Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000311-TA|BGIBMGA000311-PA|IPR000488|Death,
IPR011029|DEATH-like
(221 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 0.31
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual 29 0.41
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 28 1.3
SPAC23G3.11 |rpn6||19S proteasome regulatory subunit Rpn6|Schizo... 28 1.3
SPBC6B1.08c |ofd1||2-oxoglutarate and Fe|Schizosaccharomyces pom... 28 1.3
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 27 1.7
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 27 1.7
SPAC1B1.04c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 2.2
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 27 2.2
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 27 2.2
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 27 2.2
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 27 2.2
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 27 2.9
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 27 2.9
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 2.9
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 2.9
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 27 2.9
SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces pom... 26 3.8
SPAC31A2.10 |||RanGTP-binding protein |Schizosaccharomyces pombe... 25 6.7
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 25 8.8
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 25 8.8
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch... 25 8.8
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 25 8.8
SPCC777.13 |vps35||retromer complex subunit Vps35|Schizosaccharo... 25 8.8
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 29.9 bits (64), Expect = 0.31
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Query: 39 NSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNE-LLRKITDYE----L 93
N K++YE ++ L + ++DV + + + L + R L N+E LLR+ Y+ L
Sbjct: 1169 NYKKKYEGLQ-----LDLEGLKDV--DTNFQELSKKHRDLTFNHESLLRQSASYKEKLSL 1221
Query: 94 ISVSKKDLNNTVSSFTATHDE 114
S KDL+N VSS T +E
Sbjct: 1222 ASSENKDLSNKVSSLTKQVNE 1242
>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 533
Score = 29.5 bits (63), Expect = 0.41
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 55 KVLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDYELISVSKKD 100
K L++ + S+N + P VAR +Q + L K D++L+ V D
Sbjct: 311 KTLKVGIMRSDNVVNPQPPVARAMQMAIDQLSKNPDFDLVDVEPLD 356
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.9 bits (59), Expect = 1.3
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 13 IILRASGTPRHGEILRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLK 72
II G P H E L KQSI R E + L +LE++D E E L
Sbjct: 218 IISEQEGIPGHSEQLLDYN---KQSIQLGLRPLSEEVVTTLKNLLEVKDKDVEGRNEALN 274
Query: 73 EVARRLQDNNELL 85
++ ++ ELL
Sbjct: 275 KILHPAKNLVELL 287
>SPAC23G3.11 |rpn6||19S proteasome regulatory subunit
Rpn6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 27.9 bits (59), Expect = 1.3
Identities = 23/128 (17%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 63 LSENSIEPLKEVARRLQDNNELLRK--ITDYELISVSKKDLNNTVSSFTAT--HDEKIES 118
L+ N+++ ++ + + E+L K D ++ + ++ L N + H++ +
Sbjct: 9 LANNAVKS-NDIEKAIDLYKEVLNKGVSKDEKVANEQEQALTNLSDLYVRENRHNDLAQL 67
Query: 119 VIKLNPFGGNLSPRKKERLFETIIEETGTNWRALARKLKI-RECVIIKIDAEETTLADKV 177
V + P N S K ++ T+I++ ++L ++++ +C+ I + T L +
Sbjct: 68 VQQSRPLMANFSKAKSAKIVRTLIDKFSGEKKSLPLQIEVANDCIKWAIKEKRTFLRQAL 127
Query: 178 K-KILEIY 184
+ K++ +Y
Sbjct: 128 ETKLISLY 135
>SPBC6B1.08c |ofd1||2-oxoglutarate and Fe|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 515
Score = 27.9 bits (59), Expect = 1.3
