Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000311-TA|BGIBMGA000311-PA|IPR000488|Death,
IPR011029|DEATH-like
(221 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g24010.1 68418.m02821 protein kinase family protein contains ... 33 0.20
At5g16715.1 68418.m01957 tRNA synthetase class I (I, L, M and V)... 32 0.35
At5g60070.1 68418.m07532 ankyrin repeat family protein contains ... 31 0.47
At5g28400.1 68418.m03448 expressed protein 31 0.62
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 31 0.62
At1g64790.1 68414.m07346 translational activator family protein ... 31 0.82
At4g30600.1 68417.m04341 signal recognition particle receptor al... 30 1.1
At5g27550.1 68418.m03299 kinesin motor protein-related kinesin-l... 30 1.4
At5g60830.1 68418.m07631 bZIP transcription factor family protei... 29 1.9
At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7) ident... 29 1.9
At4g26020.1 68417.m03747 expressed protein weak similarity to ca... 29 1.9
At3g46960.1 68416.m05099 DEAD/DEAH box helicase, putative simila... 29 1.9
At3g22790.1 68416.m02873 kinase interacting family protein simil... 29 1.9
At2g46180.1 68415.m05742 intracellular protein transport protein... 29 1.9
At1g13020.1 68414.m01510 eukaryotic translation initiation facto... 29 1.9
At5g66200.1 68418.m08339 armadillo/beta-catenin repeat family pr... 29 2.5
At5g41810.2 68418.m05091 expressed protein 29 2.5
At5g41810.1 68418.m05090 expressed protein 29 2.5
At4g09960.2 68417.m01630 MADS-box protein (AGL11) 29 2.5
At3g58380.1 68416.m06507 meprin and TRAF homology domain-contain... 29 2.5
At1g73150.1 68414.m08460 DNA-binding bromodomain-containing prot... 29 2.5
At5g28320.1 68418.m03438 expressed protein This is likely a pseu... 29 3.3
At3g26400.1 68416.m03292 eukaryotic translation initiation facto... 29 3.3
At5g65790.1 68418.m08278 myb family transcription factor (MYB68)... 28 4.4
At5g19970.1 68418.m02377 expressed protein ; expression support... 28 4.4
At5g15560.1 68418.m01822 hypothetical protein 28 4.4
At4g36080.1 68417.m05136 FAT domain-containing protein / phospha... 28 4.4
At4g27980.1 68417.m04014 expressed protein 28 4.4
At3g61780.1 68416.m06931 expressed protein ; expression supporte... 28 5.8
At3g49690.1 68416.m05433 myb family transcription factor contain... 28 5.8
At2g36890.1 68415.m04524 myb family transcription factor (MYB38)... 28 5.8
At1g54385.1 68414.m06201 expressed protein ; expression supporte... 28 5.8
At1g05560.1 68414.m00573 UDP-glucose transferase (UGT75B2) simil... 28 5.8
At5g59980.1 68418.m07522 RNase P subunit p30 family protein cont... 27 7.6
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 27 7.6
At4g31390.1 68417.m04452 ABC1 family protein contains Pfam domai... 27 7.6
At4g09960.1 68417.m01629 MADS-box protein (AGL11) 27 7.6
At3g18170.1 68416.m02312 expressed protein contains Pfam domain,... 27 7.6
At2g37420.1 68415.m04589 kinesin motor protein-related 27 7.6
At1g74770.1 68414.m08663 expressed protein 27 7.6
At1g31814.1 68414.m03906 expressed protein 27 7.6
>At5g24010.1 68418.m02821 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 824
Score = 32.7 bits (71), Expect = 0.20
