Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000312-TA|BGIBMGA000312-PA|IPR002483|Splicing factor PWI
(869 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 161 1e-39
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 41 0.003
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 41 0.003
Z75551-4|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 41 0.003
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 38 0.040
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 36 0.12
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 36 0.16
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 34 0.50
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 33 0.66
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 32 2.0
Z81077-15|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 31 2.6
Z75952-6|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 31 2.6
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 31 2.6
Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical pr... 31 3.5
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 31 3.5
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 31 3.5
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 31 3.5
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 31 3.5
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 31 3.5
AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical ... 31 3.5
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 31 4.6
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 31 4.6
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 31 4.6
Z70309-5|CAB54290.2| 402|Caenorhabditis elegans Hypothetical pr... 30 6.1
Z70309-4|CAA94359.2| 388|Caenorhabditis elegans Hypothetical pr... 30 6.1
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 30 6.1
AF025458-6|AAB70980.1| 153|Caenorhabditis elegans Hypothetical ... 30 6.1
Z81109-7|CAB03241.1| 425|Caenorhabditis elegans Hypothetical pr... 30 8.1
AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kin... 30 8.1
AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase p... 30 8.1
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 161 bits (392), Expect = 1e-39
Identities = 70/139 (50%), Positives = 103/139 (74%)
Query: 4 YTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDD 63
+ G ++EQD RFSDKEKKL+K MKF L Q++D+++ +DV+KPWIT ++ +IL MEDD
Sbjct: 6 FRGANSEQDGRFSDKEKKLLKTMKFEPQLEQKIDLNRCNMDVIKPWITARVNDILGMEDD 65
Query: 64 VVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ 123
VV+EY+ +Q+++K PK +QIN+TGFLN + AR F+G+LW LL+ A ASE+GIP S
Sbjct: 66 VVVEYILSQIDDKNLNPKLLQINVTGFLNARRAREFVGDLWNLLIEANASEDGIPASLVN 125
Query: 124 QKKEEIKKRMEEQQNKDKD 142
QK E+K +++ D++
Sbjct: 126 QKMAEMKTNDRDEKGDDRE 144
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 44 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGEL 103
D ++PW+ +K+T+ L ED +++ +Q+ EK P+++ ++ ++ ++A F+ ++
Sbjct: 632 DRIRPWVAKKVTQFLGEEDKSFCDFICDQI-EKQATPQEILKDVAVIID-EDAEQFVIKM 689
Query: 104 WELLL-SAQASENGI 117
W LL+ QA GI
Sbjct: 690 WRLLIYEGQARRLGI 704
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 44 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGEL 103
D ++PW+ +K+T+ L ED +++ +Q+ EK P+++ ++ ++ ++A F+ ++
Sbjct: 632 DRIRPWVAKKVTQFLGEEDKSFCDFICDQI-EKQATPQEILKDVAVIID-EDAEQFVIKM 689
Query: 104 WELLL-SAQASENGI 117
W LL+ QA GI
Sbjct: 690 WRLLIYEGQARRLGI 704
>Z75551-4|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 44 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGEL 103
D ++PW+ +K+T+ L ED +++ +Q+ EK P+++ ++ ++ ++A F+ ++
Sbjct: 474 DRIRPWVAKKVTQFLGEEDKSFCDFICDQI-EKQATPQEILKDVAVIID-EDAEQFVIKM 531
Query: 104 WELLL-SAQASENGI 117
W LL+ QA GI
Sbjct: 532 WRLLIYEGQARRLGI 546
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 37.5 bits (83), Expect = 0.040
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 462 PFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHE---IDKNKKSDEVSG 518
P K++ D + DEE+E+ V + ++ SKS R S E K+KKS
Sbjct: 189 PKKSAKSKDDDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVATKKSKKSKRAET 248
