVKGLTGVTQQKE 121
I + D+ D + LSY+Y G + E+ +H ALLQ + KE
Sbjct: 204 EINVLDMPLDACQAFLSYIY-GNIQNED----FLIHRLALLQAAEKYDIADLKE 252
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 42.3 bits (95), Expect = 7e-04
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 37 EGRNIKAHKVILSACSPYFRNVFKENPCQ---HPVIILKDVSADDIVSLLSYMYQGEVFI 93
E I HK +L+A S FRN+ + C+ I L D+S D++ SLL ++Y G +
Sbjct: 33 EAPPIPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKA 92
Query: 94 EESKLSSFLHTAALLQVKGLTGVTQQKENFTSPNTSNKLYTQLTISSRP 142
++ S A + L V + +F + +S + L ++S P
Sbjct: 93 PYNQYRSLYLAADKYDISYLQDVC--RNHFIASLSSRNVLDILELASIP 139
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 42.3 bits (95), Expect = 7e-04
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 37 EGRNIKAHKVILSACSPYFRNVFKENPCQ---HPVIILKDVSADDIVSLLSYMYQGEVFI 93
E I HK +L+A S FRN+ + C+ I L D+S D++ SLL ++Y G +
Sbjct: 33 EAPPIPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKA 92
Query: 94 EESKLSSFLHTAALLQVKGLTGVTQQKENFTSPNTSNKLYTQLTISSRP 142
++ S A + L V + +F + +S + L ++S P
Sbjct: 93 PYNQYRSLYLAADKYDISYLQDVC--RNHFIASLSSRNVLDILELASIP 139
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 40.7 bits (91), Expect = 0.002
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 14 SNIVSALDSLKCSEDLVDVTLTCEGRNIKAHKVILSACSPYFRNVFKENPCQHP-VIILK 72
S+I S L +ED D+T G +AH+++L+A SP F + F + + I +
Sbjct: 200 SDIGSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEFLDVTGEEDRDIEVT 259
Query: 73 DVSADDIVSLLSYMYQGEVFIEESKLSS 100
D+ +LL Y+Y+ + IE+++ SS
Sbjct: 260 DMEPKVFKALLHYIYK-DALIEDAESSS 286
>At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Contains
similarity to gb|AJ000644 SPOP (speckle-type POZ
protein) from Homo sapiens and contains a PF|00651
BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221,
gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come
from this gene;supported by full-length
Length = 326
Score = 40.3 bits (90), Expect = 0.003
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 29 LVDVTLTCEGRNIKAHKVILSACSPYFRNVFKEN--PCQHPVIILKDVSADDIVSLLSYM 86
L DV + + AHK ILSA S F+++F + + I + D+S + ++LLSY+
Sbjct: 160 LTDVIIHTADGTLSAHKAILSASSTVFKSMFHHDLMEKESSTIHIDDMSRESCMALLSYL 219
Query: 87 YQGEVFIEESKLSSFLHTAALLQVKGLTGVTQQK 120
Y G + EE + H ALL +T K
Sbjct: 220 Y-GNITQEE----FWKHRLALLGAANKYDITDLK 248
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 20 LDSLKCSEDLVDVTLTCEGRNIKAHKVILSACSPYFRN-VFKENPCQHPVIILKDVSADD 78
LDS++ S D+T G AHK++L+A SP+F++ F E + + + D+
Sbjct: 192 LDSMEGS----DITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKV 247
Query: 79 IVSLLSYMYQ 88
+LL +MY+
Sbjct: 248 FKALLQFMYK 257
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 39.5 bits (88), Expect = 0.005
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 31 DVTLTCEGRNIKAHKVILSACSPYFRNVFK-ENPCQHPVIILKD-VSADDIVSLLSYMYQ 88
DV +GR I+AH+VILSA SP+F+ F+ E + V K+ +S + SL+ + Y
Sbjct: 174 DVMFYVQGRPIEAHRVILSARSPFFKQKFENEWKDRREVRFSKEKLSYPALCSLIHFFYS 233
Query: 89 GEVFIEESKLSSFLHTAALLQVKGLTGVTQQK 120
+ I + + + + + L + +++
Sbjct: 234 DRLEISVDDMEDLVRICKVCKCESLQKIIEKE 265
Score = 32.3 bits (70), Expect = 0.70
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 27 EDLVDVTLTCEGRNIKAHKVILSACSPYFR------NVFKEN----PCQH-PVIILKDVS 75
E L DV + + RN H+VIL++ S YFR N F E P P + D+S
Sbjct: 335 ESLADVCVRVDKRNFYCHQVILASRSEYFRARLSRVNDFHEGKNGLPGDTLPFLEEHDLS 394
Query: 76 ADDIVSLLSYMY 87
A+ ++ YMY
Sbjct: 395 AEAFEKMIEYMY 406
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 39.1 bits (87), Expect = 0.006
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 14 SNIVSALDSLKCSEDLVDVTLTCEGRNIKAHKVILSACSPYFRNVFKENPCQ-HPVIILK 72
S+ LD+L+ S DVT G +AHK++L+A S +FR++F + + +++
Sbjct: 193 SHFGKLLDTLQGS----DVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNSDVVIS 248
Query: 73 DVSADDIVSLLSYMYQ 88
D+ +LL +MY+
Sbjct: 249 DLEPKVFKALLHFMYK 264
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 38.7 bits (86), Expect = 0.008
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 41 IKAHKVILSACSPYFRNVFKENPCQHPV---IILKDVSADDIVSLLSYMYQGEVFIEESK 97
I AHK +L + SP F+ + EN + + I + DVS D + + + Y+Y E ++E
Sbjct: 80 IPAHKSVLVSRSPVFKAML-ENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQM 138
Query: 98 LSSFLHTAALLQVKGLTGVTQQKENFTSPNTSNKLYTQLTISSRPHHNASH 148
L + QVK L ++ T + N L +T + HNA H
Sbjct: 139 ACDLLVMSEKYQVKHLKSYC-ERFLVTKLSPDNSL---MTYAFAHQHNAKH 185
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain,
PF00023: Ankyrin repeat and Pfam domain, PF00651:
BTB/POZ domain
Length = 467
Score = 37.1 bits (82), Expect = 0.025
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 10 NNFQSNIVS-ALDSLKC---SEDLVDVTLTCEGRNIKAHKVILSACSPYFRNVFKENPCQ 65
N F+ ++ S +LD L + DVT + EGR + AH+ IL+A S +FR F E+
Sbjct: 3 NTFEESLKSMSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCESDPS 62
Query: 66 HP 67
P
Sbjct: 63 QP 64
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 37.1 bits (82), Expect = 0.025
Identities = 52/221 (23%), Positives = 83/221 (37%), Gaps = 16/221 (7%)
Query: 161 SSTSDKPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSP 220
SS D +D K+T VL+ ++ SS + P + + K DS
Sbjct: 182 SSDDDSSSDEETVPMKKQTAVLEKAKAESSSSDDGSSSDEEPTPAKK---EPIVVKKDS- 237
Query: 221 LITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGI 280
+ +S+S + T V+ D E S+ SE++ S D +++
Sbjct: 238 ----SDESSSDEETPVVKKKPTTVVKDAKAESSS---SEEESSSDDEPTPAKKPTVVKNA 290
Query: 281 NPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQS 340
P+ DS+S+ + P K + S SS + SD+ + K E+ +
Sbjct: 291 KPAAKDSSSSEEDSDEEESDDEKPPTKKAKVSSKTSKQESSSDESSDESDKEESKDEKVT 350
Query: 341 PK---SDVEYEPEVLLSEHQDGDTENTYNQEQSQALLLLAG 378
PK SDVE S + T NQ Q + L AG
Sbjct: 351 PKKKDSDVEMVDAEQKSNAKQPKTPT--NQTQGGSKTLFAG 389
>At2g35050.1 68415.m04300 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 1257
Score = 37.1 bits (82), Expect = 0.025
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 14/168 (8%)
Query: 237 SIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGKKP 296
S+P V DD E I+++ S PD +S L+ L S+ +NLS K+P
Sbjct: 513 SMPSDLIVPDDLPKE-EAPIVTQTSSSTPDPSSSTLSEKSL---RKSEDHVENNLSAKEP 568
Query: 297 VNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDE----VQVKPERQSPKSDVEYEPEVL 352
E +R + + +VS + S P + +E +++ PKS V E +
Sbjct: 569 KMRKEHSTTRVNEYSVSSVS--SDSMVPDQALKEEAPISMKISNSTPDPKSLVYPEKSLR 626
Query: 353 LSEHQDG--DTENT-YNQEQSQALLLLAGMSTVPGLGGGASTSQIMSH 397
S+ + G DT N + Q LL G S V G G ++S +S+
Sbjct: 627 TSQEKTGAFDTTNEGMKKNQDNQFCLLGGFS-VSGHGTSNNSSSNVSN 673
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 37.1 bits (82), Expect = 0.025
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 30 VDVTLTCEGRNIKAHKVILSACSPYFRNVFKENPCQH--PVIILKDVSADDIVSLLSYMY 87
+ + L+ ++HKVILS S F +F + I L DVS + +++++MY
Sbjct: 353 IKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMY 412
Query: 88 QGEVFIEES 96
GE+ +E++
Sbjct: 413 SGELNMEDT 421
Score = 32.3 bits (70), Expect = 0.70
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 37 EGRNIKAHKVILSACSPYFRNVFKENPCQHPVIILKDVSADDIVSLLSYMYQGEVFIEES 96
E ++ AHKVIL A F VI L+ VS + +LL Y+Y G I ES