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 27 LRSVKEIYKQSINSKRRYEQIETIAQLLK--VLEIRDVLSENSIEPLKEVARRLQDNNEL 84
LRS K ++ IN T + ++K +L+I D + E S P K + E+
Sbjct: 121 LRSAK--FRVLINGFSVINSFSTSSVVVKEFILKIDDPVLEISFLPFKASGFGFVNAVEV 178
Query: 85 LRKITDYELISVSKKDLNNTVSSFTATHDEKIESVIKLNPFGGNLSPRKKERLFET-IIE 143
DY + +K + N+ F+ + +E+V ++N G L+P + L+ T +++
Sbjct: 179 FSAPKDYIMDQGTKLVIPNSAQIFSNLSSQVLETVHRINVGGSKLTP-FNDTLWRTWVVD 237
Query: 144 ETGTNWRALARK 155
+ RA AR+
Sbjct: 238 DNYLLLRAAARR 249
>At5g16715.1 68418.m01957 tRNA synthetase class I (I, L, M and V)
family protein similar to SP|P11931 Valyl-tRNA
synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (VALRS)
{Bacillus stearothermophilus}; contains Pfam profile
PF00133: tRNA synthetases class I (I, L, M and V)
Length = 970
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/70 (25%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 36 QSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKIT-DYELI 94
+++ S +R+E ++ + + IR+ +E S+EP+K ++ + + E++ I+ + E++
Sbjct: 799 RNVESIKRFENLQALTRA-----IRNARAEYSVEPVKRISASVVGSAEVIEYISKEKEVL 853
Query: 95 S-VSKKDLNN 103
+ +S+ DLNN
Sbjct: 854 ALLSRLDLNN 863
>At5g60070.1 68418.m07532 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 548
Score = 31.5 bits (68), Expect = 0.47
Identities = 35/177 (19%), Positives = 71/177 (40%), Gaps = 12/177 (6%)
Query: 3 KSEYSLLKDEIILRASGTPRHGEILRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRD- 61
+ ++S +K+ + ++LR + + ++ Y + +A+L+K ++ D
Sbjct: 42 RGDFSAVKEILSNHMESEDELRDLLRKQNQCGETALYVAAEYGDADVVAELIKYYDLEDA 101
Query: 62 -VLSENSIEPLKEVARRLQDNNELLRKITDYELISVSKKDLNNTVSSFTATHDEKIESV- 119
+ N +P A+ Q ++LR + + DL+NT + TA +E V
Sbjct: 102 ETKARNGFDPFHIAAK--QGELDVLRVLMEEHPELSMTVDLSNTTALHTAAAQGHVEVVE 159
Query: 120 IKLNPFGGNLSPRKKERLFETIIEETGTNWRALARKLKIRECVIIKIDAEETTLADK 176
L G +L+ K +T + N A K I+ ++ + T DK
Sbjct: 160 YLLEAAGSSLAAIAKSN-GKTALHSAARNGHAEVVK------AIVAVEPDTATRTDK 209
>At5g28400.1 68418.m03448 expressed protein
Length = 996
Score = 31.1 bits (67), Expect = 0.62
Identities = 32/139 (23%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 10 KDEIILRASGTPRHGEILRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIE 69
KD++ + + T R ++RSVKE K+ ++ RR + E +L ++ + D + +
Sbjct: 455 KDQLSMMKNSTGRKSRVIRSVKEA-KEFLS--RRSGEKELTQELSQMAQDSDEIFPKQSD 511
Query: 70 PLKEVARRLQDNNELLRKITDYELISVSKKDLNNTVSSFTATHDEKIESVIKLNPFGGNL 129
+ VAR+ + + + + DY+ +S + N V ++ E+++S K + G
Sbjct: 512 EERGVARKHKLDVDSQPQKNDYQKLS----ETGNAVKGSSSNKREELKSA-KSSSGGTEH 566
Query: 130 SPRKKERLFETIIEETGTN 148
+++ E IE+T N
Sbjct: 567 IEKEEPSGKENWIEKTTMN 585
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 31.1 bits (67), Expect = 0.62
Identities = 37/192 (19%), Positives = 78/192 (40%), Gaps = 5/192 (2%)
Query: 22 RHGEILRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDN 81
R L+ ++E+ K++ N ++ IA+ K L R+V I+ L L DN
Sbjct: 763 REASHLKKIEELSKENENLVDNVANMQNIAEESKDLREREVAYLKKIDELSTANGTLADN 822
Query: 82 NELLRKIT-DYELISVSKKDLNNTVSSFTATHDEKIESVIKLNP-FGGNLSPRKKERLFE 139
L+ I+ + + + + L + ++ ++ KL N R++E +
Sbjct: 823 VTNLQNISEENKELRERETTLLKKAEELSELNESLVDKASKLQTVVQENEELRERETAYL 882
Query: 140 TIIEETGTNWRALA---RKLKIRECVIIKIDAEETTLADKVKKILEIYEQRADPQRWFFV 196