Query: 519 KEQNEDE----IKT-KESKRAKR 536
E+ +DE +KT K++K++KR
Sbjct: 249 PEEEDDEEEEVVKTPKKTKKSKR 271
Score = 34.7 bits (76), Expect = 0.28
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 455 VEKPPPEPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSD 514
V K P + + ++ +DE +E++V P + SKS ++ +R E + D
Sbjct: 259 VVKTPKKTKKSKRAETPEEEDEVEEEVVKTPKKSKSSKSPKKS-----KRAETSDEEDED 313
Query: 515 EVSGKEQNEDEIKTKESKRAKRKA 538
E KE + K +++K +KR A
Sbjct: 314 EEDEKEAPKSSKKQEKAKSSKRVA 337
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 35.9 bits (79), Expect = 0.12
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 460 PEPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGK 519
PEP + ++S T EE + + P E ++ + P ++ + DK K +
Sbjct: 262 PEPSTEESSESPETS-EEPQSSESTPTSEESTEQSTEKPKKEDKKDKKDKKDKKQKKEDS 320
Query: 520 EQNEDEIKTKESKRAKRKAHQ 540
E+++D+ K+K S + K +
Sbjct: 321 EEDDDDKKSKSSSSSDSKTDE 341
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 35.5 bits (78), Expect = 0.16
Identities = 20/88 (22%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 454 AVEKPPPEPFNDGKTQSDHTDDEEKEDIVNIPNLR---EYSKSLSRTPSPFLRRHEIDKN 510
A+E+ + D + + D D+EE+ED N+P ++ + K ++ + + D++
Sbjct: 423 AIEEDSDDEDEDEEEEEDEEDEEEEEDTTNVPLIKSKADLLKQIAANRAAASAAQDSDED 482
Query: 511 K-KSDEVSGKEQNEDEIKTKESKRAKRK 537
+ + DE +E++E+E + ++ K K
Sbjct: 483 EDEEDEEDVEEEDEEEEEEEDIPAVKPK 510
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.50
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 466 GKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDE 525
G + + DDE+K+D + + SK ++ +R + D++KK D+ ++ +DE
Sbjct: 154 GDKKDEKKDDEKKDDKKEAKSKSKKSKKSKKSKKS--KREKKDEDKKDDDKKDDDKKDDE 211
Query: 526 IKTKESK 532
K E K
Sbjct: 212 KKDDEKK 218
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 465 DGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNED 524
DGK + + DDE+K++ + +E K + + + D KK D+ K +++
Sbjct: 126 DGKKEDEKKDDEKKDEEKK-DDKKEDDKKGDK------KDEKKDDEKKDDKKEAKSKSKK 178
Query: 525 EIKTKESKRAKRK 537
K+K+SK++KR+
Sbjct: 179 SKKSKKSKKSKRE 191
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 33.5 bits (73), Expect = 0.66
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 453 VAVEKPPPEPFND--GKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKN 510
V EK + D + SD+ +DEEKE + KS+S PSP E +K
Sbjct: 466 VKEEKEKEDSIKDEVAEENSDNDNDEEKEKVSE--------KSIS--PSPPSDDEEKEKE 515
Query: 511 KKSDEVSGKEQNEDEIKTKESKRAKRK 537
++ + + KE+ E + + ++ KR KR+
Sbjct: 516 REKERLIEKERRERDQRRRDKKREKRE 542
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 31.9 bits (69), Expect = 2.0
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 456 EKPPPEPFNDGKTQSDHTDD--EEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKS 513
EK + K +SD + +E++V + ++ SKS +TP + E S
Sbjct: 316 EKSSKKRSKKSKKESDEEQQASDSEEEVVEV---KKNSKSPKKTPKKTAVKEE------S 366
Query: 514 DEVSGKEQNEDEIKTKESKRAKRKAHQ 540
+E SG E+ E K K SK KRKA +
Sbjct: 367 EESSGDEEEEVVKKKKSSKINKRKAKE 393
>Z81077-15|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 459 PPEPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSG 518
P E + Q D DDEE+ + LR K TPS ++ + ++++DE G
Sbjct: 1005 PAEESSSSNMQGDEIDDEEEPRWSRV--LRSRPKREQVTPSKKSKKEKRADSEENDEYGG 1062
Query: 519 KEQNEDEIKTKES 531
+ + +++ ES
Sbjct: 1063 ENHSFSAVRSDES 1075
>Z75952-6|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 459 PPEPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSG 518
P E + Q D DDEE+ + LR K TPS ++ + ++++DE G
Sbjct: 1005 PAEESSSSNMQGDEIDDEEEPRWSRV--LRSRPKREQVTPSKKSKKEKRADSEENDEYGG 1062
Query: 519 KEQNEDEIKTKES 531
+ + +++ ES
Sbjct: 1063 ENHSFSAVRSDES 1075
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/75 (20%), Positives = 31/75 (41%)
Query: 458 PPPEPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVS 517
PPP P N+ + Q + + K + I E + L F E+D+ + +
Sbjct: 1015 PPPPPKNEVRVQEEQLEGSRKRKLEQIQEEDEDEEILDEEEELFEEEEEVDEEYEGEVEE 1074
Query: 518 GKEQNEDEIKTKESK 532
++ +E+ +E +
Sbjct: 1075 VHRESSEELDDEEEE 1089
>Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical
protein R186.7 protein.
