GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000312-TA|BGIBMGA000312-PA|IPR002483|Splicing factor PWI
         (869 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   2.8  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   6.4  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    25   8.5  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 14/50 (28%), Positives = 23/50 (46%)

Query: 59   NMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLL 108
            + ED  V++Y+ NQ+ + F  P    +     L  +     +   WELLL
Sbjct: 1630 HQEDPPVLKYIKNQVRDVFHAPIASLVKGAAVLTEEQFVEVIPIAWELLL 1679


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 8/34 (23%), Positives = 20/34 (58%)

Query: 111 QASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 144
           Q  E  +P    QQ++++ + R ++QQ + + ++
Sbjct: 259 QQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQ 292


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 348 HVAGRGRGVAQDAGHATDAHVIAAPKTAA 376
           H  G   GVA++ G ATD   +A  + AA
Sbjct: 27  HQNGHSNGVARNGGTATDTLPVAYQQKAA 55


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.305    0.124    0.335 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,385
Number of Sequences: 2123
Number of extensions: 14601
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 4
length of query: 869
length of database: 516,269
effective HSP length: 70
effective length of query: 799
effective length of database: 367,659
effective search space: 293759541
effective search space used: 293759541
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 52 (25.0 bits)