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 26 ILRSVKEIYKQSINSKRRYEQIETIAQL--LKVLEIRDVLSENSIEPLKEVARRL--QDN 81
+LR+V++ ++I+ + I + Q L L+ D +N ++ L++V L ++
Sbjct: 49 LLRNVRKELMENIHFTEKVTDIYRVWQTGDLANLDGLDKKEQNMLKYLRQVRDALYSEEF 108
Query: 82 NELLRKITDYELISVSKKDLNNTVSS 107
++KIT +S SKKDL+ V S
Sbjct: 109 RSHVQKITGCGPLSASKKDLSVNVYS 134
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 27.5 bits (58), Expect = 1.7
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 29 SVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKI 88
S+++ K + N+ +R + AQ+ + L + I+ KE ARRL + LL++
Sbjct: 837 SIEQRAKMAKNTTKRQLERAIQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEK 896
Query: 89 TDYE-LISVSKKDLNNTVSSFTATHDEKIESVIKLNPFGGNLSPRKKER 136
+ E + ++ + V + + + E + L+ S +KK++
Sbjct: 897 QERERQLQEERQKMQEEVLEWRKSQQKASEDDMSLSDDEEKQSGKKKKK 945
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 27.5 bits (58), Expect = 1.7
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 50 IAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDYELISVSKKDLNNTVSSFT 109
IAQ + VL+ D+ EN P +E+ R +++ LL I +L + ++ ++++ S +
Sbjct: 3 IAQEVAVLQYLDIQQENPNAPNEELFNRTAESSLLLEPIEQDQLKDLVEEWMHDSNKSDS 62
Query: 110 ATHDEKIESVIKLNPFGGNLSPRKKERLFETIIEE 144
++ N NL R + + + + EE
Sbjct: 63 KLLSNQVSQ--NDNDARKNLRKRLRNDVLKDLAEE 95
>SPAC1B1.04c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 604
Score = 27.1 bits (57), Expect = 2.2
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 57 LEIRDVLSENSIEPLKEVARR-LQDNNELLRKI-TDYELISVSKKDLNNTVSSFTATHDE 114
L I DV+ E S EPL + R +D +L + TD E +++S + T + D
Sbjct: 380 LGIMDVIQEESTEPLTSLQRNDCRDVGLILLALATDTENVTLSTAKAHLTRLKTIVSTDA 439
Query: 115 KIESVIKLNPFGGNLSPRKKERLFETIIEETGTNWRALARKLKIRECVIIKIDAEETTLA 174
+ +I++ F L + + L T++ N+ E V++ D ET LA
Sbjct: 440 SLVELIEVLIFNEEL---RIQTLLPTMLSYMVNNY----------ESVLLMEDVYETYLA 486
Query: 175 DKVK 178
++V+
Sbjct: 487 EQVE 490
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 120 IKLNPFGGNLSPRKKERLFETIIEETGTNW 149
+K+ P G+L P +++R+FE E+T + +
Sbjct: 321 LKVYPLYGSLPPNQQQRIFEPTPEDTKSGY 350
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 27.1 bits (57), Expect = 2.2
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 125 FGGNLSPRKKERLFETIIEETGTNWRALARKLKIRECVIIKIDAEETTLADKVKKILEIY 184
FG P K + + W+ L LK++ V +D+ + +KKI++
Sbjct: 27 FGALFKPVYKGKKLADPVPTIEDKWQLLPAFLKVKGLVKQHLDSYNYFVDVDLKKIVQAN 86
Query: 185 EQ-RADPQRWFFV 196
E+ +D + WF++
Sbjct: 87 EKVTSDVEPWFYL 99
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 122 LNPFGGNLSPRKKERLFETIIEETGTNWRALARKL 156
L+P N + + T++E+ GT W ++A KL
Sbjct: 322 LDPKDRNAWEESELKKLYTLVEQEGTRWNSIANKL 356
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 27.1 bits (57), Expect = 2.2
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 48 ETIAQLLKVLEIRDVLS-ENSIEPLKEVAR-RLQDNNELLRKITDYELISVSKKDLNNTV 105
+ ++ L K +EI S + E LK+ + +Q +LL E ++S +++ +
Sbjct: 86 DVLSNLAKRVEIWGANSAKTGFELLKQASPGNMQMLEDLLVSENYQESTAISDSSVSSVL 145
Query: 106 SSFTAT--HDEKIESVIKLNPFGGNLSPRKKERLFETIIEETGTNWRALARKLKIRECVI 163
+ T D++I V ++P KK + E + + TN+ AL ++ +EC+I
Sbjct: 146 LAVTTRVKQDQRIIGVAFIDPI------LKKLGVSEFVDSDAYTNFEALIVQVGAKECII 199
Query: 164 IKIDAEET 171
+ E T
Sbjct: 200 SQSGHEST 207
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 2.9
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 40 SKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVAR-RLQ 79
SKR E++E +L +E R+ +IE L+E+A+ RLQ
Sbjct: 186 SKREMERLERDQELRNKIEERNKKELETIEKLRELAKARLQ 226
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 26.6 bits (56), Expect = 2.9
Identities = 15/74 (20%), Positives = 33/74 (44%)
Query: 17 ASGTPRHGEILRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVAR 76
++GT G + + + + ++RR + +L + ++ +L ENS++ +
