Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000310-TA|BGIBMGA000310-PA|IPR000195|RabGAP/TBC
(480 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical p... 90 3e-18
U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical pr... 77 4e-14
U23448-4|AAS80348.1| 330|Caenorhabditis elegans Hypothetical pr... 75 1e-13
Z78539-6|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr... 70 3e-12
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 66 5e-11
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 66 5e-11
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 66 5e-11
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 66 5e-11
U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical pr... 66 7e-11
U49940-1|AAA93411.2| 435|Caenorhabditis elegans Hypothetical pr... 64 2e-10
U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical pr... 60 4e-09
U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical pr... 60 4e-09
U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical pr... 60 4e-09
AF040654-3|AAK21451.2| 445|Caenorhabditis elegans Hypothetical ... 59 6e-09
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 55 1e-07
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 55 1e-07
U49830-13|AAK31474.1| 826|Caenorhabditis elegans Hypothetical p... 48 1e-05
Z93394-2|CAB07701.2| 251|Caenorhabditis elegans Hypothetical pr... 38 0.021
Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical pr... 34 0.19
Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical pr... 34 0.25
U53341-7|AAC69111.3| 744|Caenorhabditis elegans Hypothetical pr... 34 0.25
Z68117-1|CAA92181.2| 459|Caenorhabditis elegans Hypothetical pr... 33 0.44
Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical pr... 32 0.78
Z70205-10|CAD44096.1| 409|Caenorhabditis elegans Hypothetical p... 29 5.5
Z70205-9|CAA94122.2| 887|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z68003-6|CAD44105.1| 409|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 29 5.5
>U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical
protein ZK1248.10 protein.
Length = 908
Score = 90.2 bits (214), Expect = 3e-18
Identities = 57/170 (33%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 127 NQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSLKVMIYLVEAVLPEGYF 186
N LR VL A+ N VGYCQG N LAAI L +D E DS ++ VE + PEGY+
Sbjct: 704 NIEKLRNVLYAFRYHNSHVGYCQGLNRLAAIALLNLD--EQDSFWFLVACVEHLQPEGYY 761
Query: 187 ADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFTMQWFLTLYAT 246
L G AD A H+ L+ ++ L F + WFLT +
Sbjct: 762 TSSLIGAVADQKVLRDLVAEKLPKLAAHLRALE-------VDLSL---FALSWFLTCFVD 811
Query: 247 WLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILSARSADEFYSCM 296
LP L I+D L +GN+VL ALA++ + + +L ++ + C+
Sbjct: 812 VLPHSIYLTIFDAFLYEGNKVLFRFALALFKICEPHVLQCKTIGTVHQCL 861
>U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical
protein F41D9.1 protein.
Length = 826
Score = 76.6 bits (180), Expect = 4e-14
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 16/227 (7%)
Query: 59 GVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQPDDTELGAQILKDLHRTGCSL 118
G+P R LW L+ T + D + + AQ D +G QI +DL RT +
Sbjct: 150 GIPHSMRPFLWPRLS--GATKKQKDAKYTYESVLQQCAQ-DKPSIGVQIERDLLRTLPNN 206
Query: 119 FC-GAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSLKVMIYLV 177
C + E LRR+L A ++GYCQG ++ A +L + SE + +M L+
Sbjct: 207 ICFWKKNSEGIEALRRILKCVAFIYPDLGYCQGMGVIVATLL--LYCSEETTFWMMTALI 264
Query: 178 EAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFTM 237
E +LP ++ L GL AD H+ L + + +E L T+
Sbjct: 265 EDILPPNFYTQTLLGLQADERV-------SRHLMKCHVPDLNKALEDYEVEVSL---LTV 314
Query: 238 QWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRIL 284
W LTL+ + +LR+WD I G + ++I M + I+
Sbjct: 315 SWLLTLFGSVFRTRVMLRVWDFIFYSGGVNIFRVIISILKMKEQEIV 361
>U23448-4|AAS80348.1| 330|Caenorhabditis elegans Hypothetical
protein C04A2.1 protein.
