Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000310-TA|BGIBMGA000310-PA|IPR000195|RabGAP/TBC
(480 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g55020.1 68416.m06110 RabGAP/TBC domain-containing protein lo... 98 1e-20
At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein lo... 96 5e-20
At3g07890.1 68416.m00964 RabGAP/TBC domain-containing protein si... 95 1e-19
At2g39280.1 68415.m04823 RabGAP/TBC domain-containing protein co... 93 4e-19
At5g15930.1 68418.m01863 plant adhesion molecule 1 (PAM1) identi... 66 5e-11
At3g02460.1 68416.m00233 plant adhesion molecule, putative stron... 62 6e-10
At3g02460.2 68416.m00234 plant adhesion molecule, putative stron... 52 6e-07
At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein lo... 45 1e-04
At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein lo... 42 7e-04
At5g52590.1 68418.m06530 RabGAP/TBC domain-containing protein co... 42 0.001
At1g04830.1 68414.m00479 RabGAP/TBC domain-containing protein lo... 41 0.002
At5g54780.1 68418.m06824 RabGAP/TBC domain-containing protein co... 38 0.011
At2g19240.1 68415.m02246 RabGAP/TBC domain-containing protein lo... 36 0.059
At5g53570.1 68418.m06656 RabGAP/TBC domain-containing protein si... 35 0.14
At4g28550.1 68417.m04084 RabGAP/TBC domain-containing protein si... 35 0.14
At4g27100.1 68417.m03895 RabGAP/TBC domain-containing protein si... 35 0.14
At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein si... 34 0.24
At5g57210.1 68418.m07147 microtubule-associated protein-related ... 33 0.32
At3g49350.1 68416.m05395 RabGAP/TBC domain-containing protein si... 33 0.32
At2g20440.1 68415.m02386 RabGAP/TBC domain-containing protein si... 33 0.32
At5g24390.1 68418.m02875 RabGAP/TBC domain-containing protein si... 33 0.42
At4g29950.1 68417.m04260 microtubule-associated protein identica... 32 0.97
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 31 1.7
At1g48040.1 68414.m05354 protein phosphatase 2C-related / PP2C-r... 31 2.2
At4g29950.2 68417.m04261 microtubule-associated protein identica... 30 3.9
>At3g55020.1 68416.m06110 RabGAP/TBC domain-containing protein low
similarity to SP|Q9BXI6 EBP50-PDZ interactor of 64 kDa
(EPI64 protein) {Homo sapiens}; contains Pfam profile
PF00566: TBC domain
Length = 777
Score = 98.3 bits (234), Expect = 1e-20
Identities = 69/231 (29%), Positives = 117/231 (50%), Gaps = 22/231 (9%)
Query: 106 QILKDLHRTGCSLFCG--AEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMD 163
QI KDL RT F G A + + LRR+L AYAR N VGYCQ N AA++L +M
Sbjct: 309 QIEKDLPRT----FPGHPALDDDGRNALRRLLTAYARHNPSVGYCQAMNFFAALLLLLM- 363
Query: 164 KSESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISD 223
E ++ +I L++ GY+++++ D HH+D+L
Sbjct: 364 -PEENAFWALIGLIDDYF-NGYYSEEMIESQVDQLVLEELVRERFPKLVHHLDYL----- 416
Query: 224 GGGIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLL-TALAIWDMLQDR 282
G++ T WFL+++ LP ES+LR+WD++L +G V+L TALA+ ++
Sbjct: 417 --GVQVAW---VTGPWFLSIFMNMLPWESVLRVWDVLLFEGTRVMLFRTALALMELYGPA 471
Query: 283 ILSARSADEFYSCMGGGAGAVWEAGDSLVARVVAFGSAPE--LPRLRSLHR 331
+++ + A + + + G+ +++ ++ + + + E L LRS HR
Sbjct: 472 LVTTKDAGDAVTLLQSLTGSTFDSSQLVLTACMGYQNVHEIRLQELRSKHR 522
>At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein low
similarity to Rab6 GTPase activating protein, GAPCenA
[Homo sapiens] GI:12188746; contains Pfam profile
