Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000309-TA|BGIBMGA000309-PA|IPR001359|Synapsin
(310 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021276-1|AAX33424.1| 537|Drosophila melanogaster RE44971p pro... 226 3e-59
AE014297-1115|AAN13462.1| 537|Drosophila melanogaster CG3985-PA... 226 3e-59
AE014297-1114|AAO41538.2| 981|Drosophila melanogaster CG3985-PF... 226 3e-59
AE014297-1113|AAN13463.2| 597|Drosophila melanogaster CG3985-PE... 226 3e-59
AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD... 226 3e-59
X95453-2|CAA64723.1| 980|Drosophila melanogaster homologous to ... 224 1e-58
X95453-1|CAA64722.1| 537|Drosophila melanogaster homologous to ... 224 1e-58
AE014297-1116|AAN13464.2| 488|Drosophila melanogaster CG3985-PC... 213 2e-55
X95454-1|CAA64724.1| 388|Drosophila melanogaster homologous to ... 211 8e-55
>BT021276-1|AAX33424.1| 537|Drosophila melanogaster RE44971p
protein.
Length = 537
Score = 226 bits (552), Expect = 3e-59
Identities = 101/167 (60%), Positives = 129/167 (77%), Gaps = 4/167 (2%)
Query: 7 KFPVVIKIGHAHSGVAKVKVDSLADFQDIAGVVAMLGT----YCTVEPYIDAKYDIHIQK 62
KFP V+K GH H GVA ++++ + QD AG+V+ G YCT+EPYIDAK+ +HIQK
Sbjct: 237 KFPSVLKAGHCHGGVATARLENQSALQDAAGLVSGAGNDSHCYCTIEPYIDAKFSVHIQK 296
Query: 63 IGTNYKAFMRKSISGNWKTNQGSAMLEAIGMNDRYKMWIDEVSEIFGGLEVCALELVVGK 122
IG NYKAFMRKSI+GNWKTNQGSAMLE I + ++YK W+DE+SE+FGG+EVC L +VV K
Sbjct: 297 IGNNYKAFMRKSITGNWKTNQGSAMLEQITLTEKYKSWVDEISELFGGMEVCGLSVVVAK 356
Query: 123 DGREHIIELNDSATSFMGDSQEEDRRNLAELVLQRMQAVCRPGLTKT 169
DGRE+II DS + +GD+QEEDRR +A+LV RMQ VCRP + +T
Sbjct: 357 DGREYIISACDSTFALIGDTQEEDRRQIADLVSGRMQNVCRPSMAQT 403
Score = 48.8 bits (111), Expect = 9e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 287 ALTEDAEDTMKNLRKTFAGIFGDM 310
++ EDAEDTMKNLRKTFAGIFGDM
Sbjct: 514 SVVEDAEDTMKNLRKTFAGIFGDM 537
>AE014297-1115|AAN13462.1| 537|Drosophila melanogaster CG3985-PA,
isoform A protein.
Length = 537
Score = 226 bits (552), Expect = 3e-59
Identities = 101/167 (60%), Positives = 129/167 (77%), Gaps = 4/167 (2%)
Query: 7 KFPVVIKIGHAHSGVAKVKVDSLADFQDIAGVVAMLGT----YCTVEPYIDAKYDIHIQK 62
KFP V+K GH H GVA ++++ + QD AG+V+ G YCT+EPYIDAK+ +HIQK
Sbjct: 237 KFPSVLKAGHCHGGVATARLENQSALQDAAGLVSGAGNDSHCYCTIEPYIDAKFSVHIQK 296
Query: 63 IGTNYKAFMRKSISGNWKTNQGSAMLEAIGMNDRYKMWIDEVSEIFGGLEVCALELVVGK 122
IG NYKAFMRKSI+GNWKTNQGSAMLE I + ++YK W+DE+SE+FGG+EVC L +VV K
Sbjct: 297 IGNNYKAFMRKSITGNWKTNQGSAMLEQITLTEKYKSWVDEISELFGGMEVCGLSVVVAK 356
Query: 123 DGREHIIELNDSATSFMGDSQEEDRRNLAELVLQRMQAVCRPGLTKT 169
DGRE+II DS + +GD+QEEDRR +A+LV RMQ VCRP + +T
Sbjct: 357 DGREYIISACDSTFALIGDTQEEDRRQIADLVSGRMQNVCRPSMAQT 403
Score = 48.8 bits (111), Expect = 9e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 287 ALTEDAEDTMKNLRKTFAGIFGDM 310
++ EDAEDTMKNLRKTFAGIFGDM
Sbjct: 514 SVVEDAEDTMKNLRKTFAGIFGDM 537
>AE014297-1114|AAO41538.2| 981|Drosophila melanogaster CG3985-PF,
isoform F protein.