Length = 330
Score = 74.5 bits (175), Expect = 1e-13
Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 29/234 (12%)
Query: 59 GVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQPDDTELGAQILKDLHRT-GCS 117
G+P FRK+LWL A GV W E PD E+ QI DL RT +
Sbjct: 78 GIPHTFRKELWLRSCPSR--ADGV-WQRHE--------VPD--EVIKQIKLDLPRTFPDN 124
Query: 118 LFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSLKVMIYLV 177
F EG + L R L A A VGYCQG N +A +IL V++ ES ++ ++++LV
Sbjct: 125 KFLKTEG--TRKTLGRALFAVAEHIPSVGYCQGLNFVAGVILLVVN-DESRAIDLLVHLV 181
Query: 178 EAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFTM 237
+ Y+ ++ GL DM ++ L D G D+
Sbjct: 182 SQ--RQEYYGKNMIGLRRDMHVLHSLLREHCPRVVVTLEKL----DVG------LDMLVG 229
Query: 238 QWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILSARSADE 291
+WF+ + LP E++LR+WD ++ +G+E L A+A++ I S S D+
Sbjct: 230 KWFVCWFVESLPMETVLRLWDCLIYEGDEWLFRIAVALFRSNMIAISSCESIDQ 283
>Z78539-6|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
protein C31E10.8 protein.
Length = 1272
Score = 70.1 bits (164), Expect = 3e-12
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 131 LRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSLKVMIYLVEAVLPEGYFADDL 190
L +VL A+ N ++GYCQG N LAA L + D+ +I + E + YF +L
Sbjct: 453 LLQVLHAFCLHNSQIGYCQGMNFLAATALLFV--GPEDAFWFLIAVTERYFDKTYFDSNL 510
Query: 191 RGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFTMQWFLTLYATWLPR 250
G AD H+ L I+ FT+ WF++L+ +P
Sbjct: 511 TGAQADQEVLKGLLEVQHPKIMKHLKSLD-------IDVAS---FTLNWFISLFFDAVPF 560
Query: 251 ESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILSARSA 289
+LLRIWD LL+G +VL A+ + ++ I+S A
Sbjct: 561 NTLLRIWDCFLLEGPKVLFRFAIVLIGKHEEEIISRGDA 599
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 66.1 bits (154), Expect = 5e-11
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 106 QILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKS 165
+I +DLHR+ +G A LRR+L AYA N +GYCQ N++ +++L +
Sbjct: 533 EIERDLHRSLPEHPAFQQGPGIDA-LRRILTAYAFRNPNIGYCQAMNIVGSVLL--LFTK 589
Query: 166 ESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGG 225
E ++ +++ + E +LP+ Y+ + G D F + L
Sbjct: 590 EEEAFWLLVAVCERLLPD-YYNTKVVGALVDQGVFSELVERLLPTVGAQLTRL------- 641
Query: 226 GIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILS 285
L D+ + WFLT++ + + ++ +RI DL +G ++ AL + + I
Sbjct: 642 ----GLDDMVALSWFLTVFLSAIKFDAAVRILDLFFFEGARLMFQVALEMLKENEKLICE 697
Query: 286 ARSADEFYSCMGGGAGAVWEAGDSLVAR 313
+R E + +++E GD++V R
Sbjct: 698 SRDDGEILMSLAKYTESIYE-GDTVVER 724
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 66.1 bits (154), Expect = 5e-11
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 106 QILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKS 165
+I +DLHR+ +G A LRR+L AYA N +GYCQ N++ +++L +
Sbjct: 533 EIERDLHRSLPEHPAFQQGPGIDA-LRRILTAYAFRNPNIGYCQAMNIVGSVLL--LFTK 589
Query: 166 ESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGG 225
E ++ +++ + E +LP+ Y+ + G D F + L
Sbjct: 590 EEEAFWLLVAVCERLLPD-YYNTKVVGALVDQGVFSELVERLLPTVGAQLTRL------- 641
Query: 226 GIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILS 285
L D+ + WFLT++ + + ++ +RI DL +G ++ AL + + I
Sbjct: 642 ----GLDDMVALSWFLTVFLSAIKFDAAVRILDLFFFEGARLMFQVALEMLKENEKLICE 697
Query: 286 ARSADEFYSCMGGGAGAVWEAGDSLVAR 313
+R E + +++E GD++V R
Sbjct: 698 SRDDGEILMSLAKYTESIYE-GDTVVER 724
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 66.1 bits (154), Expect = 5e-11
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 106 QILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKS 165