PF00566: TBC domain
Length = 882
Score = 95.9 bits (228), Expect = 5e-20
Identities = 70/291 (24%), Positives = 137/291 (47%), Gaps = 22/291 (7%)
Query: 46 WLHAMRLVARLPAGVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQPDDTELGA 105
W + ++ RL GVP+ R ++W + AR V+ + + + +++
Sbjct: 306 WYEELEVLVRL--GVPKDLRGEVWQAFV--GVKARRVERYYQDLLAQITNSDENSSDVQR 361
Query: 106 QILKDLHRTGCSLFCG--AEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMD 163
+ K + + F G A + LRR+LLAYA N VGYCQ N A ++L +M
Sbjct: 362 KWKKQIEKDIPRTFPGHPALNENGRDSLRRILLAYACHNPSVGYCQAMNFFAGLLLLLM- 420
Query: 164 KSESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISD 223
E ++ ++ +++ +GY+ +++ D F +H+D+L
Sbjct: 421 -PEENAFWTLVGIIDDYF-DGYYTEEMIESQVDQLVFEELMRERFPKLVNHLDYL----- 473
Query: 224 GGGIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLL-TALAIWDMLQDR 282
G++ + WFL+++ +P E +LR+WD++L +GN V+L TA AI ++
Sbjct: 474 --GVQVAW---ISGPWFLSIFVNIIPWECVLRMWDVLLFEGNRVVLFRTAFAIMELYGPA 528
Query: 283 ILSARSADEFYSCMGGGAGAVWEAGDSLVARVVAFGSAPE--LPRLRSLHR 331
I++ + A + + + A + +++ ++ + + S E L LR +HR
Sbjct: 529 IVATKDAGDAITSLQSLASSTFDSSQLVLTACMGYISTNEARLEELRKIHR 579
>At3g07890.1 68416.m00964 RabGAP/TBC domain-containing protein
similar to plant adhesion molecule 1 [Arabidopsis
thaliana] GI:3511223; contains Pfam profile PF00566: TBC
domain
Length = 400
Score = 94.7 bits (225), Expect = 1e-19
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 18/274 (6%)
Query: 48 HAMRLVARLPAGVPQHFRKKLWLTL--AERNLTARGVDWLVAERACFRGTAQPDDTELGA 105
+A+ L + G+P R K+W +L A + + + G P
Sbjct: 105 NAITLKRLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYSDLTKAVEGMVTP----ATR 160
Query: 106 QILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKS 165
QI DL RT + E A LRRVL+ Y+ + +VGYCQG N +AA++L VM K+
Sbjct: 161 QIDHDLPRTFPG-HPWLDTPEGHAALRRVLVGYSFRDSDVGYCQGLNYVAALLLLVM-KT 218
Query: 166 ESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISDGG 225
E D+ ++ L+E VL + +L G + F A H++ +
Sbjct: 219 EEDAFWMLAVLLENVLVRDCYTTNLSGCHVEQRVFKDLLAQKCSRIATHLEDM------- 271
Query: 226 GIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILS 285
G + L +WFL L++ LP E+ LR+WD++ +G +VL ALAI+ M ++ +L
Sbjct: 272 GFDVSL---VATEWFLCLFSKSLPSETTLRVWDVLFYEGAKVLFHAALAIFKMKENELLM 328
Query: 286 ARSADEFYSCMGGGAGAVWEAGDSLVARVVAFGS 319
+ + + + +++ + L GS
Sbjct: 329 THQVGDVINILQKTSHQLFDPDELLTVAFEKIGS 362
>At2g39280.1 68415.m04823 RabGAP/TBC domain-containing protein
contains Pfam profile PF00566: TBC domain
Length = 771
Score = 93.1 bits (221), Expect = 4e-19
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 22/231 (9%)
Query: 106 QILKDLHRTGCSLFCGAEGREN--QAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMD 163
QI KDL RT F G ++ + LRR+L AYAR N VGYCQ N AA++L +M
Sbjct: 296 QIEKDLPRT----FPGHPALDDDFRNALRRLLTAYARHNPSVGYCQAMNFFAALLLLLMP 351
Query: 164 KSESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDHLQRISD 223
E ++ + +++ + Y+++++ D HH+D+L
Sbjct: 352 --EENAFWSLTGIIDDYFHD-YYSEEMLESQVDQRVLEELLRERFPKLVHHLDYL----- 403
Query: 224 GGGIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLL-TALAIWDMLQDR 282
G++ T WFLT++ LP ES+LR+WD++L +GN V+L TALA+ +
Sbjct: 404 --GVQVAC---VTGPWFLTIFINMLPWESVLRVWDVLLFEGNRVMLFRTALALMEFYGPA 458
Query: 283 ILSARSADEFYSCMGGGAGAVWEAGDSLVARVVAFGSAPE--LPRLRSLHR 331
+++ + + + + G+ +++ + + + + E L LRS HR