Length = 981
Score = 226 bits (552), Expect = 3e-59
Identities = 101/167 (60%), Positives = 129/167 (77%), Gaps = 4/167 (2%)
Query: 7 KFPVVIKIGHAHSGVAKVKVDSLADFQDIAGVVAMLGT----YCTVEPYIDAKYDIHIQK 62
KFP V+K GH H GVA ++++ + QD AG+V+ G YCT+EPYIDAK+ +HIQK
Sbjct: 237 KFPSVLKAGHCHGGVATARLENQSALQDAAGLVSGAGNDSHCYCTIEPYIDAKFSVHIQK 296
Query: 63 IGTNYKAFMRKSISGNWKTNQGSAMLEAIGMNDRYKMWIDEVSEIFGGLEVCALELVVGK 122
IG NYKAFMRKSI+GNWKTNQGSAMLE I + ++YK W+DE+SE+FGG+EVC L +VV K
Sbjct: 297 IGNNYKAFMRKSITGNWKTNQGSAMLEQITLTEKYKSWVDEISELFGGMEVCGLSVVVAK 356
Query: 123 DGREHIIELNDSATSFMGDSQEEDRRNLAELVLQRMQAVCRPGLTKT 169
DGRE+II DS + +GD+QEEDRR +A+LV RMQ VCRP + +T
Sbjct: 357 DGREYIISACDSTFALIGDTQEEDRRQIADLVSGRMQNVCRPSMAQT 403
Score = 48.8 bits (111), Expect = 9e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 287 ALTEDAEDTMKNLRKTFAGIFGDM 310
++ EDAEDTMKNLRKTFAGIFGDM
Sbjct: 514 SVVEDAEDTMKNLRKTFAGIFGDM 537
>AE014297-1113|AAN13463.2| 597|Drosophila melanogaster CG3985-PE,
isoform E protein.
Length = 597
Score = 226 bits (552), Expect = 3e-59
Identities = 101/167 (60%), Positives = 129/167 (77%), Gaps = 4/167 (2%)
Query: 7 KFPVVIKIGHAHSGVAKVKVDSLADFQDIAGVVAMLGT----YCTVEPYIDAKYDIHIQK 62
KFP V+K GH H GVA ++++ + QD AG+V+ G YCT+EPYIDAK+ +HIQK
Sbjct: 297 KFPSVLKAGHCHGGVATARLENQSALQDAAGLVSGAGNDSHCYCTIEPYIDAKFSVHIQK 356
Query: 63 IGTNYKAFMRKSISGNWKTNQGSAMLEAIGMNDRYKMWIDEVSEIFGGLEVCALELVVGK 122
IG NYKAFMRKSI+GNWKTNQGSAMLE I + ++YK W+DE+SE+FGG+EVC L +VV K
Sbjct: 357 IGNNYKAFMRKSITGNWKTNQGSAMLEQITLTEKYKSWVDEISELFGGMEVCGLSVVVAK 416
Query: 123 DGREHIIELNDSATSFMGDSQEEDRRNLAELVLQRMQAVCRPGLTKT 169
DGRE+II DS + +GD+QEEDRR +A+LV RMQ VCRP + +T
Sbjct: 417 DGREYIISACDSTFALIGDTQEEDRRQIADLVSGRMQNVCRPSMAQT 463
Score = 48.8 bits (111), Expect = 9e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 287 ALTEDAEDTMKNLRKTFAGIFGDM 310
++ EDAEDTMKNLRKTFAGIFGDM
Sbjct: 574 SVVEDAEDTMKNLRKTFAGIFGDM 597
>AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD,
isoform D protein.
Length = 1041
Score = 226 bits (552), Expect = 3e-59
Identities = 101/167 (60%), Positives = 129/167 (77%), Gaps = 4/167 (2%)
Query: 7 KFPVVIKIGHAHSGVAKVKVDSLADFQDIAGVVAMLGT----YCTVEPYIDAKYDIHIQK 62
KFP V+K GH H GVA ++++ + QD AG+V+ G YCT+EPYIDAK+ +HIQK
Sbjct: 297 KFPSVLKAGHCHGGVATARLENQSALQDAAGLVSGAGNDSHCYCTIEPYIDAKFSVHIQK 356
Query: 63 IGTNYKAFMRKSISGNWKTNQGSAMLEAIGMNDRYKMWIDEVSEIFGGLEVCALELVVGK 122
IG NYKAFMRKSI+GNWKTNQGSAMLE I + ++YK W+DE+SE+FGG+EVC L +VV K
Sbjct: 357 IGNNYKAFMRKSITGNWKTNQGSAMLEQITLTEKYKSWVDEISELFGGMEVCGLSVVVAK 416
Query: 123 DGREHIIELNDSATSFMGDSQEEDRRNLAELVLQRMQAVCRPGLTKT 169
DGRE+II DS + +GD+QEEDRR +A+LV RMQ VCRP + +T
Sbjct: 417 DGREYIISACDSTFALIGDTQEEDRRQIADLVSGRMQNVCRPSMAQT 463
Score = 48.8 bits (111), Expect = 9e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 287 ALTEDAEDTMKNLRKTFAGIFGDM 310
++ EDAEDTMKNLRKTFAGIFGDM
Sbjct: 574 SVVEDAEDTMKNLRKTFAGIFGDM 597
>X95453-2|CAA64723.1| 980|Drosophila melanogaster homologous to
synapsin I protein.
Length = 980
Score = 224 bits (547), Expect = 1e-58
Identities = 100/167 (59%), Positives = 129/167 (77%), Gaps = 4/167 (2%)
Query: 7 KFPVVIKIGHAHSGVAKVKVDSLADFQDIAGVVAMLGT----YCTVEPYIDAKYDIHIQK 62
KFP V+K GH H GVA ++++ + QD AG+V+ G YCT+EPYIDAK+ +HIQK
Sbjct: 237 KFPSVLKAGHCHGGVATARLENQSALQDAAGLVSGAGNDSHCYCTIEPYIDAKFSVHIQK 296
Query: 63 IGTNYKAFMRKSISGNWKTNQGSAMLEAIGMNDRYKMWIDEVSEIFGGLEVCALELVVGK 122
IG NYKAFMRKSI+GNWKTNQGSAMLE I + ++YK W+DE+SE+FGG+EVC L +VV K
Sbjct: 297 IGNNYKAFMRKSITGNWKTNQGSAMLEQITLTEKYKSWVDEISELFGGMEVCGLSVVVAK 356
Query: 123 DGREHIIELNDSATSFMGDSQEEDRRNLAELVLQRMQAVCRPGLTKT 169
DGRE+II +S + +GD+QEEDRR +A+LV RMQ VCRP + +T
Sbjct: 357 DGREYIISACNSTFALIGDTQEEDRRQIADLVSGRMQNVCRPSMAQT 403
Score = 48.8 bits (111), Expect = 9e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 287 ALTEDAEDTMKNLRKTFAGIFGDM 310
++ EDAEDTMKNLRKTFAGIFGDM
Sbjct: 514 SVVEDAEDTMKNLRKTFAGIFGDM 537
>X95453-1|CAA64722.1| 537|Drosophila melanogaster homologous to
synapsin I protein.