Length = 359
Score = 31.1 bits (67), Expect = 3.5
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 94 KNARLFMGELWELLLSAQASENGIPESFTQQKKEEIKKRMEEQQNKD 140
+N RLF + L S + +E ++ Q+K+EE++K++EE + KD
Sbjct: 159 RNRRLFSNLIMGTLSSFKKTEK---KTTQQEKQEEVEKKLEETKKKD 202
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 31.1 bits (67), Expect = 3.5
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 455 VEKPPPEPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSD 514
VEKP P+P +T++ + EK+ V + + +++ + SP + E +K +
Sbjct: 140 VEKPEPKPEPITETEASPSKASEKDAAVEVSVEKVDAETAQESDSP--QEAEKEKTEPQV 197
Query: 515 EVSGKEQNEDEIKTKES 531
E+ Q EDE ES
Sbjct: 198 ELENGGQEEDEPDRDES 214
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 9/135 (6%)
Query: 410 LEKSVSIPRKENND------KLPKKPEHLPIPREQXXXXXXXXXXXXXXVAVEKPPPEPF 463
+E S + P+KE + K PK P+ + RE+ +E+
Sbjct: 57 IELSDTSPQKETSQQSPKAPKTPKTPKTPKVSREEREKQKREKMEEREKQRIER--ERIL 114
Query: 464 NDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNE 523
+ + + D +E++ D R K L +R E ++ KK DE +++E
Sbjct: 115 EEKRLEKDKLAEEKRLDKEKKEKER-LDKKLEEDKKKEEKRKEAEEKKKKDEEEKMKKDE 173
Query: 524 DEIKTKESKRAKRKA 538
+ K K+ + K++A
Sbjct: 174 ERNKRKKEEEEKKEA 188
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 31.1 bits (67), Expect = 3.5
Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 407 KERLEKSVSIPRKENNDKLPKKPEHLPIPREQXXXXXXXXXXXXXXVAVEKPPPEPFNDG 466
KE+ +KS + +K +K E +E+ +K E D
Sbjct: 72 KEKSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKE--EDK 129
Query: 467 KTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEI 526
K++ D++EK+D + +E K ++ + + E + KK D+ KE+ ++E
Sbjct: 130 KSEDKKEDEKEKDD-----DKKEDKKDDKKSDNKDDKDDEKKEEKKDDKEEKKEEKKEEK 184
Query: 527 K--TKESKRAKRKAHQ 540
K KE K+ ++K +
Sbjct: 185 KEEKKEEKKEEKKEEE 200
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 31.1 bits (67), Expect = 3.5
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 467 KTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEI-DKN---KKSDEVSG-KEQ 521
KTQ ++ ++K+D +E SK S+ ++ E+ DK KK D+ G KE+
Sbjct: 108 KTQETKSERKDKKDEKKEDEKKEESKEKSKDEEK--KKDEVKDKKEDEKKDDKKPGEKEE 165
Query: 522 NEDEIKTKESKRAKRK 537
++E+K KE+K+ ++K
Sbjct: 166 KKEEVK-KETKKEEKK 180
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 31.1 bits (67), Expect = 3.5
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 456 EKPPPEPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDE 515
EK + D + + D +DE+K+D SKS S ++ + K +K D+
Sbjct: 130 EKKDDKKEKDEEKKDDKKEDEKKDDDKKDDKKEAKSKSKKSNKS---KKSKKSKREKKDD 186
Query: 516 VSGKEQNEDEIKTKESKRAKRKAHQ 540
+++ +D+ K + K ++K ++
Sbjct: 187 KKDEDKKDDDKKDDDKKDDEKKDNE 211
Score = 31.1 bits (67), Expect = 3.5
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 456 EKPPPEPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHE--IDKNKKS 513
+K E D K + + DD++K+D + + S ++ + + D++KK
Sbjct: 135 KKEKDEEKKDDKKEDEKKDDDKKDDKKEAKSKSKKSNKSKKSKKSKREKKDDKKDEDKKD 194
Query: 514 DEVSGKEQNEDEIKTKESK 532
D+ ++ +DE K E K
Sbjct: 195 DDKKDDDKKDDEKKDNEKK 213
>AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical
protein Y18H1A.2 protein.