Sbjct: 461 SAGTSDFGLVEETTESASAYFLEARRRRNAVRKDPKLSRQPQVGRLLEENSVDDIPLATM 520
Query: 77 RLQDNNELLRKITD 90
+D E L K D
Sbjct: 521 LNEDPREALLKYAD 534
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.6 bits (56), Expect = 2.9
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 25 EILRSVKEIYKQSINSK--RRYEQIETI-AQLLKVLEIRDVLSENSIEPLKEVARRLQD- 80
E++ E +K + S+ R E+I ++ ++LL + + +VL E KE+A++L+D
Sbjct: 981 EMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRVEVLKEEKESSSKELAKQLEDA 1040
Query: 81 ---NNELLRKITDYELISVSKKDLNNTVSSFTATHDEKIESVIK 121
+ L DYE I + D + ++S EK S++K
Sbjct: 1041 VREKDSALSFKKDYEKI---RSDADRVITSL-KEDIEKERSLMK 1080
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.6 bits (56), Expect = 2.9
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 32 EIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDY 91
E+ K S + KR +ET+ Q K ++ NS + + + L+D++ ++ +
Sbjct: 753 ELTKSSEDVKRLTANVETLTQDSKAMKQSFTSLVNSYQSISNLYHELRDDHVNMQSQNNT 812
Query: 92 ELISVSKKDLNNTVSSFTATHDEKIESVIKL 122
L S SK L + T + I++V KL
Sbjct: 813 LLESESK--LKTDCENLTQQNMTLIDNVQKL 841
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 106 SSFTATHDEKIESVIKLNPFGGNLSPRKKERLFETIIEETGTNW 149
+S + DE+ + + K+N G +P KK +F G W
Sbjct: 113 NSTVPSKDEQAQDISKINTNGTLQTPNKKVNVFRLFTLARGQGW 156
>SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 48 ETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDYELISVSKKDL 101
E +A LL LE R+ ++ S EPL+ + +N L++ +++KD+
Sbjct: 26 EAVADLLSFLEDRNEVNFYSEEPLRALTILAYSDNLDLQRSAALAFAEITEKDV 79
>SPAC31A2.10 |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 460
Score = 25.4 bits (53), Expect = 6.7
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 41 KRRYEQ-IETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDYELISVSKK 99
K R EQ I+ I + ++++ +S++ L + RL+D+ + + DYE KK
Sbjct: 56 KSRLEQKIQAITPAVDLIQLVAARGNSSLQNLVPLIIRLRDHIDDFLEFIDYEASGSEKK 115
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 160 ECVIIKIDAEETTLADK--VKKILEIYEQRADPQRWFFVLCDAL 201
EC + +D + L K V+ + + +R+ P R+ +V C+ +
Sbjct: 641 ECTLAALDEDLQLLTKKTTVRSVSVVETERSSPPRFRYVNCEVI 684
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 128 NLSPRKKERLFETIIEETGTNWRALARKLKIRECV 162
NL+P + + + +I G N R LAR + + E V
Sbjct: 29 NLAPAVVDNVKDDLIVSKGGNSRELARNVPVNEMV 63
>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 8.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 68 IEPLKEVARRLQDNNELLRKITDYELISVSKKDLNNTVSSFTATHDEKIESVIK 121
+ ++ V ++L+ N E LRK+ Y K+L + + S + T E V K
Sbjct: 666 LNEMRNVTQKLKQNPEFLRKMEVYNNQFSKNKELCSNLLSSSLTAKAISEGVSK 719
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.0 bits (52), Expect = 8.8
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 110 ATHDEKIESVIKLNPFGGNLSPRKKER-LFET 140
A+ D + ++I N F GNL P ER L++T
Sbjct: 87 ASQDRGVNTLIGANLFVGNLDPLVDERVLYDT 118
>SPCC777.13 |vps35||retromer complex subunit
Vps35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 70 PLKEVARRLQDNNELLRKITDYELISVSKKDLN 102
P+KE ++R Q+ NE L+ + L+ +S+ +L+
Sbjct: 152 PIKEFSKRTQERNE-LKVLVGLNLVRLSQLNLD 183
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.134 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 963,979
Number of Sequences: 5004
Number of extensions: 39707
Number of successful extensions: 181
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 168
Number of HSP's gapped (non-prelim): 28
length of query: 221
length of database: 2,362,478
effective HSP length: 70
effective length of query: 151
effective length of database: 2,012,198
effective search space: 303841898
effective search space used: 303841898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)
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