Sbjct: 220 EEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQILES 274
Query: 97 KLSSFLHTAALLQVKGL 113
+L+ ++ +V L
Sbjct: 275 ELAPLRDLSSKFEVMSL 291
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 37.1 bits (82), Expect = 0.025
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 30 VDVTLTCEGRNIKAHKVILSACSPYFRNVFKENPCQH--PVIILKDVSADDIVSLLSYMY 87
+ + L+ ++HKVILS S F +F + I L DVS + +++++MY
Sbjct: 353 IKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMY 412
Query: 88 QGEVFIEES 96
GE+ +E++
Sbjct: 413 SGELNMEDT 421
Score = 32.3 bits (70), Expect = 0.70
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 37 EGRNIKAHKVILSACSPYFRNVFKENPCQHPVIILKDVSADDIVSLLSYMYQGEVFIEES 96
E ++ AHKVIL A F VI L+ VS + +LL Y+Y G I ES
Sbjct: 220 EEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQILES 274
Query: 97 KLSSFLHTAALLQVKGL 113
+L+ ++ +V L
Sbjct: 275 ELAPLRDLSSKFEVMSL 291
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 36.3 bits (80), Expect = 0.043
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 14 SNIVSALDSLKCSEDLVDVTLTCEGRNIKAHKVILSACSPYFRNVFKENPCQHPV--IIL 71
SN+ L L SE D+ KAHK+IL+A SP FR F + V I++
Sbjct: 178 SNMGQGLKDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVI 237
Query: 72 KDVSADDIVSLLSYMY 87
D+ ++LS++Y
Sbjct: 238 DDIEPSIFKAMLSFIY 253
>At5g05190.1 68418.m00553 expressed protein similar to unknown
protein (emb|CAB88044.1)
Length = 615
Score = 35.9 bits (79), Expect = 0.057
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 157 KKRRSSTSDKPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVE--NNVDKKCD 214
K+R + S P S G++ ++ + + +P NN S SS D VLP +VD++ +
Sbjct: 42 KRRNIAPSSTP---SAGET-ERAQANEPQSVPETNNVSSSSGQDTVLPSSPGRSVDQEYE 97
Query: 215 -GKNDS---------PLITANGKSTSS-QVHDCSIPMKTEVLDDNSTELSTAILSEQDDS 263
G+N S L +NG T+ Q +CS+ + N E ++ + S ++
Sbjct: 98 KGRNASMESTEKELDDLELSNGDGTNEIQEQECSLGDS----EKNEREDNSRLESHMMNT 153
Query: 264 LPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRS 323
+ + S + LS ++ + ASN SG ++ + P K S + +++ S
Sbjct: 154 VAEAAGSGSSSGSLS-VDHVVAARASNPSGNSEIS-PDASPVEEKQSQLDILANKTPSAY 211
Query: 324 PI-----KNTSDEVQVKPER---QSPKSDVEYEPEVLLSEHQDGDTENTYNQEQSQAL 373
+ N+S ++ P+ + +S ++Y P S DG +E++ ++ + Q L
Sbjct: 212 DVVAARASNSSGNAEISPDASPVEEKQSQLDY-PANKTSSAYDG-SESSSDEREGQLL 267
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 35.1 bits (77), Expect = 0.099
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 31 DVTLTCEGRNIKAHKVILSACSPYFR-NVFKENPCQHP-VIILKDVSADDIVSLLSYMYQ 88
DVT +G AHK++L+A S FR +F ++ II++DV A LL ++Y
Sbjct: 203 DVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAPIFKMLLHFIYW 262
Query: 89 GEVFIEESKLSSFLHTAALLQVKGL 113
E+ + + + L A+ L + L
Sbjct: 263 DEMPDMQDLIGTDLKWASTLVAQHL 287
>At3g56230.1 68416.m06249 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 282
Score = 34.7 bits (76), Expect = 0.13
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 37 EGRNIKAHKVILSACSPYFRNVFKENPCQ---HPVIILKDVSADDIVSLLSYMYQG 89
+G I AH+ +L++ S F+N+ + C+ I L++++++ + +LL ++Y G
Sbjct: 120 DGPPIPAHRALLASKSEIFKNILDSDGCKTAPEYAITLQELNSEQLQALLEFLYTG 175
>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain,
PF00023: Ankyrin repeat and Pfam domain, PF00651:
BTB/POZ domain
Length = 491
Score = 34.7 bits (76), Expect = 0.13
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 31 DVTLTCEGRNIKAHKVILSACSPYFRNVFKENPCQHPV 68
DVT + EGR + AH+ IL+A S +FR F PV
Sbjct: 27 DVTFSVEGRLVHAHRCILAARSLFFRKFFCGTDSPQPV 64
>At2g16485.1 68415.m01889 expressed protein ; expression supported
by MPSS
Length = 617
Score = 34.7 bits (76), Expect = 0.13
Identities = 25/137 (18%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Query: 228 STSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDS 287
S S+V + I + + DDN T+L+ + + +D S+ D E + K
Sbjct: 435 SEMSEVTETMIKDEDQEKDDNMTDLAEDVENHRDSSVADIEEGREDHEDMGVTETQKETV 494
Query: 288 ASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDE--VQVKPERQSPKSDV 345
+ K + E +R +D + E +K D ++ R+S +
Sbjct: 495 LGKVDRTKIAEVSEETDTRIEDEDQEKDDEMTDVAEDVKTHGDSSVADIEEGRESQEEMT 554
Query: 346 EYEPEVLLSEHQDGDTE 362
E + + ++++ + + E
Sbjct: 555 ETQEDSVMADEEPEEVE 571
>At5g62550.1 68418.m07850 expressed protein
Length = 487
Score = 34.3 bits (75), Expect = 0.17
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 252 LSTAILSEQDDS-LPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDS 310
L +A+ S++ +PD+ S + R S+S + +LSGKK V+ ++ P R
Sbjct: 26 LRSALRSKEGKPPVPDFSASSMPRRARVVSAVSQSTTVLDLSGKKSVDRTKLPPRRLSIP 85
Query: 311 NTETVSHNNSSRSPIKNTSDEVQVKPERQSPKS 343
N T + + S S + EV+ K R P+S
Sbjct: 86 NKPTSNSSVKSVSSSVTSLSEVKPKRSRIVPRS 118
>At5g20600.1 68418.m02446 expressed protein
Length = 532
Score = 34.3 bits (75), Expect = 0.17
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 8/138 (5%)
Query: 219 SPLITANGKSTSSQ-VHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARS-- 275
S I ANG S+ + + CS K V + S L +D+S + S L +
Sbjct: 333 SKKIVANGSSSKKKGLKKCSKTKKDSVKKGAVMD-SVVDLGNKDESFDETMISDLRQEFE 391
Query: 276 -LLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTE---TVSHNNSSRSPIKNTSDE 331
+ S ++PSKS+ AS +PV++ + R +++ E + + +++ + + S E
Sbjct: 392 KIASEMSPSKSEVASVCDVAEPVSVSKKTKKRKRENKGEEQVSTVNRDAAETSLAGPSSE 451
Query: 332 VQVKPERQSPKSDVEYEP 349
K R + K+++ ++P
Sbjct: 452 KSSKRVRFAMKNNLVWKP 469
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 33.9 bits (74), Expect = 0.23
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Query: 29 LVDVTLTCEGRNIKAHKVILSACSPYFRNVFKENPCQHPV--IILKDVSADDIVSLLSYM 86
L DVT EGR AH++ L A S FR +F + I + ++ + ++ ++
Sbjct: 540 LSDVTFLVEGRTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEVFELMMRFI 599
Query: 87 YQGEVFIEESKLSSFLHTAALLQVKGL 113
Y G V I L A ++GL
Sbjct: 600 YTGSVDITNEISKDLLRAADQYLLEGL 626
>At1g04210.1 68414.m00411 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1112
Score = 33.9 bits (74), Expect = 0.23
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 208 NVDKKCDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDY 267
+VD C +ND + +S+ + S+ K +V+ DNS + T + SE+D +Y
Sbjct: 392 SVDNSCSDENDK--LFEEASVITSEEEESSL--KADVVSDNSQCVETQLTSERD----NY 443
Query: 268 EN-SMLARSLLSGINPSKSDSASNLSGKKPVN 298
E+ + S SG P D S+ KKP N
Sbjct: 444 ESCEIKTSSPSSGDAPGTVDYNSSSERKKPNN 475
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 33.5 bits (73), Expect = 0.30
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 31 DVTLTCEGRNIKAHKVILSACSPYFR-NVFKENPCQHPVIILKDVSADDIVSLLSYMYQG 89
DVT +G AHK++L+A S FR +F P + +V A+ SLLS + +
Sbjct: 203 DVTFEVDGETFPAHKLVLAARSAVFRAQLF--GPLRSENTNSLEVEAESCPSLLSELLEY 260
Query: 90 EVFIEESKLSSFLHTAAL 107
+ E L+S H L
Sbjct: 261 VARLSEHSLTSSGHRKEL 278
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 33.5 bits (73), Expect = 0.30
Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 1/155 (0%)
Query: 248 NSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRS 307
NS ST LSE ++S +YE + ++ G ++ +N + K N E +
Sbjct: 112 NSKTFSTPSLSETEESFNNYEENYPKKTENYGTKGYNNEEFNNNNNKYDANFKEEFNNNK 171
Query: 308 KDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQDGDTENTYNQ 367
D N NN++ + N + VK E P+++ + + V S + E