Length = 270
Score = 31.1 bits (67), Expect = 3.5
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 470 SDHTDD--EEKEDIVNIPNLREYSKSLSRTPS----PFLRRHEIDKNKKSDEVSGKEQNE 523
+D+T+D ++KE +P LR ++ L R + P L+R E+++ +K + +
Sbjct: 113 ADNTNDLNKKKEWYEELP-LRRAAEPLDRRKARDALPCLKRKELEEERKRKREDSDSEEK 171
Query: 524 DEIKTKESKRAKRKAHQ 540
+ + K+ K+ K+K H+
Sbjct: 172 AKKRHKKDKKKKKKKHR 188
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 456 EKPPPEPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDE 515
EK E + K + D D+++ ED + + K + + + K++K DE
Sbjct: 90 EKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKDE 149
Query: 516 VSGK-EQNEDEIKTKESKRAKRK 537
K ++++ K+K+SK++KR+
Sbjct: 150 KKEKSKKSKKSSKSKKSKKSKRE 172
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 30.7 bits (66), Expect = 4.6
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 470 SDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKK-SDEVSGKEQNEDEIKT 528
S+ +D++EK + L++ +KS S + S E+ K+KK S +V KE ++
Sbjct: 183 SEESDEDEKPSKKSKKGLKKKAKSESESESE--DEKEVKKSKKKSKKVVKKESESEDEAP 240
Query: 529 KESKRAKRK 537
++ K KRK
Sbjct: 241 EKKKTEKRK 249
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 30.7 bits (66), Expect = 4.6
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 470 SDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKNKK-SDEVSGKEQNEDEIKT 528
S+ +D++EK + L++ +KS S + S E+ K+KK S +V KE ++
Sbjct: 183 SEESDEDEKPSKKSKKGLKKKAKSESESESE--DEKEVKKSKKKSKKVVKKESESEDEAP 240
Query: 529 KESKRAKRK 537
++ K KRK
Sbjct: 241 EKKKTEKRK 249
>Z70309-5|CAB54290.2| 402|Caenorhabditis elegans Hypothetical
protein R102.5b protein.
Length = 402
Score = 30.3 bits (65), Expect = 6.1
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 471 DHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLR---RHEIDKNKKSDEVSGKEQNEDEIK 527
+ T+ + ++ + L+ ++ + S L+ HEI++NKK E +NE E+K
Sbjct: 138 ESTEIALRTSLLLVSELKSQLQAAKMSESTLLKSNSNHEIEENKKLSEKMEVMKNEFELK 197
Query: 528 TKESKRAKRKAHQ 540
+ES + K Q
Sbjct: 198 MQESAASVEKVIQ 210
>Z70309-4|CAA94359.2| 388|Caenorhabditis elegans Hypothetical
protein R102.5a protein.