IEE L+ KL+I ++ ET K++++ ++ E + +
Sbjct: 883 KKIEELSKLHEILSDQETKLQISNHEKEELKERETAYLKKIEELSKVQEDLLNKENELHG 942
Query: 197 LCDALEESYRRD 208
+ +E+ +D
Sbjct: 943 MVVEIEDLRSKD 954
>At1g64790.1 68414.m07346 translational activator family protein
similar to HsGCN1 [Homo sapiens] GI:2282576
Length = 2440
Score = 30.7 bits (66), Expect = 0.82
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 134 KERLFETIIE-ETGTNWRALARKLKIRECVIIKIDAEETTLADKVKKILEIYEQRADPQR 192
KE+L+ I + E LA KL +CV+ +D E L + ++LE + ++ Q
Sbjct: 389 KEKLWTLISQNEPSLVQITLASKLSSDDCVVC-VDLLEVLLVEHSSRVLEAFSLKSLSQL 447
Query: 193 WFFVLC 198
F+LC
Sbjct: 448 LLFLLC 453
>At4g30600.1 68417.m04341 signal recognition particle receptor alpha
subunit family protein similar to Signal recognition
particle receptor alpha subunit (SR-alpha) (Docking
protein alpha) (DP-alpha) (SP:P08240) [Homo sapiens};
similar to Signal recognition particle receptor alpha
subunit (SR-alpha) (Docking protein alpha) (DP-alpha)
(SP:P06625) [Canis familiaris}; contains Pfam PF04086:
Signal recognition particle, alpha subunit, N-terminal;
contains Pfam PF00448: SRP54-type protein, GTPase domain
Length = 634
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 59 IRDVLSENSIEPLKEVARRLQDNNELLRKITDYELISVSKKDLNNTVSSFTATHDEKIES 118
I++ S L + A R+QDN L+R ++ +LI++++ DL V +D ++
Sbjct: 503 IQEATRNGSDVVLVDTAGRMQDNEPLMRALS--KLINLNQPDLVLFVGEALVGND-AVDQ 559
Query: 119 VIKLNPFGGNLSPRKKERLFETII 142
+ K N +LS RL + I+
Sbjct: 560 LSKFNQKLSDLSTSGNPRLIDGIL 583
>At5g27550.1 68418.m03299 kinesin motor protein-related kinesin-like
heavy chain - Arabidopsis thaliana, EMBL:AF080249
Length = 425
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 19 GTPRH-GEILRSVKEIYKQSINSKRRYEQIETIAQLLKVL--EIRDVLSENSIEPLKEV 74
GTP + G R+++E+++ S SK + E +L+V +IRD+L +NS +P K++
Sbjct: 134 GTPENRGVNYRTLEELFRCS-ESKSHLMKFELSVSMLEVYNEKIRDLLVDNSNQPPKKL 191
>At5g60830.1 68418.m07631 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 206
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 42 RRYEQIETIAQLLK-VLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDYELI 94
R+ +QIE + Q ++ ++ + LSE I L+ + LQ+N++L K++ + L+
Sbjct: 89 RKKKQIEELQQQVEQLMMLNHHLSEKVINLLESNHQILQENSQLKEKVSSFHLL 142
>At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7) identical
to COP1-Interacting Protein 7 (CIP7) GI:3327868 from
[Arabidopsis thaliana]
Length = 1058
Score = 29.5 bits (63), Expect = 1.9
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 6/119 (5%)
Query: 30 VKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELL-RKI 88
+KE + +S +Q++ + + V + +D+ +S+ P +E AR NE++ K+
Sbjct: 890 IKETVVEDSHSYLSEKQVDALPAVASVDDFKDIKELHSL-PSEETARVKNRPNEIIAEKV 948
Query: 89 TDYELISVSKKDLNNTVS---SFTATHDEKIESVIKLNPFGGNLSPRKKERLFETIIEE 144
D I + N +VS T H + ++ + +SP+K ET +EE
Sbjct: 949 QDQTKIDDQETVKNTSVSEDKQITTKHYSEDVGEVQASQ-EKPVSPKKSVTFSETNMEE 1006
>At4g26020.1 68417.m03747 expressed protein weak similarity to
cardiac muscle factor 1 [Gallus gallus] GI:14422164
Length = 247
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 30 VKEIYKQSINSKRRYEQIETIAQLLKVLEI-RDVLSENSIEPLKEVARRLQDNNELLRK 87
+++ K I++K + Q E + + E RD S +E LK+ +L+ NE+L++
