GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000315-TA|BGIBMGA000315-PA|undefined
         (130 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    22   5.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   7.8  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 76  KQCPNKENKSCC--CNHSHQITVLVITMTILFSACI 109
           ++CP  E  SCC  C     I+  V   T     C+
Sbjct: 24  RRCPKNEVYSCCAPCPQKACISEAVKCQTSCLPGCV 59


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 6   SNTEELGPYHSKFGGYERKYALPEAVVAIPEEPHDHNESI 45
           S+ +E G Y S    Y R   + E   A+P  P   + S+
Sbjct: 394 SHWQEEGVYWSLHYLYNRLRDISEETSALPSHPRRRSNSL 433


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.129    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,752
Number of Sequences: 2123
Number of extensions: 4791
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 2
length of query: 130
length of database: 516,269
effective HSP length: 57
effective length of query: 73
effective length of database: 395,258
effective search space: 28853834
effective search space used: 28853834
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)