Sbjct: 172 YDENYAKEEFNNNNNNNNYNYKYDENVK-EESFPENNEDNKKNVYNSNAYGTELERETPY 230
Query: 368 EQSQALLLLAGMSTVPGLGGGASTSQIMSHQQSNH 402
+ L GMS + G+ + + + H
Sbjct: 231 KGYSHNLERQGMSDTRFMEKGSYYYDLYNDRNHGH 265
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 31 DVTLTCEGRNIKAHKVILSACSPYFRNVF----KENPCQHPVIILKDVSADDIVSLLSYM 86
DVT +G+ AHK+ L A S FR +F KE Q+ + + ++ + ++ ++
Sbjct: 541 DVTFLIDGKQFYAHKIGLVASSDIFRAMFDGLYKERNAQN--VEIPNIRWEVFELMMKFI 598
Query: 87 YQGEVFIEESKLSSFLHTAALLQVKGL 113
Y G + I + L A ++GL
Sbjct: 599 YSGRINIAKHLAKDLLVAADQYLLEGL 625
>At2g34830.1 68415.m04276 WRKY family transcription factor
Length = 427
Score = 32.3 bits (70), Expect = 0.70
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 5/98 (5%)
Query: 274 RSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQ 333
R+ L+G S S S+ N S K PS N + N+S P +T
Sbjct: 278 RNALAGSTRSSSSSSLNPSSKSSTAAATTSPSSRVFQNNSSKDEPNNSNLPSSSTHPPFD 337
Query: 334 VKPERQSPKSDVEYEPEVLLSEHQDGDTENTYNQEQSQ 371
++ +VE E + E D ENTY E Q
Sbjct: 338 AAAIKE---ENVEERQEKM--EFDYNDVENTYRPELLQ 370
>At5g07940.1 68418.m00920 expressed protein
Length = 1526
Score = 31.9 bits (69), Expect = 0.93
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 247 DNSTELSTAILSEQDDSLPDYENSMLARS--LLSGINPSKSDSASNLS 292
D+S+ELST + E+D+S D++ ML+ S L++ +P +S S+ +S
Sbjct: 965 DSSSELSTPQVKERDES-SDFDQRMLSASQPLVASSSPQQSSSSGMMS 1011
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 31.9 bits (69), Expect = 0.93
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 388 GASTSQIMSHQQSNHAAICGDCPHCGMKYSNQSALKYHVRLMH 430
G SQ + S I CP CG K+S+ ++L HV H
Sbjct: 194 GNDISQKLQFSSSKDNGIVEVCPQCGAKFSSVTSLVEHVEKTH 236
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 31.9 bits (69), Expect = 0.93
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 393 QIMSHQQSNHAAICGDCPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYL--CPRSFTMRE 450
++ SNH C CG ++ + LK H++ HS L CY+ C S+ ++
Sbjct: 57 EVDEESSSNHT-----CQECGAEFKKPAHLKQHMQ-SHS-LERSFTCYVDDCAASYRRKD 109
Query: 451 TFKEHMWTSHGQ 462
H+ T G+
Sbjct: 110 HLNRHLLTHKGK 121
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 392 SQIMSHQQSNHA-----AICGDCPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPRSF 446
SQ+ HQ S+ A C + P C ++N+ LK H+R H + C +C S
Sbjct: 230 SQLQKHQDSHVKLDSVEAFCSE-PGCMKYFTNEECLKSHIRSCHQHIN----CEIC-GSK 283
Query: 447 TMRETFKEHMWT 458
+++ K H+ T
Sbjct: 284 HLKKNIKRHLRT 295
>At1g60790.1 68414.m06843 expressed protein
Length = 541
Score = 31.9 bits (69), Expect = 0.93
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 190 LNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNS 249
LNN S +++ V N DK D K S ++ G ++ + +P
Sbjct: 62 LNNSSSVKQVNEKPEVVNLTDKVPDVKVPSFVVPDAGSKNTTLSEESKVPSFDSGQRSGE 121
Query: 250 TELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGK--KPVNIGEIGPSRS 307
T ++++ E + S+ D +N++ A + S N S S+L G+ P N + S +
Sbjct: 122 TVKNSSLAEEGNGSVADDQNTLEANATTSVGN--SSSLVSDLGGRFVVPANTSKENGSVT 179
Query: 308 KD 309
+D
Sbjct: 180 ED 181
>At1g02305.1 68414.m00175 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
[Nicotiana rustica] GI:609175; contains Pfam profile
PF00112: Papain family cysteine protease
Length = 362
Score = 31.9 bits (69), Expect = 0.93
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Query: 1 MADQFCLRWN---NFQSNIVSALDSLKCSEDLVDVTLTCEGRNIKAHKVILSACSPYFRN 57
++D+FC+++N + N + A C + R K H V+ C PYF N
Sbjct: 143 LSDRFCIKYNMNVSLSVNDLLACCGFLCGQGCNGGYPIAAWRYFKHHGVVTEECDPYFDN 202
Query: 58 VFKENPCQHP 67
C HP
Sbjct: 203 ----TGCSHP 208
>At2g37570.1 68415.m04609 expressed protein
Length = 494
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 137 TISSRPHHNASHKDAKLPGLKKRRSSTSDKPNDVSVGDSYKKTKV-----LDTCDIPRLN 191
T+ S +SH++ L + R S P D+++ S +++ LD CDI +
Sbjct: 8 TLLSMDSSASSHEELDLE-MNNNRQSLLSGPPDINLPLSAERSPPPPPWNLDACDILDVG 66
Query: 192 NFSQSSKIDNVLPVENNVDKKCDGKNDS 219
SQ+ + +N + V V +KC + DS
Sbjct: 67 LGSQAYETENYMSVVPKVGRKCAKRVDS 94
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 392 SQIMSHQQSNHA-----AICGDCPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPRSF 446
SQ+ HQ S+ A C + P C ++N+ LK H+R H + C +C S
Sbjct: 142 SQLQKHQDSHVKLDSVEAFCSE-PGCMKYFTNEECLKSHIRSCHQHIN----CEIC-GSK 195
Query: 447 TMRETFKEHMWT 458
+++ K H+ T
Sbjct: 196 HLKKNIKRHLRT 207
>At5g16630.1 68418.m01947 DNA repair protein Rad4 family low
similarity to SP|Q01831 DNA-repair protein complementing
XP-C cells (Xeroderma pigmentosum group C complementing
protein) {Homo sapiens}; contains Pfam profile PF03835:
DNA repair protein Rad4
Length = 865
Score = 31.1 bits (67), Expect = 1.6
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 199 IDNVLPVENNVDKKCDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILS 258
IDNVL D+ C +D + S DC IP +DDN+ + + +
Sbjct: 64 IDNVLE-----DRGCGNVDDDEM-------NDSDWEDCPIPSLDSTVDDNNVDDTRELTI 111
Query: 259 EQDDSLPD 266
E DD +PD
Sbjct: 112 EFDDDVPD 119
>At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 287
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 387 GGASTSQIMSHQQSNHAAICGDCPHCGMKYSNQSALKYHVRLMHS 431
GG ST + QQ+ +A C C ++++ L+ H + HS
Sbjct: 240 GGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTKAKHS 284
>At4g26120.1 68417.m03760 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 600
Score = 31.1 bits (67), Expect = 1.6
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 38 GRNIKAHKVILSACSPYFRNVF---KENPCQHPVII-LKDVSAD------DIVSLLSYMY 87
GR + H+ ILSA P F++ KE V + LK+++ D +V++L+Y+Y
Sbjct: 76 GREVSFHRCILSARIPVFKSALATVKEQKSSTTVKLQLKEIARDYEVGFDSVVAVLAYVY 135
Query: 88 QGEV 91
G V
Sbjct: 136 SGRV 139
>At4g07520.1 68417.m01174 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 734
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/140 (18%), Positives = 56/140 (40%), Gaps = 4/140 (2%)
Query: 200 DNVLPVENNV-DKKCDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILS 258
+ V EN D+ C+ + L + S +V D PM+++ +++N E
Sbjct: 30 EEVAAEENKFEDENCEQEPPKNLHEPEEEKISEEVDD-EEPMQSQGMEENPEEEEKEGEE 88
Query: 259 EQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHN 318
E++ D M ++ + NP + + + ++ E PS + N +
Sbjct: 89 EEESEEGDDVEPMQSQGMEE--NPKEEEKEGEEEESEEIDDDEPMPSHGMEENPQEEEKE 146
Query: 319 NSSRSPIKNTSDEVQVKPER 338
+P + +E ++P+R
Sbjct: 147 REEENPEELDDEEQPMQPKR 166
>At3g25500.1 68416.m03171 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 1051
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 292 SGKKPVNIGEIGPSRSKDSNTETVS-HNNSSRSPIKNT--SDEVQVKPERQSPKSDVEYE 348
SG++P+N + + N +T+S ++SS SP ++T S + P+R PK V
Sbjct: 261 SGREPLNRVGLPGQNPRSVNNDTISCSSSSSGSPGRSTFISISPSMSPKRSEPKPPVIST 320
Query: 349 PE 350
PE
Sbjct: 321 PE 322
>At3g48360.1 68416.m05278 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 364
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 34 LTCEGRNIKAHKVILSACSPYFRNVFKE-----NPC-QHPVIILKDVSADDIVSLLSYMY 87
+T + R I AH +L++ SP N+ K+ C VI + V D + + ++Y
Sbjct: 39 VTSDNRRIPAHSGVLASASPVLMNIMKKPMRRYRGCGSKRVIKILGVPCDAVSVFIKFLY 98
Query: 88 QGEVFIEESKLSSFLHTAALLQVKGLTGVTQQ 119
+ +E + +H AL V +T + Q+
Sbjct: 99 SSSLTEDEMERYG-IHLLALSHVYMVTQLKQR 129
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 30.7 bits (66), Expect = 2.1
Identities = 63/306 (20%), Positives = 111/306 (36%), Gaps = 25/306 (8%)
Query: 111 KGLTGVTQQKENFTSPNTSNKLYTQLTISSRPHHNASHKDAKLPGLKKRRSSTSDKPNDV 170
KG T+ KE +S S T+ D + +K SS+ +K D
Sbjct: 429 KGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQEKNEDK 488
Query: 171 S---VGDSY-KKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKN-DSPLITAN 225
+ S+ ++TK + + + SQ + ++N + + D
Sbjct: 489 ETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIE 548
Query: 226 GKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPS-- 283
+ SSQ +T+ +++S++ T E+++ + E S N
Sbjct: 549 KEEASSQEESKENETETKEKEESSSQEET---KEKENEKIEKEESAPQEETKEKENEKIE 605
Query: 284 KSDSASNLSGK-KPVNIGEIGPSRSKDS--NTETVSHNNSSRSPIKNTSDEVQVKPERQS 340
K +SAS K K E S S +S N T S + +DE + +++
Sbjct: 606 KEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDEDTSESSKEN 665
Query: 341 PKSDVEYEPEVLLSE----HQDGDTENTYNQEQSQALLLL--------AGMSTVPGLGGG 388
SD E + SE +++G+TE T Q S + L + T+P G G
Sbjct: 666 SVSDTEQKQSEETSEKEESNKNGETEVTQEQSDSSSDTNLPQEVKDVRTDLETLPDSGNG 725
Query: 389 ASTSQI 394
S +
Sbjct: 726 GSNESV 731
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 322 RSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQDGDT-------ENTYNQEQSQALL 374
+S + NT+D + + +S S +E + L +G++ E +N ++ +
Sbjct: 345 KSVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIKSEGESMEKNELLEKEFNDSNGESSV 404
Query: 375 LLAGMSTVPGLGGGASTSQIMSHQQS 400
G ST G GG TS++ S ++S
Sbjct: 405 --TGKSTGSGDGGSQETSEVSSQEES 428
>At1g58025.1 68414.m06576 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487; contains
prenyl group binding site (CAAX box) Prosite:PS00294
Length = 769
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 293 GKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSP 341
GKK I E G N E + +SS +P++ + E++ K E +P
Sbjct: 10 GKKSKTINEQGNLNESTENAENQTSEHSSEAPVECENSELESKMEVDAP 58
>At5g61940.1 68418.m07775 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1094
Score = 30.3 bits (65), Expect = 2.8
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 253 STAILSEQDDSLPDYENSMLARSLLSGIN--PSKSDSASNLSGKKPVNIGEIGP---SRS 307
S +L + S+ Y+ S+ +N PSKSDS + LS + + + S
Sbjct: 95 SLFLLGQMLGSVLYYKKSLKKAKQGLSVNSLPSKSDSVAQLSLQAQRELDKKNKALLSLI 154
Query: 308 KDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPKSD 344
D+ +E S S +KNT +V + Q P+ D
Sbjct: 155 NDAESEIASSKTLVGSTVKNTKPKVVESKKSQDPRED 191
>At3g12020.1 68416.m01490 kinesin motor protein-related similar to
putative kinesin heavy chain GB:AAD23684 GI:4567271 from
[Arabidopsis thaliana]
Length = 1030
Score = 30.3 bits (65), Expect = 2.8
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 67 PVIILKDVSADDIVSLLSYMYQGEVFIEESKLSSFLHTAALLQVKGLTGVTQQKENFTSP 126
PV LKD+ ADDIV L + G+V KL S L + L+ + Q+
Sbjct: 427 PVPQLKDIGADDIVLLKQKLEDGQV-----KLQSRLEEEEEAKAALLSRI-QRLTKLILV 480
Query: 127 NTSNKLYTQLTISSRPHHNASHKDAKLPGLK-KRRSSTSDKPNDVSV 172
+T N ++L P S + +L L KRR D+ D+ V
Sbjct: 481 STKNPQASRLPHRFNPRRRHSFGEEELAYLPYKRRDMMDDEQLDLYV 527
>At3g03680.1 68416.m00371 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1017
Score = 30.3 bits (65), Expect = 2.8
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
Query: 161 SSTSDKPNDVSVG-DSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDS 219
++T +KP +++ D K+T+ T + + + + P E D D K
Sbjct: 152 AATEEKPPEIAKAEDGKKETEAAKTEEKKEGDKKEEEKPKEEAKPDEKKPDAPPDTKAKK 211
Query: 220 PLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLAR 274
P ++V + IP K E + N + ++ QD D E L R
Sbjct: 212 PDTAVAPPPPPAEVKNPPIPQKAETVKQNELGIKPENVNRQDLIGSDLELPSLTR 266
>At2g39260.1 68415.m04821 MIF4G domain-containing protein similar to
hUPF2 [Homo sapiens] GI:12232320; contains Pfam profile
PF02854: MIF4G domain
Length = 1186
Score = 30.3 bits (65), Expect = 2.8
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 187 IPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLD 246
I +L +S D V +E + D K K+ S +I++NGKST+ + + E
Sbjct: 886 ILQLEEREHASSGDKV-SIERHSDTKPSNKSSSDVISSNGKSTAKDIRENGEAHGEE--S 942
Query: 247 DNSTELSTAILSEQDDSLPD 266
D+ + + + Q++ L D
Sbjct: 943 DSDSGSGSVVRDGQNEELDD 962
>At2g36350.1 68415.m04461 protein kinase, putative similar to
protein kinase KIPK (KCBP-interacting protein kinase)
[Arabidopsis thaliana] gi|7716430|gb|AAF68383
Length = 949
Score = 30.3 bits (65), Expect = 2.8
Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 10/184 (5%)
Query: 253 STAILSEQDDSLPDYENSMLARSLLSGINPSKSDS--ASNLSGKKPVNIGEIGPSRSKDS 310
+T ++ E D SL + +L + + + +++ SN S N+ I + +
Sbjct: 378 ATKMVEEVDTSLEPSASQLLCQKCHCAVKSTSTENHPPSNTSHTTDKNVS-IEADQESLA 436
Query: 311 NTETVSHNNSSRSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQD-GDTENTYNQEQ 369
+ + ++ K +SD +V S ++ + + EV S + GD +
Sbjct: 437 SPRLIRIVKCNKEASKGSSDSCEVS---DSGEAVIVMKQEVSPSNYSGKGDADEQIRANP 493
Query: 370 SQALLLLAGMSTVPGLGGGASTSQIMSHQQSNHAAICGDCPHCGMKYSNQSALKYHVRLM 429
+ + +S+ LG +S++ MS + + CG+ PH M A+K HV+L
Sbjct: 494 TSSEKFDFSLSSKNSLGDYSSSTS-MSEESNLSRFSCGNKPHMSMDV-RWEAVK-HVKLQ 550
Query: 430 HSDL 433
+ L
Sbjct: 551 YGSL 554
>At2g19240.1 68415.m02246 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 840
Score = 30.3 bits (65), Expect = 2.8
Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 15/158 (9%)
Query: 217 NDSPLITANGKSTSSQVH-DCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARS 275
N SP+ + + +S Q++ DC + + E + TE + D+ S
Sbjct: 534 NSSPVTQSLLEDSSEQLNVDCHVTVNKENIHPQETEENIMEFHSADEE-----------S 582
Query: 276 LLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVK 335
++SG +PS+ S +L PV + S S + + +S + + + V
Sbjct: 583 IVSGSSPSEESSFVSLDPTSPVRCSTKIENDSVSSAGSNLLPDEDDKSIVSISEENSSVS 642
Query: 336 PERQSPKSDVEYEPEVL---LSEHQDGDTENTYNQEQS 370
+ SP D Y + L D D + + N S
Sbjct: 643 SDPISPAIDSNYSGKYLDCCTGSENDKDQQTSVNSPLS 680
>At1g19140.2 68414.m02381 expressed protein
Length = 312
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 264 LPDYENSMLARSLLSGINPSK-SDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
LP ++++ S SG+ S + + GK+ VN + GP+ S + T + SR
Sbjct: 23 LPKLRSTIIPSSYTSGLCTSSIGGNTESPMGKQSVNPNQSGPTASSSTGTGEGQRRHESR 82
Query: 323 SPIKNTSDE 331
P +E
Sbjct: 83 KPRAEFQEE 91
>At1g19140.1 68414.m02380 expressed protein
Length = 311
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 264 LPDYENSMLARSLLSGINPSK-SDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
LP ++++ S SG+ S + + GK+ VN + GP+ S + T + SR
Sbjct: 23 LPKLRSTIIPSSYTSGLCTSSIGGNTESPMGKQSVNPNQSGPTASSSTGTGEGQRRHESR 82
Query: 323 SPIKNTSDE 331
P +E
Sbjct: 83 KPRAEFQEE 91
>At5g18550.1 68418.m02193 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 456
Score = 29.9 bits (64), Expect = 3.7
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 267 YENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIK 326
+++S+ + SL +PS S P ++G + PS S D TE +S +SS PI
Sbjct: 359 FDHSLGSSSL--SYSPSPSSLTDMPVAPYPSSLGTLAPSSSSDQCTELIS--SSSIEPIT 414
Query: 327 NTSDEVQ-VKPERQSPKSDVEYEPEVLLSEHQDGDT 361
T+ + V S SDV + PE +E GD+
Sbjct: 415 TTTGGSETVAAGVSSMTSDVSH-PEP--AETNKGDS 447
>At5g06780.1 68418.m00766 emsy N terminus domain-containing protein
/ ENT domain-containing protein contains Pfam profile