Sbjct: 184 MEQAEKNDISNKLQSLQKELLISRTSIAEKQRDTTSNRQVETLKQKLMKLRKENEILKR 242
>At3g46960.1 68416.m05099 DEAD/DEAH box helicase, putative similar to
SP|P35207 Antiviral protein SKI2 {Saccharomyces
cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 1347
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 106 SSFTATHDEKIESVIKLNPFGGNLSPRKKERLFETIIEETGTNWRALARKLKIREC-VII 164
++F+ T + ++ N F L P K +L + + ET W L +K+ + +C +
Sbjct: 1056 AAFSQTVQQLLDLKSDGNKFPPALDPVKDLKLKDAELVETYYKWTNLLQKMSMNKCHGCV 1115
Query: 165 KIDAEETTLADKVKK 179
K++ E LA ++KK
Sbjct: 1116 KLE-EHMKLAREIKK 1129
>At3g22790.1 68416.m02873 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 36 QSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRK--ITDYEL 93
Q+INS + +++ET+ ++LK E+ + +E L+E + N+LL + E
Sbjct: 1103 QNINSGLK-QKVETLEEILKGKEVDSQELNSKLEKLQESLEEANELNDLLEHQILVKEET 1161
Query: 94 ISVSKKDLNNTVSSFTATHDEKIE 117
+ +L ATH+ E
Sbjct: 1162 LRQKAIELLEAEEMLKATHNANAE 1185
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 29.5 bits (63), Expect = 1.9
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 67 SIEPLKEVARRLQ-DNNELLRKITDYEL-ISVSKKDLNNTV-SSFTATHDEKIESVI--K 121
S E LKEV + L+ +NNEL K ++ E + S+K + + T + S+ K
Sbjct: 280 SRENLKEVNKALEKENNELKLKRSELEAALEASQKSTSRKLFPKSTEDLSRHLSSLDEEK 339
Query: 122 LNPFGGNLSPRKKERLFETIIEETGTNWRALARKLKIRECVIIKIDAEETTLADKVKKIL 181
F G K + E +EE ++LK + +++ + EE+ D+ +++
Sbjct: 340 AGTFPGKEDMEKSLQRLEKELEEARREKDKARQELKRLKQHLLEKETEESEKMDEDSRLI 399
Query: 182 EIYEQRADPQRWFFVLCDALEESYRRDIAD 211
+ Q + QR + LE++ R+ +A+
Sbjct: 400 DELRQTNEYQRSQIL---GLEKALRQTMAN 426
>At1g13020.1 68414.m01510 eukaryotic translation initiation factor,
putative (EIF4B5) eukaryotic initiation factor 4B
(GI:6739522) {Arabidopsis thaliana}; EST gb|T22808 comes
from this gene
Length = 549
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 97 SKKDLNNTVSSFTATHDEKIESVIKLNPFGGNLSPRKKERLFETIIEETGTNWRALARKL 156
S N + SS + ++ K+NPFG + PR E ++EE G +WR + +L
Sbjct: 338 SSAQSNRSESSALNNVENVVKPRPKVNPFG-DAKPR------EVLLEEQGKDWRKIDSEL 390
Query: 157 KIRECVIIKIDAE-ETTLADKVKKILEIYEQRA 188
+ R + + + E E L ++++++ + E+ A
Sbjct: 391 EHRR--VDRPETEGERMLKEEIEELRKKLEKEA 421
>At5g66200.1 68418.m08339 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 651
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 43 RYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDYELISVSKKDLN 102
RY + ++ V E L ++ +P + + D + +I D EL+ + +
Sbjct: 448 RYNSAMALMEITAVAEQDADLRRSAFKPNSPACKAVVDQVLRIIEIADSELLIPCIRTIG 507
Query: 103 NTVSSFTATHDEKIESVIKL 122
N +F AT I ++KL
Sbjct: 508 NLARTFRATETRMIGPLVKL 527
>At5g41810.2 68418.m05091 expressed protein
Length = 279
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 157 KIRECVIIKIDAEETTLADKVKKILEIYEQRADPQR 192
K++ECV+I+ EE T + KIL+ Q D R
Sbjct: 25 KMKECVVIQKADEEVTKGQETMKILDGSRQNQDETR 60
>At5g41810.1 68418.m05090 expressed protein
Length = 288
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 157 KIRECVIIKIDAEETTLADKVKKILEIYEQRADPQR 192
K++ECV+I+ EE T + KIL+ Q D R
Sbjct: 25 KMKECVVIQKADEEVTKGQETMKILDGSRQNQDETR 60
>At4g09960.2 68417.m01630 MADS-box protein (AGL11)
Length = 216