+I +DLHR+ +G A LRR+L AYA N +GYCQ N++ +++L +
Sbjct: 533 EIERDLHRSLPEHPAFQQGPGIDA-LRRILTAYAFRNPNIGYCQAMNIVGSVLL--LFTK 589
Query: 166 ESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGG 225
E ++ +++ + E +LP+ Y+ + G D F + L
Sbjct: 590 EEEAFWLLVAVCERLLPD-YYNTKVVGALVDQGVFSELVERLLPTVGAQLTRL------- 641
Query: 226 GIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILS 285
L D+ + WFLT++ + + ++ +RI DL +G ++ AL + + I
Sbjct: 642 ----GLDDMVALSWFLTVFLSAIKFDAAVRILDLFFFEGARLMFQVALEMLKENEKLICE 697
Query: 286 ARSADEFYSCMGGGAGAVWEAGDSLVAR 313
+R E + +++E GD++V R
Sbjct: 698 SRDDGEILMSLAKYTESIYE-GDTVVER 724
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 66.1 bits (154), Expect = 5e-11
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 106 QILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKS 165
+I +DLHR+ +G A LRR+L AYA N +GYCQ N++ +++L +
Sbjct: 533 EIERDLHRSLPEHPAFQQGPGIDA-LRRILTAYAFRNPNIGYCQAMNIVGSVLL--LFTK 589
Query: 166 ESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGG 225
E ++ +++ + E +LP+ Y+ + G D F + L
Sbjct: 590 EEEAFWLLVAVCERLLPD-YYNTKVVGALVDQGVFSELVERLLPTVGAQLTRL------- 641
Query: 226 GIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILS 285
L D+ + WFLT++ + + ++ +RI DL +G ++ AL + + I
Sbjct: 642 ----GLDDMVALSWFLTVFLSAIKFDAAVRILDLFFFEGARLMFQVALEMLKENEKLICE 697
Query: 286 ARSADEFYSCMGGGAGAVWEAGDSLVAR 313
+R E + +++E GD++V R
Sbjct: 698 SRDDGEILMSLAKYTESIYE-GDTVVER 724
>U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical
protein F35H12.2b protein.
Length = 934
Score = 65.7 bits (153), Expect = 7e-11
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 19/221 (8%)
Query: 59 GVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQPDDTELGAQILKDLHRT--GC 116
G+P R ++W L+ + A LV + F +QP +E I++D+HRT
Sbjct: 422 GIPDKLRGRVWQLLSNVRILAIDQPDLVEKYHIF--LSQPCPSE--QVIMRDIHRTFPAH 477
Query: 117 SLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSLKVMIYL 176
F ++G+ Q+ L ++ Y+ +++EV YCQG + LAA +L M + ++ V I
Sbjct: 478 DYFKESQGKGQQS-LYKISKVYSLYDEEVSYCQGLSFLAASLLLHMPEEQAFCTLVKIMF 536
Query: 177 VEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFT 236
+ F L +HH++H+ GIE + +
Sbjct: 537 NYGL--RDLFKLGFDNLHLRFFQLTALLKDYIPDLSHHLEHI-------GIETHM---YA 584
Query: 237 MQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWD 277
QWFLTL+ P + + I DL L G + +LA+ D
Sbjct: 585 SQWFLTLFTAKFPLQMVFFILDLFLSQGMNTIFHISLALLD 625
>U49940-1|AAA93411.2| 435|Caenorhabditis elegans Hypothetical
protein T24D11.1 protein.
Length = 435
Score = 64.1 bits (149), Expect = 2e-10
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 21/226 (9%)
Query: 59 GVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQPDDTELGAQILKDLHRTGCSL 118
G+PQHFR W L+ N + V L ++ R ++ + I +D+ RT L
Sbjct: 110 GIPQHFRMIAWQNLS--NASVSSVHDLYSDY--MRQSSVYEKV-----IQRDIPRTYPEL 160
Query: 119 FCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSLKVMIYLVE 178
+G Q++L V+ AY+ +KEVGYCQG + ++L + E ++ V++ L+E
Sbjct: 161 DFFKDGERGQSLLFNVIKAYSVHDKEVGYCQGSAFIVGLLL--LQMPEEEAFAVLVSLME 218
Query: 179 AVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFTMQ 238
+ + L M H +++ G + ++
Sbjct: 219 NYRLRELYKPTMTDLGLCMFQLECLVQDQMPDLYTHFNNM-------GFD---TSMYASS 268
Query: 239 WFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRIL 284
WFLTL+ T +P + RI D L++G + + ++AI + +L
Sbjct: 269 WFLTLFTTTMPLDIANRIMDCFLVEGMDFIFCISIAILQQARIELL 314
>U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical
protein R11B5.1 protein.