PF03735: ENT domain
Length = 320
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 262 DSLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSS 321
DS P N ++ L ++PS + SAS K + IG +RSK N VS N +
Sbjct: 74 DSRPRGGNQVVRHQSLD-VHPSPTFSASRKKQKTFQSYPSIGSTRSKSFNNRVVSANEPA 132
Query: 322 RSPI 325
+ I
Sbjct: 133 EALI 136
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 29.9 bits (64), Expect = 3.7
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 281 NPSKSDSASNLSGKKPVNIG-EIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQV-KPER 338
+PSKS S S LS K+ V+ + P RS+ + + N RSP K + + R
Sbjct: 373 HPSKSRSRS-LSPKRTVSKSTSVSPRRSQSKSPSSSPRWNGGRSPAKGSRQVKNLTNSRR 431
Query: 339 QSPKSD 344
+SP S+
Sbjct: 432 ESPGSE 437
Score = 29.5 bits (63), Expect = 4.9
Identities = 51/222 (22%), Positives = 82/222 (36%), Gaps = 12/222 (5%)
Query: 138 ISSRPHHNASHKDAKLPGLKKRRSSTSDKPNDV--SVGDSYKKTKVLDTCD-IPRLNNFS 194
+SS H + K RRS DK ++ S+ D K K + D + N+ S
Sbjct: 236 LSSSSHERQKKRKRSSKKDKHRRSKQRDKRHEKKRSMRDKRPKRKSRRSPDSLEDSNSGS 295
Query: 195 QSSKIDNVLPVENNVDKKCDGK---NDSPLITANGKSTSSQVHDCSIPMKTEVLDDN--S 249
++S D + + K + N +P + +S ++ L N S
Sbjct: 296 EASLSDVNVEIGAKKRKHRVSRRTGNSAPAVEKEAESLHQGKRKGPDLLENRGLRSNGIS 355
Query: 250 TELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSAS--NLSGKKPVNIGEIGPSRS 307
S I Q D + D+ + +RSL SKS S S K P + RS
Sbjct: 356 DAASEQISDRQPDIVDDHPSKSRSRSLSPKRTVSKSTSVSPRRSQSKSPSSSPRWNGGRS 415
Query: 308 KDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPKSDVEYEP 349
+ V + +SR ++ E + + R+SP V P
Sbjct: 416 PAKGSRQVKNLTNSRR--ESPGSEEKGRHVRRSPTKSVSRSP 455
>At4g24480.1 68417.m03509 serine/threonine protein kinase, putative
similar to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 963
Score = 29.9 bits (64), Expect = 3.7
Identities = 18/40 (45%), Positives = 21/40 (52%)
Query: 319 NSSRSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQD 358
N SRS T+ VKP R S SD + E E+LLS D
Sbjct: 107 NLSRSSSTTTTHGRGVKPTRFSMSSDADEERELLLSSPAD 146
>At3g14010.1 68416.m01769 hydroxyproline-rich glycoprotein family
protein similar to Mrs16p (GI:2737884) [Saccharomyces
cerevisiae]; weak similarity to ataxin-2 related protein
(GI:1679686) [Homo sapiens]
Length = 595
Score = 29.9 bits (64), Expect = 3.7
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 10/111 (9%)
Query: 298 NIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQ 357
NI E + N E VSHNN RS ++TS +K +S V E +
Sbjct: 357 NISESQLDEQRRKNNEEVSHNN--RSAEESTSGHGDIKEGAKSGGGASSVSKAVTERERE 414
Query: 358 DGD------TENTYNQEQSQALLLLAGMSTV--PGLGGGASTSQIMSHQQS 400
+E+++ Q S++ G ST PGL +S + S ++S
Sbjct: 415 ASQVSSKTKSESSFGQSASRSSESRPGPSTSSRPGLSPSSSIGSMASSEKS 465
>At1g75410.1 68414.m08760 BEL1-like homeodomain 3 protein (BLH3)
identical to BEL1-like homeodomain 3 (GI:13877515)
[Arabidopsis thaliana]
Length = 524
Score = 29.9 bits (64), Expect = 3.7
Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 12/186 (6%)
Query: 217 NDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSL 276
N S + NGKS S H + + V ++N + + +S+L
Sbjct: 115 NPSTMSDENGKSLSVHQHHSDQILPSSVYNNNGNN-GVGFYNNYRYETSGFVSSVLRSRY 173
Query: 277 LSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKP 336
L P++ +S +K + +G K + HN SS + ++ D+ Q +
Sbjct: 174 LK---PTQQLLDEVVSVRKDLKLGNKKMKNDKGQDF----HNGSSDNITED--DKSQSQE 224
Query: 337 ERQSPKSDVEYEPEVLLSEHQDGDTENTYNQEQSQALLLLAGMSTVPGLGGGASTSQIMS 396
S + +++ + LL+ + D YNQ Q L + V GLG + +
Sbjct: 225 LSPSERQELQSKKSKLLTMVDEVDKR--YNQYHHQMEALASSFEMVTGLGAAKPYTSVAL 282
Query: 397 HQQSNH 402
++ S H
Sbjct: 283 NRISRH 288
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 29.9 bits (64), Expect = 3.7
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 221 LITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYEN--SMLARS--- 275
++T N S++ CS + ++D + + T+IL+ D PD +++ +S
Sbjct: 1937 ILTKNSSSSNFPGCGCSPDVAKSMIDGGTIQCLTSILNVIDLDHPDAPKLVTLILKSLET 1996
Query: 276 LLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTET--VSHNNSSRSPIKNTSDEVQ 333
L N ++ + + +K + E S ++TE ++ NNSS + + D Q
Sbjct: 1997 LTRAANAAEQLKSEVPNEQKNTDSDERHDSHGTSTSTEVDELNQNNSSLQQVTDAVDNGQ 2056
Query: 334 VKPERQS 340
+P+ S
Sbjct: 2057 EQPQVSS 2063
>At1g14380.2 68414.m01705 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 602
Score = 29.9 bits (64), Expect = 3.7
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 283 SKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPK 342
++SD A++ S K E P KD +S + K + K ++ P
Sbjct: 309 NESDKANHNSRKSRSGSKEGSPLEIKDEKPSPSLKRSSLSNGSKKATLRSAEKKKKDIPD 368
Query: 343 SDVEYEPEVLLSEH--QDGDTENTYNQEQ 369
S V+ +PE +SE+ ++GD + +E+
Sbjct: 369 SSVQIQPEGKVSENVLEEGDNIESSGKEK 397
>At1g09000.1 68414.m01004 NPK1-related protein kinase, putative
(ANP1) similar to protein kinase [Nicotiana tabacum]
gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
protein kinase 1S GI:2342422
Length = 666
Score = 29.9 bits (64), Expect = 3.7
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
Query: 183 DTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLIT--------ANGKSTSSQVH 234
D C I N + ++ + L + ++ K CD +D + NG+ S+
Sbjct: 409 DMCLIDDENFLTFDGEMSSTLEKDCHLKKSCDDISDMSIALKSKFDESPGNGEKESTMSM 468
Query: 235 DCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGK 294
+C P +E D+ + A L E+ L + + S I S S SNLS
Sbjct: 469 ECDQPSYSEDDDELTESKIKAFLDEKAADLKKLQTPLYEEFYNSLITFSPSCMESNLSNS 528
Query: 295 K 295
K
Sbjct: 529 K 529
>At1g02300.1 68414.m00173 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]
Length = 379
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Query: 1 MADQFCLRWN---NFQSNIVSALDSLKCSEDLVDVTLTCEGRNIKAHKVILSACSPYFRN 57
++D+FC+++N + +N V A L C K H V+ C PYF N
Sbjct: 160 LSDRFCIKYNLNVSLSANDVIACCGLLCGFGCNGGFPMGAWLYFKYHGVVTQECDPYFDN 219
Query: 58 VFKENPCQHP 67
C HP
Sbjct: 220 ----TGCSHP 225
>At4g35560.1 68417.m05053 expressed protein
Length = 917
Score = 29.5 bits (63), Expect = 4.9
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Query: 113 LTGVTQQKENFTSPNTSNKLYTQ--------LTISSRPHHNASHKDAKLPGLKKRRSSTS 164
++ V QKE F + N++Y + + SS P S + KR + T
Sbjct: 674 VSSVLPQKETFRLVESMNRVYKKDNSVCHEGIITSSSPREKKSMFGSVFKTKSKRTTDTE 733
Query: 165 DKPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCD 214
+ + ++ + +K+ T + P NN S +I+ + VE+ + D
Sbjct: 734 PESSKETIEEL---SKIFSTANFPWNNNVENSREINTITRVEDEEELDID 780
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 29.5 bits (63), Expect = 4.9
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 11/171 (6%)
Query: 174 DSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLI-TANGKSTSSQ 232
D+ K +C N S K D ++ +D + T GK T
Sbjct: 595 DNKKDPTKSKSCSADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDS 654
Query: 233 VHDCSIP-MKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNL 291
V + P +TE NST A+ ++ +NS ++ PS+ D S
Sbjct: 655 VSEEKQPGSRTE----NSTTKLDAVQEKRSSKPVTTDNSEKPVDIIC---PSQ-DKCSGK 706
Query: 292 SGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPK 342
++P+ G S +KD++ TVS + + S S +V++K QS K
Sbjct: 707 ELQEPLKDGNKLSSENKDASQSTVSQSAADASQ-PEASRDVEMKDTLQSEK 756
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 29.5 bits (63), Expect = 4.9