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 27 LRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLR 86
++ + Y Q ++K R +QI+TI + L + D LS S++ LK+V RL+ +R
Sbjct: 82 VQEINAAYYQQESAKLR-QQIQTIQNSNRNL-MGDSLSSLSVKELKQVENRLEKAISRIR 139
Query: 87 KITDYEL 93
+ EL
Sbjct: 140 SKKEIEL 146
>At3g58380.1 68416.m06507 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains weak hit to Pfam PF00917: MATH
domain
Length = 307
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 27 LRSVKEIYKQSINSKRRYEQIETIAQLL--KVLEIRDVLSENSIEPL 71
L+ VKE K N K R +QIE Q L K L+++D+L + L
Sbjct: 246 LKEVKEKKKNVDNGKARLQQIEEDLQKLNQKRLDLKDILDKEKANDL 292
>At1g73150.1 68414.m08460 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 461
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 78 LQDNNELLRKITDYELISVSKKDLNNTVSSFTATHDEKIESVIKLNPFGGNLSPRKKERL 137
L+DN+++++ L S+SK ++ N A +E + +L P G N +P ++L
Sbjct: 41 LEDNHQMMK----ISLSSISKLEVRNLKRKLQAELEEVRSLIKRLEPQGNNFAPVPNKKL 96
>At5g28320.1 68418.m03438 expressed protein This is likely a
pseudogene.
Length = 967
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 10 KDEIILRASGTPRHGEILRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIE 69
KD++ + + T R ++RSVKE K+ ++ RR + E +L ++ + D + +
Sbjct: 444 KDQLSMMKNSTGRKSRVIRSVKEA-KEFLS--RRSGEKELTQELSQMAQDSDEIFPKQSD 500
Query: 70 PLKEVARRLQDNNELLRKITDYELIS 95
+ VAR+ + + + + DY+ +S
Sbjct: 501 EERGVARKHKLDVDSQPQKNDYQKLS 526
>At3g26400.1 68416.m03292 eukaryotic translation initiation factor
4B, putative/ eIF-4B, putative similar to eukaryotic
initiation factor 4B [Arabidopsis thaliana] GI:6739518
Length = 532
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 12/71 (16%)
Query: 121 KLNPFGGNLSPRKKERLFETIIEETGTNWRALARKLKIRECVIIKIDAEETTLADKVKKI 180
K+NPFG + PR E ++EE G +WR + +L+ R ++D ET +K+
Sbjct: 348 KVNPFG-DAKPR------EVLLEEQGKDWRKMDLELEHR-----RVDRPETEEEKMLKEE 395
Query: 181 LEIYEQRADPQ 191
+E ++ + +
Sbjct: 396 IEELRKKLEKE 406
>At5g65790.1 68418.m08278 myb family transcription factor (MYB68)
identical to putative transcription factor (MYB68)
GI:3941493 from [Arabidopsis thaliana]; contains Pfam
profile: PF00249 myb-like DNA-binding domain
Length = 374
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 121 KLNPFGGNLSPRKKERLFETIIEE-TGTNWRALARKLKIREC 161
K N G SP + +L + I TG NW AL +K+ +R C
Sbjct: 9 KANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRC 50
>At5g19970.1 68418.m02377 expressed protein ; expression supported
by MPSS
Length = 363
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 162 VIIKIDAEETTLADKVKKILEIYEQRADPQRWFFV 196
V+I++D + + +KV K LE++E ++ ++W V
Sbjct: 247 VVIRLDRIDNSKMNKVMKSLEVWEISSNGEKWELV 281
>At5g15560.1 68418.m01822 hypothetical protein
Length = 239
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 39 NSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDYELISVSK 98
N +R + I + +K +S N K+ A D++++ I D I
Sbjct: 53 NKTKREDDESNIEEFIKFNSKEQDIS-NVTSKQKDKATTEDDDDDVKEIIQDDISICCRS 111
Query: 99 KDLNNTVSSFT--ATHDEKIESV 119
+ NN++SSFT H+E+ ESV
Sbjct: 112 EASNNSISSFTFPILHNEEDESV 134
>At4g36080.1 68417.m05136 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF00454: Phosphatidylinositol 3-
and 4-kinase, PF02259: FAT domain, PF02260: FATC domain