Length = 537
Score = 224 bits (547), Expect = 1e-58
Identities = 100/167 (59%), Positives = 129/167 (77%), Gaps = 4/167 (2%)
Query: 7 KFPVVIKIGHAHSGVAKVKVDSLADFQDIAGVVAMLGT----YCTVEPYIDAKYDIHIQK 62
KFP V+K GH H GVA ++++ + QD AG+V+ G YCT+EPYIDAK+ +HIQK
Sbjct: 237 KFPSVLKAGHCHGGVATARLENQSALQDAAGLVSGAGNDSHCYCTIEPYIDAKFSVHIQK 296
Query: 63 IGTNYKAFMRKSISGNWKTNQGSAMLEAIGMNDRYKMWIDEVSEIFGGLEVCALELVVGK 122
IG NYKAFMRKSI+GNWKTNQGSAMLE I + ++YK W+DE+SE+FGG+EVC L +VV K
Sbjct: 297 IGNNYKAFMRKSITGNWKTNQGSAMLEQITLTEKYKSWVDEISELFGGMEVCGLSVVVAK 356
Query: 123 DGREHIIELNDSATSFMGDSQEEDRRNLAELVLQRMQAVCRPGLTKT 169
DGRE+II +S + +GD+QEEDRR +A+LV RMQ VCRP + +T
Sbjct: 357 DGREYIISACNSTFALIGDTQEEDRRQIADLVSGRMQNVCRPSMAQT 403
Score = 48.8 bits (111), Expect = 9e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 287 ALTEDAEDTMKNLRKTFAGIFGDM 310
++ EDAEDTMKNLRKTFAGIFGDM
Sbjct: 514 SVVEDAEDTMKNLRKTFAGIFGDM 537
>AE014297-1116|AAN13464.2| 488|Drosophila melanogaster CG3985-PC,
isoform C protein.
Length = 488
Score = 213 bits (521), Expect = 2e-55
Identities = 96/157 (61%), Positives = 122/157 (77%), Gaps = 4/157 (2%)
Query: 7 KFPVVIKIGHAHSGVAKVKVDSLADFQDIAGVVAMLGT----YCTVEPYIDAKYDIHIQK 62
KFP V+K GH H GVA ++++ + QD AG+V+ G YCT+EPYIDAK+ +HIQK
Sbjct: 237 KFPSVLKAGHCHGGVATARLENQSALQDAAGLVSGAGNDSHCYCTIEPYIDAKFSVHIQK 296
Query: 63 IGTNYKAFMRKSISGNWKTNQGSAMLEAIGMNDRYKMWIDEVSEIFGGLEVCALELVVGK 122
IG NYKAFMRKSI+GNWKTNQGSAMLE I + ++YK W+DE+SE+FGG+EVC L +VV K
Sbjct: 297 IGNNYKAFMRKSITGNWKTNQGSAMLEQITLTEKYKSWVDEISELFGGMEVCGLSVVVAK 356
Query: 123 DGREHIIELNDSATSFMGDSQEEDRRNLAELVLQRMQ 159
DGRE+II DS + +GD+QEEDRR +A+LV RMQ
Sbjct: 357 DGREYIISACDSTFALIGDTQEEDRRQIADLVSGRMQ 393
>X95454-1|CAA64724.1| 388|Drosophila melanogaster homologous to
synapsin II protein.
Length = 388
Score = 211 bits (516), Expect = 8e-55
Identities = 95/157 (60%), Positives = 122/157 (77%), Gaps = 4/157 (2%)
Query: 7 KFPVVIKIGHAHSGVAKVKVDSLADFQDIAGVVAMLGT----YCTVEPYIDAKYDIHIQK 62
KFP V+K GH H GVA ++++ + QD AG+V+ G YCT+EPYIDAK+ +HIQK
Sbjct: 137 KFPSVLKAGHCHGGVATARLENQSALQDAAGLVSGAGNDSHCYCTIEPYIDAKFSVHIQK 196
Query: 63 IGTNYKAFMRKSISGNWKTNQGSAMLEAIGMNDRYKMWIDEVSEIFGGLEVCALELVVGK 122
IG NYKAFMRKSI+GNWKTNQGSAMLE I + ++YK W+DE+SE+FGG+EVC L +VV K
Sbjct: 197 IGNNYKAFMRKSITGNWKTNQGSAMLEQITLTEKYKSWVDEISELFGGMEVCGLSVVVAK 256
Query: 123 DGREHIIELNDSATSFMGDSQEEDRRNLAELVLQRMQ 159
DGRE+II +S + +GD+QEEDRR +A+LV RMQ
Sbjct: 257 DGREYIISACNSTFALIGDTQEEDRRQIADLVSGRMQ 293
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.319 0.135 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,507,617
Number of Sequences: 52641
Number of extensions: 315857
Number of successful extensions: 745
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 720
Number of HSP's gapped (non-prelim): 16
length of query: 310
length of database: 24,830,863
effective HSP length: 85
effective length of query: 225
effective length of database: 20,356,378
effective search space: 4580185050
effective search space used: 4580185050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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