GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000314-TA|BGIBMGA000314-PA|IPR002345|Lipocalin,
IPR001254|Peptidase S1 and S6, chymotrypsin/Hap, IPR009003|Peptidase,
trypsin-like serine and cysteine
         (579 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         25   1.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   4.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   7.7  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 141 LSTDQYSEKNENITQLDKLNKSISSKIFHVDPRFLPDKNKKRKGVHNSTANKR--ITQAE 198
           + T +  EK     ++ K   +     ++++ + LP +  + +G HN + +KR   T  E
Sbjct: 165 MKTTRALEKTSEELKIPKAKINTGKTQYNLNSKSLPRQYSQSRGRHNQSRSKRQPKTGRE 224

Query: 199 NSTSKVFQYR 208
           + T +   YR
Sbjct: 225 DQTRRNPYYR 234


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 7/24 (29%), Positives = 17/24 (70%)

Query: 277 KHIIETNRNGFQIQESHNSVTTLN 300
           KH++  ++N  ++ + HNS+ +L+
Sbjct: 231 KHLVNLHKNLVKVAKDHNSLYSLH 254


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
          protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 14 NNTSKYKSQKVNSTEKTKQ 32
          NNT+ YKS+  N     KQ
Sbjct: 67 NNTANYKSEAQNQPSSYKQ 85


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.131    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,343
Number of Sequences: 317
Number of extensions: 5889
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 3
length of query: 579
length of database: 114,650
effective HSP length: 60
effective length of query: 519
effective length of database: 95,630
effective search space: 49631970
effective search space used: 49631970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)