Sbjct: 459 LVTTKDIGDAVTLLQSMTGSTFDSSQLVFTACMGYQNVHESKLQELRSKHR 509
>At5g15930.1 68418.m01863 plant adhesion molecule 1 (PAM1) identical
to plant adhesion molecule 1 [Arabidopsis thaliana]
GI:3511223; contains Pfam profile PF00566: TBC domain
Length = 356
Score = 66.1 bits (154), Expect = 5e-11
Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 27/250 (10%)
Query: 44 AEWLHAMR-----LVARLPAGVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQP 98
++W H +R + R+ G+P R +W L + D L+ +
Sbjct: 65 SDWKHYVRRKPHVVKRRIRKGIPDCLRGLVW------QLISGSRDLLLMNPGVYVQLVIY 118
Query: 99 DDTELGAQILKDLHRTGCS-LFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAI 157
+ + I++D+ RT S +F Q L VL AY+ ++++VGY QG +A +
Sbjct: 119 ETSASELDIIRDISRTFPSHVFFQKRHGPGQRSLYNVLKAYSVYDRDVGYVQGMGFIAGL 178
Query: 158 ILEVMDKSESDSLKVMIYLVEAVLP---EGYFADDLRGLSADMAAFXXXXXXXXXXXAHH 214
+L M SE D+ +++ L++ + EG + L + + F H
Sbjct: 179 LLLYM--SEEDAFWLLVALLKGAVHSPIEGLYQAGLPLVQQYLLQFDQLVRELMPKLGEH 236
Query: 215 MDHLQRISDGGGIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALA 274
E P ++ QWF+T+++ LP S LRIWD+ L +G +++ LA
Sbjct: 237 FTQ----------EMINPSMYASQWFITVFSYSLPFHSALRIWDVFLAEGVKIVFKVGLA 286
Query: 275 IWDMLQDRIL 284
+ D +L
Sbjct: 287 LLKHCHDDLL 296
>At3g02460.1 68416.m00233 plant adhesion molecule, putative strong
similarity to plant adhesion molecule 1 [Arabidopsis
thaliana] GI:3511223; contains Pfam profile PF00566: TBC
domain
Length = 353
Score = 62.5 bits (145), Expect = 6e-10
Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 21/247 (8%)
Query: 44 AEWLHAMR-----LVARLPAGVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQP 98
++W H +R + R+ G+P R +W L + D L+ +
Sbjct: 68 SDWKHYVRRKPNVVRRRIRKGIPDCLRGLVW------QLISGSRDLLLMNPGVYEQLVIY 121
Query: 99 DDTELGAQILKDLHRTGCS-LFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAI 157
+ + I++D+ RT S +F Q L VL AY+ ++++VGY QG +A +
Sbjct: 122 ETSASELDIIRDISRTFPSHVFFQKRHGPGQRSLYNVLKAYSVYDRDVGYVQGMGFIAGL 181
Query: 158 ILEVMDKSESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDH 217
+L M SE D+ +++ L++ G + GL A + +
Sbjct: 182 LLLYM--SEEDAFWLLVALLK-----GAVHAPMEGLYH--AGLPLVQQYLFQLESLVKEL 232
Query: 218 LQRISDGGGIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLILLDGNEVLLLTALAIWD 277
+ ++ + E P ++ QWF+T+++ P LRIWD+ L +G +++ LA+
Sbjct: 233 IPKLGEHFTQEMINPSMYASQWFITVFSYSFPFPLALRIWDVFLSEGVKIVFKVGLALLK 292
Query: 278 MLQDRIL 284
QD ++
Sbjct: 293 YCQDELV 299
>At3g02460.2 68416.m00234 plant adhesion molecule, putative strong
similarity to plant adhesion molecule 1 [Arabidopsis
thaliana] GI:3511223; contains Pfam profile PF00566: TBC
domain
Length = 333
Score = 52.4 bits (120), Expect = 6e-07
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 44 AEWLHAMR-----LVARLPAGVPQHFRKKLWLTLAERNLTARGVDWLVAERACFRGTAQP 98
++W H +R + R+ G+P R +W L + D L+ +
Sbjct: 68 SDWKHYVRRKPNVVRRRIRKGIPDCLRGLVW------QLISGSRDLLLMNPGVYEQLVIY 121
Query: 99 DDTELGAQILKDLHRTGCS-LFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAI 157
+ + I++D+ RT S +F Q L VL AY+ ++++VGY QG +A +
Sbjct: 122 ETSASELDIIRDISRTFPSHVFFQKRHGPGQRSLYNVLKAYSVYDRDVGYVQGMGFIAGL 181
Query: 158 ILEVMDKSESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXXAHHMDH 217
+L M SE D+ +++ L+ +G + GL A + +
Sbjct: 182 LLLYM--SEEDAFWLLVALL-----KGAVHAPMEGLY--HAGLPLVQQYLFQLESLVKEL 232
Query: 218 LQRISDGGGIEPPLPDVFTMQWFLTLYATWLPRESLLRIWDLIL 261