Length = 3839
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 17 ASGTPRHGEILRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVAR 76
A +H +R K+ +++ ++ + + T+A L K L+ + ++++E V
Sbjct: 3368 ADAVTKHVAFVREYKQDFERDLDPESNSFPV-TLADLTKKLKDWKNILQSNVEDRFPVLL 3426
Query: 77 RLQDNNELLR--KITDYEL 93
RL+D +++LR + D E+
Sbjct: 3427 RLEDESKVLRDFNVVDVEI 3445
>At4g27980.1 68417.m04014 expressed protein
Length = 565
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 25 EILRSVKEIY-KQSINSKRRYEQIETIAQLLKVLE--IRDVLSE-----NSIE-PLKEVA 75
E+ ++ KE + KQ ++RR E+ E + L+ LE +++ +E ++E +KE A
Sbjct: 153 ELEKAEKEFHLKQRAETERRNEESEAREKDLRALEEAVKEKTAELKRKEETLELKMKEEA 212
Query: 76 RRLQDNNELLRK 87
+L++ EL+RK
Sbjct: 213 EKLREETELMRK 224
>At3g61780.1 68416.m06931 expressed protein ; expression supported
by MPSS
Length = 1121
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 10 KDEIILRASGTPRHGEILRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIE 69
KD++ + + T R ++RSVKE K+ ++ + +++ + + ++ S+ S E
Sbjct: 471 KDQLSMMKNSTGRKSRVIRSVKEA-KEFLSRRSGEKELTQEPSQMIAQDSVEIFSKQSDE 529
Query: 70 PLKEVARR--LQDNNELL 85
+ VAR+ L D N++L
Sbjct: 530 E-RGVARKHELVDKNKIL 546
>At3g49690.1 68416.m05433 myb family transcription factor contains
PFAM profile: myb DNA binding domain PF00249
Length = 310
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 121 KLNPFGGNLSPRKKERLFETIIEETGT--NWRALARKLKIREC 161
K N G SP + +L ++ IE +GT NW AL +K+ ++ C
Sbjct: 9 KANVKKGPWSPEEDAKL-KSYIENSGTGGNWIALPQKIGLKRC 50
>At2g36890.1 68415.m04524 myb family transcription factor (MYB38)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 298
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 121 KLNPFGGNLSPRKKERLFETIIEE-TGTNWRALARKLKIREC 161
K N G SP + +L + I ++ TG NW AL K +R C
Sbjct: 9 KANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRC 50
>At1g54385.1 68414.m06201 expressed protein ; expression supported
by MPSS
Length = 560
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 39 NSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDYELISVSK 98
NS++R ++ + L+K L+ R + SE + +KE+ R D +R YE + SK
Sbjct: 233 NSQKRLSAVQMLNFLMKCLDPRSIYSEVEL-IIKEMERCQSDQMAYVRGAA-YEAMMTSK 290
Query: 99 K 99
+
Sbjct: 291 R 291
>At1g05560.1 68414.m00573 UDP-glucose transferase (UGT75B2) similar
to UDP-glucose:indole-3-acetate
beta-D-glucosyltransferase GI:2149127 from (Arabidopsis
thaliana); identical to cDNA UDP-glucosyltransferase
(UGT75B2) GI:13661274
Length = 469
Score = 27.9 bits (59), Expect = 5.8
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 27 LRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLR 86
+R + S +K Y+ + + + L + E + + N+ + L+ A N +++
Sbjct: 165 IRDLPSFLTPSNTNKGAYDAFQEMMEFL-IKETKPKILINTFDSLEPEALTAFPNIDMVA 223
Query: 87 --KITDYELISVS-KKDLNNTVSSFTATHDEKIESVIKLNPFGG--NLSPRKKERLFETI 141
+ E+ S S K + + SS+T D K ES + FG LS ++ E L +
Sbjct: 224 VGPLLPTEIFSGSTNKSVKDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARAL 283
Query: 142 IE 143
IE
Sbjct: 284 IE 285
>At5g59980.1 68418.m07522 RNase P subunit p30 family protein
contains Pfam PF01876: RNase P subunit p30
Length = 581
Score = 27.5 bits (58), Expect = 7.6
