GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000315-TA|BGIBMGA000315-PA|undefined
         (130 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39487-1|AAB08399.1| 1333|Homo sapiens xanthine dehydrogenase/ox...    29   3.5  
U06117-1|AAA75287.1| 1333|Homo sapiens xanthine dehydrogenase pr...    29   3.5  
D11456-1|BAA02013.2| 1333|Homo sapiens xanthine dehydrogenase pr...    29   3.5  
DQ089481-1|AAY68219.1| 1333|Homo sapiens xanthine dehydrogenase ...    29   3.5  
BC132760-1|AAI32761.1|  194|Homo sapiens hypothetical protein LO...    29   6.2  
AK125766-1|BAC86279.1|  194|Homo sapiens protein ( Homo sapiens ...    29   6.2  

>U39487-1|AAB08399.1| 1333|Homo sapiens xanthine
           dehydrogenase/oxidase protein.
          Length = 1333

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 15  HSKFGGYERKYALPEAVVAIPEEPHDHNESIWSGVKTECSRDQDATSIASSTHFTVVNGY 74
           H+ F GY +    PE ++   E P+      +S  K    R+ D   + S        G 
Sbjct: 387 HTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSAFKQASRREDDIAKVTSGMRVLFKPGT 446

Query: 75  TK 76
           T+
Sbjct: 447 TE 448


>U06117-1|AAA75287.1| 1333|Homo sapiens xanthine dehydrogenase
           protein.
          Length = 1333

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 15  HSKFGGYERKYALPEAVVAIPEEPHDHNESIWSGVKTECSRDQDATSIASSTHFTVVNGY 74
           H+ F GY +    PE ++   E P+      +S  K    R+ D   + S        G 
Sbjct: 387 HTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSAFKQASRREDDIAKVTSGMRVLFKPGT 446

Query: 75  TK 76
           T+
Sbjct: 447 TE 448


>D11456-1|BAA02013.2| 1333|Homo sapiens xanthine dehydrogenase
           protein.
          Length = 1333

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 15  HSKFGGYERKYALPEAVVAIPEEPHDHNESIWSGVKTECSRDQDATSIASSTHFTVVNGY 74
           H+ F GY +    PE ++   E P+      +S  K    R+ D   + S        G 
Sbjct: 387 HTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSAFKQASRREDDIAKVTSGMRVLFKPGT 446

Query: 75  TK 76
           T+
Sbjct: 447 TE 448


>DQ089481-1|AAY68219.1| 1333|Homo sapiens xanthine dehydrogenase
           protein.
          Length = 1333

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 15  HSKFGGYERKYALPEAVVAIPEEPHDHNESIWSGVKTECSRDQDATSIASSTHFTVVNGY 74
           H+ F GY +    PE ++   E P+      +S  K    R+ D   + S        G 
Sbjct: 387 HTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSAFKQASRREDDIAKVTSGMRVLFKPGT 446

Query: 75  TK 76
           T+
Sbjct: 447 TE 448


>BC132760-1|AAI32761.1|  194|Homo sapiens hypothetical protein
          LOC401296 protein.
          Length = 194

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 7/75 (9%)

Query: 22 ERKYALPEAVVAIPEEPHDHNESIWSGVKTECSRDQDATSIASSTHFTVVNGYTKQCPNK 81
          E + A P     IP  PH  + S   G+   CS       +A  T   V   +T  C + 
Sbjct: 18 EPRLAQPSLGRPIPRVPHPVSVSTDQGLPDTCS------GVAMGTSGRVSVAHTAVCRHT 71

Query: 82 EN-KSCCCNHSHQIT 95
          E   +C C H H  T
Sbjct: 72 EGMHACVCAHLHVFT 86


>AK125766-1|BAC86279.1|  194|Homo sapiens protein ( Homo sapiens
          cDNA FLJ43778 fis, clone TESTI2051279. ).
          Length = 194

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 7/75 (9%)

Query: 22 ERKYALPEAVVAIPEEPHDHNESIWSGVKTECSRDQDATSIASSTHFTVVNGYTKQCPNK 81
          E + A P     IP  PH  + S   G+   CS       +A  T   V   +T  C + 
Sbjct: 18 EPRLAQPSLGRPIPRVPHPVSVSTDQGLPDTCS------GVAMGTSGRVSVAHTAVCRHT 71

Query: 82 EN-KSCCCNHSHQIT 95
          E   +C C H H  T
Sbjct: 72 EGMHACVCAHLHVFT 86


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.129    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,552,803
Number of Sequences: 224733
Number of extensions: 735869
Number of successful extensions: 1615
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1611
Number of HSP's gapped (non-prelim): 6
length of query: 130
length of database: 73,234,838
effective HSP length: 82
effective length of query: 48
effective length of database: 54,806,732
effective search space: 2630723136
effective search space used: 2630723136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)