+ ++ + E P ++ QWF+T+++ P LRIWD+ L
Sbjct: 233 IPKLGEHFTQEMINPSMYASQWFITVFSYSFPFPLALRIWDVFL 276
>At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 449
Score = 44.8 bits (101), Expect = 1e-04
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 15/198 (7%)
Query: 100 DTELGAQILKDLHRTGCSL--FCG--AEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLA 155
DTE+ QI +D+ RT + F G A + NQ L+ +L +A+ N + Y QG N +
Sbjct: 224 DTEVLEQIERDVMRTHPDMHFFSGDSAVAKSNQDALKNILTIFAKLNPGIRYVQGMNEIL 283
Query: 156 AIILEVM----DKSESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXX 211
A I + DK + + + L G+ + + L +
Sbjct: 284 APIFYIFKNDPDKGNAAYAESDAFFCFVELMSGFRDNFCQQLDNSVVGIRYTITRLSLLL 343
Query: 212 AHHMDHLQRISDGGGIEPPL-PDVFTMQWFLTLYATWLPRESLLRIWDLILLD---GNEV 267
HH + L R + + + P + +W L L IWD +L D E
Sbjct: 344 KHHDEELWRHLE---VTTKINPQFYAFRWITLLLTQEFNFVESLHIWDTLLSDPEGPQET 400
Query: 268 LLLTALAIWDMLQDRILS 285
LL A+ +++ R+L+
Sbjct: 401 LLRICCAMLILVRRRLLA 418
>At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 408
Score = 42.3 bits (95), Expect = 7e-04
Identities = 41/173 (23%), Positives = 67/173 (38%), Gaps = 12/173 (6%)
Query: 100 DTELGAQILKDLHRTGCSL--FCG--AEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLA 155
DTE+ QI +D+ RT + F G A + NQ L+ +L +A+ N + Y QG N +
Sbjct: 224 DTEVLEQIERDVMRTHPDMHFFSGDSAVAKSNQDALKNILTIFAKLNPGIRYVQGMNEIL 283
Query: 156 AIILEVM----DKSESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXX 211
A I + DK + + + L G+ + + L +
Sbjct: 284 APIFYIFKNDPDKGNAAYAESDAFFCFVELMSGFRDNFCQQLDNSVVGIRYTITRLSLLL 343
Query: 212 AHHMDHLQRISDGGGIEPPL-PDVFTMQWFLTLYATWLPRESLLRIWDLILLD 263
HH + L R + + + P + +W L L IWD +L D
Sbjct: 344 KHHDEELWRHLE---VTTKINPQFYAFRWITLLLTQEFNFVESLHIWDTLLSD 393
>At5g52590.1 68418.m06530 RabGAP/TBC domain-containing protein
contains similarity to SP|P48365 GTPase-activating
protein GYP7 {Saccharomyces cerevisiae}; contains Pfam
profile PF00566: TBC domain
Length = 338
Score = 41.5 bits (93), Expect = 0.001
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 109 KDLHRTGCSLFCGAEGRENQAM--LRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKSE 166
KD+ RT + F EG +N + +R +LL Y+ +N ++GYCQG + + IL VM+ E
Sbjct: 106 KDVVRTDRA-FEYYEGDDNLHVNSMRDILLTYSFYNFDLGYCQGMSDYLSPILFVME-DE 163
Query: 167 SDSLKVMIYLVEAVLPEGYFADDLRGLSADMAA 199
S+S + L+E + P F D G+ + A
Sbjct: 164 SESFWCFVALMERLGPN--FNRDQNGMHTQLFA 194
>At1g04830.1 68414.m00479 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 448
Score = 41.1 bits (92), Expect = 0.002
Identities = 42/173 (24%), Positives = 65/173 (37%), Gaps = 12/173 (6%)
Query: 100 DTELGAQILKDLHRTGCSL--FCGAEG--RENQAMLRRVLLAYARWNKEVGYCQGFNMLA 155
DTE QI +D+ RT + F G R NQ ++ +LL +A+ N+ + Y QG N +
Sbjct: 220 DTETIEQIDRDVKRTHPDIPFFSGESSFARSNQESMKNILLVFAKLNQGIRYVQGMNEIL 279
Query: 156 AIILEVM----DKSESDSLKVMIYLVEAVLPEGYFADDLRGLSADMAAFXXXXXXXXXXX 211
A I V D+ S + + L G+ + L +
Sbjct: 280 APIFYVFRNDPDEDSSSHAEADAFFCFVELLSGFRDFYCQQLDNSVVGIRSAITRLSQLV 339
Query: 212 AHHMDHLQRISDGGGIEPPL-PDVFTMQWFLTLYATWLPRESLLRIWDLILLD 263
H + L R + I + P + +W L L IWD +L D
Sbjct: 340 RKHDEELWRHLE---ITTKVNPQFYAFRWITLLLTQEFSFFDSLHIWDALLSD 389
>At5g54780.1 68418.m06824 RabGAP/TBC domain-containing protein
contains similarity to SP|P09379 GTPase-activating
protein GYP7 (Fragment) {Yarrowia lipolytica}; contains
Pfam profile PF00566: TBC domain