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 30 VKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKIT 89
V E+ + +S +IETI+Q + +L D +N +EP V L++ LRK +
Sbjct: 368 VSELRMATASSDDNLREIETISQ-IDMLMSED---DNKVEPTTNV---LKEEAFALRKCS 420
Query: 90 DYELISVSKKDLNNTVSSFTATHDEKIESV------IKLNPFGGNLSPRKKE 135
+ + N T + FT T K E+ I+ GG++SP K +
Sbjct: 421 ASHGQGILVQ--NQTATPFTLTRCTKSEAASDVSMNIESTSEGGSMSPSKSD 470
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 45 EQIETIAQLLKVLEIRDVLSENSIEPLKEVAR 76
E+ E++A LLK +E+ D+ +I+ KEV R
Sbjct: 486 EERESVACLLKRIEMLDLFENQNIQMQKEVER 517
>At4g31390.1 68417.m04452 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 682
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 130 SPRKKERLFETIIEETGTNWRALARKLKIRECVIIKIDAEETTLADKVKKILEIYEQRAD 189
+P +ERL + + ++ W+ L L + + + K+ + +V+ L++ + D
Sbjct: 550 NPALRERLIQVLFKDGVFQWKRLENLLSLAKENVAKMSSNPNLRVKRVESKLDLTDTIKD 609
Query: 190 PQRWFFVLCDALEESYRRDI 209
R F L+E RR +
Sbjct: 610 GARLFL-----LDEGIRRKL 624
>At4g09960.1 68417.m01629 MADS-box protein (AGL11)
Length = 230
Score = 27.5 bits (58), Expect = 7.6
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 27 LRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLR 86
++ + Y Q ++K R +QI+TI + L + D LS S++ LK+V RL+ +R
Sbjct: 82 VQEINAAYYQQESAKLR-QQIQTIQNSNRNL-MGDSLSSLSVKELKQVENRLEKAISRIR 139
Query: 87 KITDYELISV 96
+EL+ V
Sbjct: 140 S-KKHELLLV 148
>At3g18170.1 68416.m02312 expressed protein contains Pfam domain,
PF04577: Protein of unknown function (DUF563)
Length = 384
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 83 ELLRKITDYELISVSKKDLNNTVSSFT 109
EL+RK+++YE+I + ++D + SS T
Sbjct: 141 ELVRKLSNYEVIYIDEEDETHCFSSVT 167
>At2g37420.1 68415.m04589 kinesin motor protein-related
Length = 1039
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 148 NWRALARKLKIRECVIIKIDAEETTLADKVK 178
N+ + KLK +E ++ ++ A ET+L D+ K
Sbjct: 505 NYIQVVSKLKEKEVIVSRMKASETSLIDRAK 535
>At1g74770.1 68414.m08663 expressed protein
Length = 985
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 3 KSEYSLLKDEIILRASGTPRHGEILRSVKEIYKQS-INSKRRYEQIETIAQLLKVLEIRD 61
K E L + E G+ + G+ ++ K K S ++YEQ+ T+++ V+ I+
Sbjct: 904 KEEKDLERSESKKICRGSNQEGDKEQTDKMSQKVSQFGPSKKYEQLLTMSEEELVVVIKK 963
Query: 62 VLSENSIEPLKE 73
+ ++S++P K+
Sbjct: 964 ISCDSSLDPQKK 975
>At1g31814.1 68414.m03906 expressed protein
Length = 473
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/58 (18%), Positives = 31/58 (53%)
Query: 34 YKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDY 91
Y + ++ +++ + ++KV++ +++ SE E L+E + L+D ++ T +
Sbjct: 305 YSLKVQNEATDKELSALRAVIKVVKEKNIESEFMEEKLEECVKELEDQKAQRKRATKF 362
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.134 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,790,445
Number of Sequences: 28952
Number of extensions: 190331
Number of successful extensions: 916
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 898
Number of HSP's gapped (non-prelim): 49
length of query: 221
length of database: 12,070,560
effective HSP length: 78
effective length of query: 143
effective length of database: 9,812,304
effective search space: 1403159472
effective search space used: 1403159472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -