GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000309-TA|BGIBMGA000309-PA|IPR001359|Synapsin
         (310 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    27   0.51 
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    25   2.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.6  
Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor pr...    23   8.3  

>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 46  CTVEPYIDAKYDIHIQKIGTNYKAFM 71
           C  EPYID  Y++ +Q+    ++A +
Sbjct: 225 CCTEPYIDITYNVTLQRQSDTHRAIV 250


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 79  WKTNQGSAMLEAIGMNDRYKMWIDEVSEIFGGLEVCAL-ELVVGKDG 124
           WK     A + A+   DR ++W   + E+ G + V A+ +LV+G  G
Sbjct: 122 WKCPPDDA-INAMTDTDRTELWQVRMRELSGAIAVAAVTQLVLGFSG 167


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)

Query: 45   YCTVEPYIDAKYDIHIQ 61
            Y T E Y   KY IHIQ
Sbjct: 1061 YATFEEYYHRKYKIHIQ 1077


>Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 4/31 (12%)

Query: 74  SISGNWKTNQGSAMLEAIGMNDRYKMWIDEV 104
           S+SG   T QG    E IGM D Y  W D V
Sbjct: 111 SLSGASVTYQG----EEIGMTDVYISWEDTV 137


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.135    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,106
Number of Sequences: 2123
Number of extensions: 7001
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 4
length of query: 310
length of database: 516,269
effective HSP length: 64
effective length of query: 246
effective length of database: 380,397
effective search space: 93577662
effective search space used: 93577662
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)