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 11/171 (6%)
Query: 174 DSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLI-TANGKSTSSQ 232
D+ K +C N S K D ++ +D + T GK T
Sbjct: 595 DNKKDPTKSKSCSADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDS 654
Query: 233 VHDCSIP-MKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNL 291
V + P +TE NST A+ ++ +NS ++ PS+ D S
Sbjct: 655 VSEEKQPGSRTE----NSTTKLDAVQEKRSSKPVTTDNSEKPVDIIC---PSQ-DKCSGK 706
Query: 292 SGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPK 342
++P+ G S +KD++ TVS + + S S +V++K QS K
Sbjct: 707 ELQEPLKDGNKLSSENKDASQSTVSQSAADASQ-PEASRDVEMKDTLQSEK 756
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 29.5 bits (63), Expect = 4.9
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 11/171 (6%)
Query: 174 DSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLI-TANGKSTSSQ 232
D+ K +C N S K D ++ +D + T GK T
Sbjct: 595 DNKKDPTKSKSCSADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDS 654
Query: 233 VHDCSIP-MKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNL 291
V + P +TE NST A+ ++ +NS ++ PS+ D S
Sbjct: 655 VSEEKQPGSRTE----NSTTKLDAVQEKRSSKPVTTDNSEKPVDIIC---PSQ-DKCSGK 706
Query: 292 SGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPK 342
++P+ G S +KD++ TVS + + S S +V++K QS K
Sbjct: 707 ELQEPLKDGNKLSSENKDASQSTVSQSAADASQ-PEASRDVEMKDTLQSEK 756
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 29.5 bits (63), Expect = 4.9
Identities = 46/221 (20%), Positives = 84/221 (38%), Gaps = 9/221 (4%)
Query: 151 AKLPGLKKRRSSTSDKPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVD 210
A L G+KK R + S + N++S + K TK D + + S K D +++
Sbjct: 249 AGLDGVKKERQAISARINELS--EKLKATK--DEITVLENELKTVSEKRDKAYSNIHDLR 304
Query: 211 KKCDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENS 270
++ D N + + + + E L + E ++ + + DYE
Sbjct: 305 RQRDETNSEYYQNRTVLNKARDLAAQKNISELEALANAEVEKFISLWCSKKNFREDYEKR 364
Query: 271 MLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSD 330
+L +SL S D +KP+ E PS++ S TE V + P +
Sbjct: 365 IL-QSLDS--RQLSRDGRMRNPDEKPLIAPEAAPSKATPSETEVVPKAKAKPQPKEEPVS 421
Query: 331 EVQVKPERQSPKSDVEYEPEVLLSEHQDGDTENTYNQEQSQ 371
KP+ ++ + + V + D D + Y + Q
Sbjct: 422 --APKPDATVAQNTEKAKDAVKVKNVADDDDDEVYGLGKPQ 460
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 257 LSEQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTE 313
+S D+L ++S L+ L SKS S+ N S P+ +GE+ SK SNT+
Sbjct: 400 ISSSTDALSPLDSSNLSHVTLP---KSKSASSENGSMLAPLKVGEVQLLASKASNTK 453
>At3g52100.1 68416.m05717 PHD finger family protein contains Pfam
profile PF00628: PHD-finger
Length = 696
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 294 KKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKPER----QSPKSDVEYEP 349
+KP+ + I SR +DS++E + + S +K + + P + S DV
Sbjct: 421 EKPLRVLRIKSSRPQDSDSEKFGKHATELSTVKAKKLVISIGPRKTGVTNSTSCDVSKTA 480
Query: 350 EVLLSEHQDGDTENTYNQEQSQALL 374
+ + E T+++E+ ++LL
Sbjct: 481 SKSNGKQEKLQAEETFSREERRSLL 505
>At3g49590.2 68416.m05420 expressed protein
Length = 603
Score = 29.5 bits (63), Expect = 4.9
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 264 LPDYENSMLARSLLSGINPSKSDSASNL-SGKKPVNIGEIGPSRSKDSNTETVS----H- 317
+P ++ R LSG+N KSD NL G +P + ++ ++ + H
Sbjct: 34 IPSLQSRGRTRERLSGLNVRKSDKWFNLVMGDRPAALEKLHSWHRNILDSMIIDIILVHP 93
Query: 318 -NNSSRSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQDGDTENTYNQEQSQALLLL 376
+N + + SD V E + V+YE +++S Q D+ Y + ++++LL
Sbjct: 94 ISNDNLDDDDDHSDSVVRSAETVIERWVVQYENPLIMSP-QSSDSATRYQKVYKKSIILL 152
Query: 377 AGM 379
+
Sbjct: 153 RSL 155
>At3g49590.1 68416.m05419 expressed protein
Length = 603
Score = 29.5 bits (63), Expect = 4.9
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 264 LPDYENSMLARSLLSGINPSKSDSASNL-SGKKPVNIGEIGPSRSKDSNTETVS----H- 317
+P ++ R LSG+N KSD NL G +P + ++ ++ + H
Sbjct: 34 IPSLQSRGRTRERLSGLNVRKSDKWFNLVMGDRPAALEKLHSWHRNILDSMIIDIILVHP 93
Query: 318 -NNSSRSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQDGDTENTYNQEQSQALLLL 376
+N + + SD V E + V+YE +++S Q D+ Y + ++++LL
Sbjct: 94 ISNDNLDDDDDHSDSVVRSAETVIERWVVQYENPLIMSP-QSSDSATRYQKVYKKSIILL 152
Query: 377 AGM 379
+
Sbjct: 153 RSL 155
>At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 551
Score = 29.5 bits (63), Expect = 4.9
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 153 LPGLKKRRSSTSDKPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKK 212
LP L + T+ P V S K T P ++F S + ++ D
Sbjct: 403 LPDLSAGKKKTTSSP----VSSSAKTTST-PVSSSPDTSSFLLSLSL---AADSSSSDSD 454
Query: 213 CDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSE--QDDSLPDYENS 270
+ S ++++ S+SS D+S+ +S+++ S ++ S PDY NS
Sbjct: 455 SSSPDSSSSVSSSPDSSSSVSSSPDSYSSFSSSPDSSSSVSSSLFSSSRENSSSPDYSNS 514
Query: 271 MLARSLLSGINPSKSDSASNL 291
+ + SG S SD +S++
Sbjct: 515 VSSSLDYSGSVSSSSDYSSSV 535
>At3g12860.1 68416.m01603 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 499
Score = 29.5 bits (63), Expect = 4.9
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 1/107 (0%)
Query: 226 GKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQ-DDSLPDYENSMLARSLLSGINPSK 284
G+ + CSI + + DNST L EQ ++ L Y+ + R + +
Sbjct: 369 GRIARFLANKCSIASRIDCFSDNSTTAFGEKLREQVEERLDFYDKGVAPRKNVDVMKEVL 428
Query: 285 SDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDE 331
+ G+K V+ E R + E S + K+ + E
Sbjct: 429 ENLEKKDEGEKTVDASEKKKKRKTEEKEEEKEEEKSKKKKKKSKAVE 475
>At2g38080.1 68415.m04674 laccase, putative / diphenol oxidase,
putative similar to diphenol oxidase [Nicotiana
tabacum][GI:1685087]
Length = 558
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 385 LGGGASTSQIMSHQQSNHAAICGDCPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPR 444
L G + + SH + H +CP G K S ++ Y +RL+++ L L +
Sbjct: 180 LKSGLAPNVSDSHMINGHPGPVRNCPSQGYKLSVENGKTYLLRLVNAALNEELFFKVAGH 239
Query: 445 SFTMRE 450
FT+ E
Sbjct: 240 IFTVVE 245
>At1g70100.3 68414.m08067 expressed protein
Length = 504
Score = 29.5 bits (63), Expect = 4.9
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 247 DNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSR 306
D +LST L E+ + + E+ ++ K D S + GE+ +
Sbjct: 171 DTGDDLSTLKLEEKLEEIVQVEDKEKVEEVICMKEEVKEDVPSK-------DTGEMSETL 223
Query: 307 SKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPKSD-VEYEP---EVLLSEHQDGDTE 362
K++ E HN PIK T V+ R SPKS+ V +P +V+ E
Sbjct: 224 MKETKKEK-DHN-----PIKKTDKNVRTNHMRASPKSNQVTKKPVTSKVVSGRKTQPSKE 277
Query: 363 NTYNQEQSQA---LLLLAGMSTVPGLGGGASTSQIMSHQQSN 401
+ + ++A +L G ST P + AST MS +S+
Sbjct: 278 KSMTKATNKAASPVLKPPGFST-PRVSKSASTISSMSTSRSS 318
>At1g70100.2 68414.m08066 expressed protein
Length = 482
Score = 29.5 bits (63), Expect = 4.9
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 247 DNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSR 306
D +LST L E+ + + E+ ++ K D S + GE+ +
Sbjct: 171 DTGDDLSTLKLEEKLEEIVQVEDKEKVEEVICMKEEVKEDVPSK-------DTGEMSETL 223
Query: 307 SKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPKSD-VEYEP---EVLLSEHQDGDTE 362
K++ E HN PIK T V+ R SPKS+ V +P +V+ E
Sbjct: 224 MKETKKEK-DHN-----PIKKTDKNVRTNHMRASPKSNQVTKKPVTSKVVSGRKTQPSKE 277
Query: 363 NTYNQEQSQA---LLLLAGMSTVPGLGGGASTSQIMSHQQSN 401
+ + ++A +L G ST P + AST MS +S+
Sbjct: 278 KSMTKATNKAASPVLKPPGFST-PRVSKSASTISSMSTSRSS 318
>At1g70100.1 68414.m08065 expressed protein
Length = 467
Score = 29.5 bits (63), Expect = 4.9
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 247 DNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSR 306
D +LST L E+ + + E+ ++ K D S + GE+ +
Sbjct: 171 DTGDDLSTLKLEEKLEEIVQVEDKEKVEEVICMKEEVKEDVPSK-------DTGEMSETL 223
Query: 307 SKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPKSD-VEYEP---EVLLSEHQDGDTE 362
K++ E HN PIK T V+ R SPKS+ V +P +V+ E
Sbjct: 224 MKETKKEK-DHN-----PIKKTDKNVRTNHMRASPKSNQVTKKPVTSKVVSGRKTQPSKE 277
Query: 363 NTYNQEQSQA---LLLLAGMSTVPGLGGGASTSQIMSHQQSN 401
+ + ++A +L G ST P + AST MS +S+
Sbjct: 278 KSMTKATNKAASPVLKPPGFST-PRVSKSASTISSMSTSRSS 318
>At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 713
Score = 29.5 bits (63), Expect = 4.9
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 203 LPVENNVDKKCDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDD 262
L + N+ + K D N+S +G+S S++ D + ++ D +S + S SE+ D
Sbjct: 98 LQIPNDCNYKNDALNNSNS-PKHGESEDSEMTDKDVSKRSGGTDSSSRDGSPLPTSEESD 156
Query: 263 SLP---DYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNN 319
P D+ L+ LL S+ D+A++ P + E +D T + +N
Sbjct: 157 PRPKHQDWTEKQLSDHLLLYEFESEYDAANH----TPESYTEQAAKNVRDI-TASEQPSN 211
Query: 320 SSRSPIKNTS--DEVQVKPERQSP 341
++R I S E P+ Q P
Sbjct: 212 AARKRICGDSFIQESSPNPKTQDP 235
>At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 714
Score = 29.5 bits (63), Expect = 4.9
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 203 LPVENNVDKKCDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDD 262
L + N+ + K D N+S +G+S S++ D + ++ D +S + S SE+ D
Sbjct: 98 LQIPNDCNYKNDALNNSNS-PKHGESEDSEMTDKDVSKRSGGTDSSSRDGSPLPTSEESD 156
Query: 263 SLP---DYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNN 319
P D+ L+ LL S+ D+A++ P + E +D T + +N
Sbjct: 157 PRPKHQDWTEKQLSDHLLLYEFESEYDAANH----TPESYTEQAAKNVRDI-TASEQPSN 211
Query: 320 SSRSPIKNTS--DEVQVKPERQSP 341
++R I S E P+ Q P
Sbjct: 212 AARKRICGDSFIQESSPNPKTQDP 235
>At5g47660.1 68418.m05884 DNA-binding protein-related similar to
GTL1 [Arabidopsis thaliana] GI:2664198
Length = 398
Score = 29.1 bits (62), Expect = 6.5
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 239 PMKTEVLD-DNSTELSTAILSEQDDSLPDYENSMLARSLLS--GINPSKSDSASN 290
P+ +++ D + S +L+ E+DDSLP + AR+ +S G++ S S +S+
Sbjct: 101 PLGSKIADVEESGQLTRGFSKEEDDSLPPLQMEFQARNRISWDGLSLSSSVDSSD 155
>At5g24630.1 68418.m02909 expressed protein ; expression supported
by MPSS
Length = 531
Score = 29.1 bits (62), Expect = 6.5
Identities = 31/172 (18%), Positives = 63/172 (36%), Gaps = 2/172 (1%)
Query: 193 FSQSSKIDNVLPVENNVDKKCDGKN-DSPLITANGKSTSSQVHDC-SIPMKTEVLDDNST 250
FS+ K D L +E++ K +G N D +++ K + +E
Sbjct: 137 FSRKKKADASLNLEDSCAGKENGNNVDCEKLSSKHKDAQGGADSVWLVSSDSEPSSPIKQ 196
Query: 251 ELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDS 310
E++ + + D L E +++ +P +S + K+ + EI + KD+
Sbjct: 197 EVTVSTEKDADFVLEATEEEPAVKTVRKEKSPKTKSKSSRKTPKEGNSAQEILKTEDKDT 256
Query: 311 NTETVSHNNSSRSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQDGDTE 362
+T +SP + + E + ++ E H D D +
Sbjct: 257 DTTIAEQVTPEKSPKTKSKSSRKTPKEENCAQEILKTEGTQRFLYHADKDKD 308
>At4g39860.2 68417.m05648 expressed protein
Length = 298
Score = 29.1 bits (62), Expect = 6.5
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 257 LSEQDDSLPDYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVS 316
+ + D+ D + + L+G++ + N+S KKP + E+ R N T +
Sbjct: 87 VGSESDATTDPKTGLRYYQTLNGMSQISFSADGNVSPKKPTTLTEVAKQRELSGNLLTEA 146
Query: 317 HNNSSRSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQD 358
S++ I + E + +P S++ +P L++ Q+
Sbjct: 147 DLKSNKQ-ISSAKIEEISGHDIFAPPSEI--QPRSLVAAQQE 185
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 29.1 bits (62), Expect = 6.5
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 223 TANGKSTSSQVHDCSIP-MKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGIN 281
T GK T V + P +TE NST A+ ++ +NS ++
Sbjct: 643 TDTGKETQDSVSEEKQPGSRTE----NSTTKLDAVQEKRSSKPVTTDNSEKPVDIIC--- 695
Query: 282 PSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSP 341
PS+ D S ++P+ G S +KD++ TVS + + S S +V++K QS
Sbjct: 696 PSQ-DKCSGKELQEPLKDGNKLSSENKDASQSTVSQSAADASQ-PEASRDVEMKDTLQSE 753
Query: 342 K 342
K
Sbjct: 754 K 754
>At3g13020.1 68416.m01622 hAT dimerisation domain-containing protein
contains Pfam profile: PF04937 domain of unknown
function (DUF659), weak hit to PF05699: hAT family
dimerisation domain
Length = 605
Score = 29.1 bits (62), Expect = 6.5
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 409 CPHCGMKYSNQSALKYHVRLMHSDLTNRLCCYLCPRSFTMRETFK 453
C +CG + ++ LK+H+ + +D+T+ C + S T+RETF+
Sbjct: 24 CNYCGKEMNSFHRLKHHLGAVGTDVTH--CDQV---SLTLRETFR 63
>At2g28290.2 68415.m03434 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3529
Score = 29.1 bits (62), Expect = 6.5
Identities = 45/239 (18%), Positives = 99/239 (41%), Gaps = 19/239 (7%)
Query: 114 TGVTQQKENFTSPNTSNKLYTQLTISSRPHHNASHKDAKLPGLKKRRSSTSDKPNDV-SV 172
+ +TQ+ E TS + + T + P +AS +++P + +S D+ + V S
Sbjct: 1558 SSITQRTETATSLASD----AEATKFALPR-SASEIVSRVPKANEGSTSNPDQVSPVHSA 1612
Query: 173 GDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLI---TANGKST 229
+ + K D D+ F S + + +EN+ ++K PLI ++
Sbjct: 1613 TTALRSDKAADK-DLDAPPGFDSGSHVQTLNVLENSSERKAFAVKKRPLIQGVSSQHPGP 1671
Query: 230 SSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSAS 289
+ Q D + + +L + A+ S D S E + L G+ + SD+
Sbjct: 1672 NKQPLDLPVSTSSTLLGGGPVQNQNAVSSVCDGSKSPSEGR--TYTALQGVTTAPSDATL 1729
Query: 290 NLSGKK-----PVNIGEIGPS-RSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPK 342
+S + P++ +G + ++++N ++ ++ ++N + P+RQ +
Sbjct: 1730 PMSSQPSDATLPMSSQPVGSTVEAQEANVPSLPAALPAKRRVRNLPSRGET-PKRQGKR 1787
>At2g28290.1 68415.m03433 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3574
Score = 29.1 bits (62), Expect = 6.5
Identities = 45/239 (18%), Positives = 99/239 (41%), Gaps = 19/239 (7%)
Query: 114 TGVTQQKENFTSPNTSNKLYTQLTISSRPHHNASHKDAKLPGLKKRRSSTSDKPNDV-SV 172
+ +TQ+ E TS + + T + P +AS +++P + +S D+ + V S
Sbjct: 1558 SSITQRTETATSLASD----AEATKFALPR-SASEIVSRVPKANEGSTSNPDQVSPVHSA 1612
Query: 173 GDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSPLI---TANGKST 229
+ + K D D+ F S + + +EN+ ++K PLI ++
Sbjct: 1613 TTALRSDKAADK-DLDAPPGFDSGSHVQTLNVLENSSERKAFAVKKRPLIQGVSSQHPGP 1671
Query: 230 SSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSMLARSLLSGINPSKSDSAS 289
+ Q D + + +L + A+ S D S E + L G+ + SD+
Sbjct: 1672 NKQPLDLPVSTSSTLLGGGPVQNQNAVSSVCDGSKSPSEGR--TYTALQGVTTAPSDATL 1729
Query: 290 NLSGKK-----PVNIGEIGPS-RSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQSPK 342
+S + P++ +G + ++++N ++ ++ ++N + P+RQ +
Sbjct: 1730 PMSSQPSDATLPMSSQPVGSTVEAQEANVPSLPAALPAKRRVRNLPSRGET-PKRQGKR 1787
>At2g25640.1 68415.m03073 transcription elongation factor-related
contains weak similarity to transcription elongation
factors
Length = 643
Score = 29.1 bits (62), Expect = 6.5
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 8/168 (4%)
Query: 152 KLPGLKKRRSSTSDKPNDVSVGDSYKKTKVLDTCDIPRLNNFSQ-SSKIDNVLP---VEN 207
K G+K +S+++ ++ G + T +P + + + S ID+ P + +
Sbjct: 407 KTLGVKNELNSSNESTGPIN-GVTIDDEMQAATGSLPPIVSLDEFMSSIDSESPSGFLSS 465
Query: 208 NVDKK--CDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLP 265
+ +KK ND + + S+ + C+ P+K E L + + S+ + +E D +
Sbjct: 466 DTEKKPSVSDNNDVEEVLVSSPKESANIDLCTSPVKAEALSPLTAKASSPVNAEDADIVS 525
Query: 266 DYENSMLARSLLSGINPSKSDSASNLSGKKPVNIGE-IGPSRSKDSNT 312
+S L S P + P + IG RS + T
Sbjct: 526 SKPSSDLKSKTTSVFIPDGERLWEGVLQLSPSTVSSVIGILRSGEKTT 573
>At2g03630.1 68415.m00323 hypothetical protein
Length = 252
Score = 29.1 bits (62), Expect = 6.5
Identities = 35/157 (22%), Positives = 53/157 (33%), Gaps = 12/157 (7%)
Query: 280 INPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKNTSDEVQVKPERQ 339
++ K D N G G++ TETV N+ S S + ++S
Sbjct: 10 LSKQKHDQDVNKKGSLDDENGDVEHKTIPLQETETVIINSESHSRLSSSSSSSSSSSSYL 69
Query: 340 SPKSDVEYE--------PEVLLSEHQ--DGDTENTYNQEQSQALLLLAGMSTVPGLGGGA 389
SP D+ E PE+ Q D D Y+ + + + S VP
Sbjct: 70 SPPKDLPEEVLKESLNDPEISSPPVQVMDRDNNGKYDPNRIPSSVFERSKSNVPAEWSCT 129
Query: 390 STSQIMSHQQSNHA--AICGDCPHCGMKYSNQSALKY 424
S + S N++ GD G Y + L Y
Sbjct: 130 SNESLFSIHLGNNSFTGYGGDLMKSGELYKSGELLAY 166
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 29.1 bits (62), Expect = 6.5
Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 11/149 (7%)
Query: 318 NNSSRSPIKNTSDEVQVKPERQSPKSDVEYEPEVLLSEHQDGDTENTYNQEQSQALLLLA 377
N + S I NT E +R + S+++ P L +E + + E +++ + L
Sbjct: 30 NLNQNSCINNTLIEPLPLIDRINLNSNLDLNPNPLYAEEGEQEEEEEEEEDREVDVDLHI 89
Query: 378 GMSTVPGLGGGASTSQIMSHQQSNHAAICGDCPHCGMKYSNQ-SALKYHVRLMHSDLTN- 435
G+ PG G ++ ++ + + A G N+ S Y + L
Sbjct: 90 GL---PGFGKPSNDAKQLKKRNGKEIATYD----AGKGIENELSGKAYWIPAPEQILIGF 142
Query: 436 -RLCCYLCPRSFTMRETFKEHMWTSHGQR 463
C++C ++F + HMW HG +
Sbjct: 143 THFSCHVCFKTFNRYNNLQMHMW-GHGSQ 170
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 29.1 bits (62), Expect = 6.5
Identities = 47/252 (18%), Positives = 98/252 (38%), Gaps = 13/252 (5%)
Query: 93 IEESKLSSFLHTAALLQVKGLTGVTQQKENFTSPNTSNKLYTQLTISSRPHHNASHKDAK 152
+EE+ S + + K ++ + E + P+ Q ++ P +AS AK
Sbjct: 1292 MEENTPSDLANGNKKKEPKSVSKLDLGSEKVSIPSNLVNGNEQHDLNIAPGEDASA--AK 1349
Query: 153 LPGLKKRRSSTSDKPNDVSVGDSYKKTKVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKK 212
P K+ RS N++ +G +K+K D + ++ +D + ++ N
Sbjct: 1350 QPEKKRSRSKKRKSGNNLDLG-KMEKSKPSDLANENEQTEPKSANNLD-LGNMKENTPSD 1407
Query: 213 CDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAILSEQDDSLPDYENSML 272
+N+ + S + + S+P+ D + +TA + S
Sbjct: 1408 LANENEQTELRLPNNSDYGNMEE-SLPLNL-ANGDEQPDPTTAPMEAAKQPKKKRSRSKK 1465
Query: 273 ARSL----LSGINPSK-SDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSRSPIKN 327
+S+ L + +K SD A+ K P ++ + P + K+S + N P N
Sbjct: 1466 CKSVNNLDLGNMEENKPSDLANGNEQKDPESVNRLDPGKEKESIPSNLVSGN--EQPDSN 1523
Query: 328 TSDEVQVKPERQ 339
T+ + K +++
Sbjct: 1524 TAPAKKPKKKKR 1535
>At5g48510.1 68418.m05998 speckle-type POZ protein-related
contains Pfam PF00651 : BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 224
Score = 28.7 bits (61), Expect = 8.6
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 37 EGRNIKAHKVILSACSPYFRNVFK 60
EG I AHK+IL++ S F+N+F+
Sbjct: 35 EGSAISAHKLILASRSEVFKNMFE 58
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 281 NPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSS-RSPIKNTSDEVQVKPERQ 339
NP S S + + ++ E P+ + + T + + ++ K + +VKP +
Sbjct: 8 NPPTSISTDDFTSSDDEDVPEAVPAPAPTAVTANGNAGAAVVKADTKPKAKPAEVKPAEE 67
Query: 340 SPKSDVEYEPEVLLSEHQDGDTENTYNQEQSQA 372
P+SD E E + +D D+E + ++ +
Sbjct: 68 KPESDEEDESDDEDESEEDDDSEKGMDVDEDDS 100
>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 442
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 14 SNIVSALDSLKCSEDLVDVTLTCEGRNIKAHKVILSACSPYF 55
SN+ L +L S DV +G AHK++L+ SP F
Sbjct: 187 SNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVF 228
>At4g20160.1 68417.m02949 expressed protein ; expression supported
by MPSS
Length = 1188
Score = 28.7 bits (61), Expect = 8.6
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 280 INPSKSDSASNLSGKKPVNIGEIGPSRSKDSNT---ETVSHNN-SSRSPIKNTSDEVQVK 335
I +KS S G++ + G ++ K+S+ ET +H N + + IK DE K
Sbjct: 836 IERNKSQEVSQ--GEESASHGSRESAKEKNSSQQDDETSTHRNPNDKKGIKEPEDEESKK 893
Query: 336 PERQSPKSDVEYEPEVLLSEHQDGDTENTYNQEQ 369
ER+ +VE E V DG+ +E+
Sbjct: 894 VEREETGENVE-EASVEFVNDWDGNEMEEEEEEE 926
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 294 KKPVNIGEIGPSRSKDSNTETVSHNNSSRSP----------IKNTSDEVQVKPERQSPKS 343
+ P + E+G + +TETV H N + +K T EV V+
Sbjct: 70 ESPAVVEEVGAVVKAEESTETVKHENGEKGAEQVELKEPILVKETVAEVNVETVDTEKAE 129
Query: 344 DVEYEPEVLLSEHQDGDTENTYNQEQS 370
+ + VL+ +H+D + + +S
Sbjct: 130 EKQTVENVLIEDHKDQEETKIVDVSES 156
>At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7)
(SOS1) identical to putative Na+/H+ antiporter SOS1
[Arabidopsis thaliana] gi|8515714|gb|AAF76139; Member of
The Monovalent Cation:Proton Antiporter (CPA1) Family,
PMID:11500563
Length = 1146
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 191 NNFSQSSKIDNVLPVENNVDKKCDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNST 250
NN Q + + LP+ N K++S ++T K ++ H C +P+K E +T
Sbjct: 1060 NNKLQDNLLYKKLPL-NPAQGLVSAKSESSIVTK--KQLETRKHACQLPLKGESSTRQNT 1116
Query: 251 ELSTAILSEQDDSL 264
+ ++ ++D+ +
Sbjct: 1117 MVESSDEEDEDEGI 1130
>At1g64570.1 68414.m07319 expressed protein
Length = 1239
Score = 28.7 bits (61), Expect = 8.6
Identities = 42/223 (18%), Positives = 87/223 (39%), Gaps = 15/223 (6%)
Query: 108 LQVKGLTGVTQQKENFTSPNTSNKLYTQLTISSRPHHNASHKDA----KLPGL-KKRRSS 162
+ V G V+ + + ++P + L L+ SS +N A + P + + +
Sbjct: 987 IPVTGRNDVSLEPFSSSTPGKNVNLDIYLSTSSSKVNNGGSVSAANISEAPDICMAQLND 1046
Query: 163 TSDKPNDVSVGDSYKKT--KVLDTCDIPRLNNFSQSSKIDNVLPVENNVDKKCDGKNDSP 220
S+ P D+ + ++ D ++ + + S D+ + E +V+ +C+ DS
Sbjct: 1047 GSEVPGSAPPSDNISRCIEEMADQSNLGIVMEQEELSDSDDEMMEEEHVEFECEEMADSE 1106
Query: 221 LITANGKSTSSQVHDCSIPMKTEVLDDNSTELSTAI-LSEQDDSLPDYENSMLARSLLSG 279
G + + V++ ST++ + L + + P +R L S
Sbjct: 1107 --GEEGSECEENIEMQDKDNRNSVVEITSTDVDSGKELGKDSPNSPWLSLDPSSRRLSSN 1164
Query: 280 INPSKSDSASNLSGKKPVNIGEIGPSRSKDSNTETVSHNNSSR 322
+ + A+N I + GPSRS+ T S + S+
Sbjct: 1165 VKDREKIEATN-----ETTISQFGPSRSRKKGTPVKSRDAESK 1202
>At1g13680.1 68414.m01608 expressed protein
Length = 317
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 212 KCDGKNDSPLITANGKSTSSQVHDCSIPMKTEVLDDNSTEL 252
+C + DS L+T K+ S H ++P+K ++NS +L
Sbjct: 224 ECSNRADSALLTDKTKALVSVNHFKTVPVKILTCEENSEQL 264
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.126 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,173,386
Number of Sequences: 28952
Number of extensions: 474120
Number of successful extensions: 1631
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 1576
Number of HSP's gapped (non-prelim): 128
length of query: 464
length of database: 12,070,560
effective HSP length: 84
effective length of query: 380
effective length of database: 9,638,592
effective search space: 3662664960
effective search space used: 3662664960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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