Length = 614
Score = 59.7 bits (138), Expect = 4e-09
Identities = 61/237 (25%), Positives = 96/237 (40%), Gaps = 22/237 (9%)
Query: 59 GVPQHFRKKLW-LTLAER-NLTARGVDWLV--AERACFRGTAQPDDTELG------AQIL 108
GVP R +LW LT+ + +T D L+ AE + A+ + QI
Sbjct: 298 GVPAKVRGELWFLTIGNQIEITKELYDGLMDQAEEKIAKQLAEQNKNSAERKETSVTQIH 357
Query: 109 KDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESD 168
D RT SL + L ++L AYA ++GY Q +AA++L MD
Sbjct: 358 LDATRTFTSLGMFQKDGPYYDHLLKLLSAYAILRPDIGYVQSMTFIAAVLLIQMD--PYP 415
Query: 169 SLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIE 228
+ L++ L +F ++ A+ H+D L
Sbjct: 416 AFISFANLLDRSLQSAFFGLKQPQMTEYFIAYDRYLEQELPALHQHLDKLD--------- 466
Query: 229 PPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILS 285
PD++ ++W +YA LP + RIWD+ DG E L AL I M + ++L+
Sbjct: 467 -VRPDLYLIEWTFAMYAKSLPLDVTCRIWDVYFRDGEEFLFKAALGILRMYEPKLLT 522
>U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical
protein F35H12.2c protein.
Length = 571
Score = 59.7 bits (138), Expect = 4e-09
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 59 GVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQPDDTELGAQILKDLHRT--GC 116
G+P R ++W L+ A LV + F +QP +E I++D+HRT
Sbjct: 63 GIPDKLRGRVWQLLSN----AIDQPDLVEKYHIF--LSQPCPSE--QVIMRDIHRTFPAH 114
Query: 117 SLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSLKVMIYL 176
F ++G+ Q+ L ++ Y+ +++EV YCQG + LAA +L M + ++ V I
Sbjct: 115 DYFKESQGKGQQS-LYKISKVYSLYDEEVSYCQGLSFLAASLLLHMPEEQAFCTLVKIMF 173
Query: 177 VEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFT 236
+ F L +HH++H+ GIE + +
Sbjct: 174 NYGL--RDLFKLGFDNLHLRFFQLTALLKDYIPDLSHHLEHI-------GIETHM---YA 221
Query: 237 MQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWD 277
QWFLTL+ P + + I DL L G + +LA+ D
Sbjct: 222 SQWFLTLFTAKFPLQMVFFILDLFLSQGMNTIFHISLALLD 262
>U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical
protein F35H12.2a protein.
Length = 930
Score = 59.7 bits (138), Expect = 4e-09
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 59 GVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQPDDTELGAQILKDLHRT--GC 116
G+P R ++W L+ A LV + F +QP +E I++D+HRT
Sbjct: 422 GIPDKLRGRVWQLLSN----AIDQPDLVEKYHIF--LSQPCPSE--QVIMRDIHRTFPAH 473
Query: 117 SLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSLKVMIYL 176
F ++G+ Q+ L ++ Y+ +++EV YCQG + LAA +L M + ++ V I
Sbjct: 474 DYFKESQGKGQQS-LYKISKVYSLYDEEVSYCQGLSFLAASLLLHMPEEQAFCTLVKIMF 532
Query: 177 VEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFT 236
+ F L +HH++H+ GIE + +
Sbjct: 533 NYGL--RDLFKLGFDNLHLRFFQLTALLKDYIPDLSHHLEHI-------GIETHM---YA 580
Query: 237 MQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWD 277
QWFLTL+ P + + I DL L G + +LA+ D
Sbjct: 581 SQWFLTLFTAKFPLQMVFFILDLFLSQGMNTIFHISLALLD 621
>AF040654-3|AAK21451.2| 445|Caenorhabditis elegans Hypothetical
protein R06B10.5 protein.
Length = 445
Score = 59.3 bits (137), Expect = 6e-09
Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 20/225 (8%)
Query: 55 RLPAGVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQPDDTELGAQILKDLHRT 114
R G+P R + W L+ C + Q D + I KDL R
Sbjct: 170 RCRKGIPPSLRGRAWKYLSGATYQMEVSSNRFVFDYCVK---QAGDPKWNDDIQKDLSRQ 226
Query: 115 --GCSLFC--GAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSL 170
+F G G + L +L A+ + E GYCQG +AA++L M D+
Sbjct: 227 FPEHEMFARVGKYGNNGKNDLFDLLKAWTILHPEEGYCQGQAPIAAVLL--MHMPVRDAF 284
Query: 171 KVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPP 230
+ + LP GY++ L + D H G++P
Sbjct: 285 YCFVQICHKYLP-GYYSSGLEAVQTDGDILTKLIKDRSKLTYRHFK-------ANGVDPA 336
Query: 231 LPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAI 275
L + ++WF+ + LP ++LR+WD+ L +G ++L AL +
Sbjct: 337 L---YMIEWFMCCFCRTLPWPTVLRVWDMFLCEGVKILFKVALVL 378
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 54.8 bits (126), Expect = 1e-07
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 128 QAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSLKVMIYLVEAVLPEGYFA 187
Q L VL AY+ +N EVGYCQG + +AA+ L +D+ ++ + + G+F
Sbjct: 658 QKSLLNVLAAYSMFNTEVGYCQGMSQIAALFLMYLDEEDAFWSLHQLMVSPKHTMHGFFV 717
Query: 188 DDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFTMQWFLTLYATW 247
L F H++ + +P ++ +W+ +
Sbjct: 718 PGFPKLQRYEEHFKRVLKKYKPRVYKHLE-----------KQDIPYIYLTKWWFGCFLDR 766
Query: 248 LPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRI 283
+P LR+WD+ L++G+ +L+ A I M + +
Sbjct: 767 VPFSLALRLWDVFLVEGDCILIAMAYNIMKMHEKNV 802
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 54.8 bits (126), Expect = 1e-07
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 128 QAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSESDSLKVMIYLVEAVLPEGYFA 187
Q L VL AY+ +N EVGYCQG + +AA+ L +D+ ++ + + G+F
Sbjct: 658 QKSLLNVLAAYSMFNTEVGYCQGMSQIAALFLMYLDEEDAFWSLHQLMVSPKHTMHGFFV 717
Query: 188 DDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFTMQWFLTLYATW 247
L F H++ + +P ++ +W+ +
Sbjct: 718 PGFPKLQRYEEHFKRVLKKYKPRVYKHLE-----------KQDIPYIYLTKWWFGCFLDR 766
Query: 248 LPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRI 283
+P LR+WD+ L++G+ +L+ A I M + +
Sbjct: 767 VPFSLALRLWDVFLVEGDCILIAMAYNIMKMHEKNV 802
>U49830-13|AAK31474.1| 826|Caenorhabditis elegans Hypothetical
protein C33F10.2 protein.
Length = 826
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 233 DVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILS 285
++F + WFLT +A LP L+ +WD ++ GN L+ ALA+ + L+D++L+
Sbjct: 603 ELFAIPWFLTCFAHELPLSKLVLLWDETMMHGNAFPLMIALAMLNRLRDKLLA 655
>Z93394-2|CAB07701.2| 251|Caenorhabditis elegans Hypothetical
protein Y48E1C.3 protein.
Length = 251
Score = 37.5 bits (83), Expect = 0.021
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 109 KDLHRTGCSL-FCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSES 167
KD+ RT ++ F + N L VL+ Y +N ++GY QG + A+ +L VM K E
Sbjct: 11 KDVARTDRTVPFFQGDDNVNLVHLHNVLMTYVMYNFDLGYVQGMSDFASPLLFVM-KDEV 69
Query: 168 DSLKVMIYLVE 178
D+ + L+E
Sbjct: 70 DTFWCFVGLME 80
>Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical
protein C38H2.1 protein.
Length = 863
Score = 34.3 bits (75), Expect = 0.19
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 106 QILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGF-NMLAAIILEVMDK 164
+I KD+ R +L + ++N LRRV+ Y R N E GY QG ++LA +++ D+
Sbjct: 650 RIDKDVERCDRNLMFFSN-KDNLESLRRVMYTYVRRNLEEGYTQGMCDLLAPLLVTFEDE 708
Query: 165 S 165
+
Sbjct: 709 A 709
>Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical
protein F20D1.2 protein.
Length = 641
Score = 33.9 bits (74), Expect = 0.25
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 232 PDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLL-TALAIWDMLQDRILSAR 287
P ++T WF TL+++ + ES +W L + G+ L+ A+ +D IL +
Sbjct: 177 PSMYTKNWFATLFSSSMSTESCHELWKLYIEQGDPFLVFHLAIVFLINAKDEILQVK 233
>U53341-7|AAC69111.3| 744|Caenorhabditis elegans Hypothetical
protein F49E10.1 protein.
Length = 744
Score = 33.9 bits (74), Expect = 0.25
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 107 ILKDLHRTGC-SLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKS 165
I+KD+ RT + F + N +++ +LL YA ++ Y QG + L A +L + K
Sbjct: 492 IVKDVVRTDRKNPFFAGDNNPNSEIMKNILLNYAVMYPDINYIQGMSDLLAPLLSTL-KD 550
Query: 166 ESDS 169
E DS
Sbjct: 551 EVDS 554
>Z68117-1|CAA92181.2| 459|Caenorhabditis elegans Hypothetical
protein F45E6.3 protein.
Length = 459
Score = 33.1 bits (72), Expect = 0.44
Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 22/169 (13%)
Query: 130 MLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDK---------SESDSLKVMIYLVEAV 180
++ R+L YA+ N V Y QG N L A I V +E+D+ L+ V
Sbjct: 234 IVERILFIYAKLNPGVQYVQGMNELVAPIYYVFANDADDEWAAYAEADTFFCFQQLMSEV 293
Query: 181 LPE--GYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGGGIEPPLPDVFTMQ 238
D G+ + M+AF H+ I P + +
Sbjct: 294 KDNFIKKLDDSNCGIESSMSAFHNLISTFDTELHKHLTLTLEIK---------PQFYAFR 344
Query: 239 WFLTLYATWLPRESLLRIWDLILLDGNEVLLL--TALAIWDMLQDRILS 285
W L + P ++ +WD + D LL LA+ ++ ++ +++
Sbjct: 345 WLSLLLSQEFPLPDVITLWDALFSDPQRFALLQYVCLAMMELKREPLIN 393
>Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical
protein B0393.2 protein.
Length = 585
Score = 32.3 bits (70), Expect = 0.78
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 232 PDVFTMQWFLTLYATWLPRESLLRIWDLILLD 263
P ++ ++W L+ LP LL +WD++L+D
Sbjct: 290 PQLYGIRWLRLLFGRELPLHDLLFLWDVLLID 321
>Z70205-10|CAD44096.1| 409|Caenorhabditis elegans Hypothetical
protein E02H4.3b protein.
Length = 409
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 94 GTAQPDDTELGAQILKDLHRTGCSLFCGAEGRENQAMLRRVL 135
G +QP D IL +L+ TG +LF E RE+ AM+ RVL
Sbjct: 264 GWSQPCDVWSIGCILYELY-TGVTLFQTHENREHLAMMERVL 304
>Z70205-9|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 94 GTAQPDDTELGAQILKDLHRTGCSLFCGAEGRENQAMLRRVL 135
G +QP D IL +L+ TG +LF E RE+ AM+ RVL
Sbjct: 742 GWSQPCDVWSIGCILYELY-TGVTLFQTHENREHLAMMERVL 782
>Z68003-6|CAD44105.1| 409|Caenorhabditis elegans Hypothetical
protein E02H4.3b protein.
Length = 409
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 94 GTAQPDDTELGAQILKDLHRTGCSLFCGAEGRENQAMLRRVL 135
G +QP D IL +L+ TG +LF E RE+ AM+ RVL
Sbjct: 264 GWSQPCDVWSIGCILYELY-TGVTLFQTHENREHLAMMERVL 304
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 94 GTAQPDDTELGAQILKDLHRTGCSLFCGAEGRENQAMLRRVL 135
G +QP D IL +L+ TG +LF E RE+ AM+ RVL
Sbjct: 742 GWSQPCDVWSIGCILYELY-TGVTLFQTHENREHLAMMERVL 782
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,377,134
Number of Sequences: 27539
Number of extensions: 317313
Number of successful extensions: 684
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 638
Number of HSP's gapped (non-prelim): 37
length of query: 480
length of database: 12,573,161
effective HSP length: 84
effective length of query: 396
effective length of database: 10,259,885
effective search space: 4062914460
effective search space used: 4062914460
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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