Length = 435
Score = 38.3 bits (85), Expect = 0.011
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 106 QILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKS 165
QI D++RT +L E +EN + L +L YA + +VGYCQG + L + ++ +++
Sbjct: 173 QIGLDVNRTDRTLVF-YEKKENLSKLWDILALYAWIDNDVGYCQGMSDLCSPMIMLLE-D 230
Query: 166 ESDSLKVMIYLVEAVLPEGYFADDLR--GLSADMAAFXXXXXXXXXXXAHHMDHL 218
E+D+ L+ + G F D R G+ A + HH++ L
Sbjct: 231 EADAFWCFERLMRRL--RGNFRDTGRSVGVEAQLTHLASITQIIDPKLHHHLEKL 283
>At2g19240.1 68415.m02246 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 840
Score = 35.9 bits (79), Expect = 0.059
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 100 DTELGAQILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIIL 159
+ EL + +DL R +C + Q MLRR+LL + + E GY QG + L A +L
Sbjct: 100 NAELEKTLDQDLSRLYPEHWCYFQTPRYQGMLRRILLLWCLKHPEYGYRQGMHELLAPLL 159
Query: 160 EVM 162
V+
Sbjct: 160 YVL 162
>At5g53570.1 68418.m06656 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 550
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 129 AMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDK 164
A L +L AYA ++ E+GYCQG + L + IL V+ +
Sbjct: 338 ARLVAILEAYAMYDPEIGYCQGMSDLLSPILAVISE 373
>At4g28550.1 68417.m04084 RabGAP/TBC domain-containing protein
similar to SP|P09379 GTPase-activating protein GYP7
(Fragment) {Yarrowia lipolytica}; contains Pfam profile
PF00566: TBC domain
Length = 424
Score = 34.7 bits (76), Expect = 0.14
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 105 AQILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDK 164
+QI D+ RT L C E NQA L +L Y N ++GY QG N + + ++ ++ +
Sbjct: 168 SQIGLDVVRTDRYL-CFYESESNQARLWDILSIYTWLNPDIGYVQGMNDICSPMI-ILLE 225
Query: 165 SESDS 169
E+D+
Sbjct: 226 DEADA 230
>At4g27100.1 68417.m03895 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 487
Score = 34.7 bits (76), Expect = 0.14
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 106 QILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKS 165
QI D++RT +L E +EN + L +L YA + +VGYCQG + L + ++ ++ +
Sbjct: 175 QIGLDVNRTDRALVF-YEKKENLSKLWDILSVYAWIDNDVGYCQGMSDLCSPMI-ILLED 232
Query: 166 ESDS 169
E+D+
Sbjct: 233 EADA 236
>At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 549
Score = 33.9 bits (74), Expect = 0.24
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 129 AMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMD 163
A L +L AYA ++ E+GYCQG + L + ++ VM+
Sbjct: 345 ARLVGILEAYAVYDPEIGYCQGMSDLLSPLIAVME 379
>At5g57210.1 68418.m07147 microtubule-associated protein-related
contains some similarity to microtubule-associated
protein GI:5032258 from [Arabidopsis thaliana]; contains
Pfam profile PF00566: TBC domain
Length = 737
Score = 33.5 bits (73), Expect = 0.32
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 128 QAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVM 162
Q MLRR+LL + + E+GY QG + L A +L V+
Sbjct: 138 QGMLRRILLLWCLKHPEIGYRQGMHELLAPLLYVL 172
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 232 PDVFTMQWFLTLYATWLPRESLLRIWDLIL-LDGNEV 267
P F ++W L+ P +LL +WD I D +EV
Sbjct: 343 PQYFALRWLRVLFGREFPLSNLLIVWDEIFSADNSEV 379
>At3g49350.1 68416.m05395 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 554
Score = 33.5 bits (73), Expect = 0.32
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 129 AMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVM 162