Length = 388
Score = 30.3 bits (65), Expect = 6.1
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 471 DHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLR---RHEIDKNKKSDEVSGKEQNEDEIK 527
+ T+ + ++ + L+ ++ + S L+ HEI++NKK E +NE E+K
Sbjct: 138 ESTEIALRTSLLLVSELKSQLQAAKMSESTLLKSNSNHEIEENKKLSEKMEVMKNEFELK 197
Query: 528 TKESKRAKRKAHQ 540
+ES + K Q
Sbjct: 198 MQESAASVEKVIQ 210
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 30.3 bits (65), Expect = 6.1
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 463 FNDGKTQSDHTDDEEKEDIVN-IPNLREYSKSLSRTPSPFLRRHEIDK---NKKSDEVSG 518
FN T SD +D+E+K D VN I K S T ++ +DK S + G
Sbjct: 57 FNLESTMSDLSDEEDKPDSVNEIQKGVSGIKISSDTDDRSQKKTNVDKVAPPHSSTKQFG 116
Query: 519 KEQNEDEIKTKESKRAKRKA 538
QN+ K+ ++K +KRK+
Sbjct: 117 TNQNKTS-KSDQNKTSKRKS 135
>AF025458-6|AAB70980.1| 153|Caenorhabditis elegans Hypothetical
protein C01B12.8 protein.
Length = 153
Score = 30.3 bits (65), Expect = 6.1
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 10 EQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVL---KPWITQKITEILNMEDDVVI 66
EQ T +EKK + + Q +K+ DV+ K Q+I E L+ + D ++
Sbjct: 7 EQKTELIKQEKKRRRIARLRQVRQQSAANAKITRDVVNQRKQEFIQEIREELHEQVDALM 66
Query: 67 EYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQQKK 126
VT + K P K + + L K++R E+ E L N ++ K
Sbjct: 67 TEVTEK-SLKLPVSAKRKTSTPRSLK-KSSR--CREMTESDLELAKKRNADAMKHLREAK 122
Query: 127 EEIKKRMEEQQNKDKD 142
++ +K EE+ K K+
Sbjct: 123 KKKEKEQEEKLAKKKE 138
>Z81109-7|CAB03241.1| 425|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 425
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 508 DKNKKSDEVSGKEQNEDEIKTKESKRAKRKAHQ 540
+K K+ D+ KE+ +++ K KE +R KRK+ +
Sbjct: 374 EKEKEKDKEKEKEKEKEKEKDKEKEREKRKSKE 406
>AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kinase
2 protein.
Length = 632
Score = 29.9 bits (64), Expect = 8.1
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 26 MKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQI 85
++ G +T++V +L L+ W K +L++ + V N + CP +
Sbjct: 487 LQAGQQVTRKVGDDLARLPTLRVWFRTKSAIVLHLSNGTVQINFFNDHIKMVLCPLMQAV 546
Query: 86 NLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ--QKKEEIKKRMEEQQNKDKDK 143
F++ +N R+F + L +ENG PE F Q + + +R+ E+ K++ K
Sbjct: 547 T---FID-ENKRMFTYKFSHL------AENGCPEKFLHRIQYAKCMIQRLVEEHTKEETK 596
>AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase
protein 2 protein.
Length = 632
Score = 29.9 bits (64), Expect = 8.1
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 26 MKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQI 85
++ G +T++V +L L+ W K +L++ + V N + CP +
Sbjct: 487 LQAGQQVTRKVGDDLARLPTLRVWFRTKSAIVLHLSNGTVQINFFNDHIKMVLCPLMQAV 546
Query: 86 NLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ--QKKEEIKKRMEEQQNKDKDK 143
F++ +N R+F + L +ENG PE F Q + + +R+ E+ K++ K
Sbjct: 547 T---FID-ENKRMFTYKFSHL------AENGCPEKFLHRIQYAKCMIQRLVEEHTKEETK 596
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.305 0.124 0.335
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,811,479
Number of Sequences: 27539
Number of extensions: 468103
Number of successful extensions: 2248
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 2149
Number of HSP's gapped (non-prelim): 144
length of query: 869
length of database: 12,573,161
effective HSP length: 88
effective length of query: 781
effective length of database: 10,149,729
effective search space: 7926938349
effective search space used: 7926938349
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 64 (29.9 bits)
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