A L VL AYA ++ ++GYCQG + L + IL V+
Sbjct: 345 ARLVAVLEAYALYDPDIGYCQGMSDLLSPILSVI 378
>At2g20440.1 68415.m02386 RabGAP/TBC domain-containing protein
similar to SP|P09379 GTPase-activating protein GYP7
(Fragment) {Yarrowia lipolytica}; contains Pfam profile
PF00566: TBC domain
Length = 425
Score = 33.5 bits (73), Expect = 0.32
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 106 QILKDLHRTGCSLFCGAEGRENQAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVMDKS 165
QI D+ RT L C E NQ+ L VL Y N ++GY QG N + + ++ + D
Sbjct: 169 QIGLDVARTDRYL-CFYENDRNQSKLWDVLAIYTWLNLDIGYVQGMNDICSPMIILFD-D 226
Query: 166 ESDS 169
E D+
Sbjct: 227 EGDA 230
>At5g24390.1 68418.m02875 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 528
Score = 33.1 bits (72), Expect = 0.42
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 129 AMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVM 162
A L VL AYA + E+GYCQG + L + IL V+
Sbjct: 317 ARLVAVLEAYALHDPEIGYCQGMSDLLSPILSVI 350
>At4g29950.1 68417.m04260 microtubule-associated protein identical
to microtubule-associated protein GI:5032258 from
[Arabidopsis thaliana]; similar to TBC1 domain family
member 5 (Swiss-Prot:Q92609) [Homo sapiens]; contains
Pfam profile PF00566: TBC domain
Length = 828
Score = 31.9 bits (69), Expect = 0.97
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 128 QAMLRRVLLAYARWNKEVGYCQGFNMLAAIILEVM 162
Q MLRR+LL + + E GY QG + L A +L V+
Sbjct: 124 QGMLRRILLLWCLKHPEYGYRQGMHELLAPLLYVL 158
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 243 LYATW-LPRESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILSAR 287
L+ +W LPR++L ++WDL D + +L L I L +R R
Sbjct: 451 LFLSWRLPRDALKQVWDLSDQDNDSMLSLREFCIAVYLMERYREGR 496
>At1g48040.1 68414.m05354 protein phosphatase 2C-related /
PP2C-related similar to protein phosphatase-2C
GB:AAC36698 GI:3643085 from [Mesembryanthemum
crystallinum]
Length = 377
Score = 30.7 bits (66), Expect = 2.2
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 256 IWDLILLDGNEVLLLTALAIWDML--QDRILSARS-----ADEFYSCMG-GGAGAVWEAG 307
I +IL + +E L+L IWD+L Q+ + + R D M G A ++
Sbjct: 274 IGQIILTEDDEFLILACDGIWDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKEAARLQSS 333
Query: 308 DSLVARVVAFGSAPELPRLRSLHRYR 333
D++ V+ F S P P+ R R
Sbjct: 334 DNMTVIVICFSSVPSSPKQPQRRRLR 359
>At4g29950.2 68417.m04261 microtubule-associated protein identical
to microtubule-associated protein GI:5032258 from
[Arabidopsis thaliana]; similar to TBC1 domain family
member 5 (Swiss-Prot:Q92609) [Homo sapiens]; contains
Pfam profile PF00566: TBC domain
Length = 703
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 130 MLRRVLLAYARWNKEVGYCQGFNMLAAIILEVM 162
MLRR+LL + + E GY QG + L A +L V+
Sbjct: 1 MLRRILLLWCLKHPEYGYRQGMHELLAPLLYVL 33
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,347,514
Number of Sequences: 28952
Number of extensions: 328060
Number of successful extensions: 619
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 580
Number of HSP's gapped (non-prelim): 34
length of query: 480
length of database: 12,070,560
effective HSP length: 84
effective length of query: 396
effective length of database: 9,638,592
effective search space: 3816882432
effective search space used: 3816882432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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