Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000308-TA|BGIBMGA000308-PA|IPR001359|Synapsin
(338 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D573D8 Cluster: PREDICTED: similar to CG3985-PE,... 262 7e-69
UniRef50_Q24546 Cluster: Synapsin [Contains: Synapsin-1 (Syn1) (... 225 2e-57
UniRef50_Q964P6 Cluster: Synapsin isoform 8.2; n=7; Mollusca|Rep... 171 2e-41
UniRef50_Q9PUD9 Cluster: Synapsin Ia; n=3; Lampetra fluviatilis|... 137 4e-31
UniRef50_P17600 Cluster: Synapsin-1; n=29; Vertebrata|Rep: Synap... 131 3e-29
UniRef50_O14994 Cluster: Synapsin-3; n=31; Tetrapoda|Rep: Synaps... 128 2e-28
UniRef50_A7S9R2 Cluster: Predicted protein; n=1; Nematostella ve... 126 8e-28
UniRef50_Q92777 Cluster: Synapsin-2; n=23; cellular organisms|Re... 122 2e-26
UniRef50_Q4SSS6 Cluster: Chromosome undetermined SCAF14347, whol... 112 1e-23
UniRef50_UPI0000E4862A Cluster: PREDICTED: similar to synapsin i... 109 1e-22
UniRef50_Q8CE19 Cluster: 0 day neonate head cDNA, RIKEN full-len... 90 7e-17
UniRef50_UPI00015A69EC Cluster: UPI00015A69EC related cluster; n... 81 4e-14
UniRef50_UPI00004985EB Cluster: synapsin; n=1; Entamoeba histoly... 68 4e-10
UniRef50_Q8MXU3 Cluster: Synapsin protein 1, isoform b; n=3; Cae... 47 8e-04
UniRef50_P54296 Cluster: Myomesin-2; n=33; Euteleostomi|Rep: Myo... 37 0.65
UniRef50_Q3ME76 Cluster: Sensor protein; n=1; Anabaena variabili... 36 2.0
UniRef50_Q6DN44 Cluster: Hypoxia-inducible factor 1 alpha; n=1; ... 35 2.6
UniRef50_UPI0000E2141B Cluster: PREDICTED: similar to homeobox A... 34 6.1
UniRef50_Q0IFF6 Cluster: Harmonin, putative; n=2; Culicidae|Rep:... 34 6.1
UniRef50_Q7S4M7 Cluster: Predicted protein; n=1; Neurospora cras... 34 6.1
>UniRef50_UPI0000D573D8 Cluster: PREDICTED: similar to CG3985-PE,
isoform E; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG3985-PE, isoform E - Tribolium castaneum
Length = 569
Score = 262 bits (643), Expect = 7e-69
Identities = 148/285 (51%), Positives = 188/285 (65%), Gaps = 33/285 (11%)
Query: 56 RRFSSGDLQSECDEGE--VDPYTGRAATTSQPKPQAQKPTSQATXXXXXXXXXXXXXXXX 113
RRFSSGDL SEC++GE VDPY+ T+QP+ P SQ +
Sbjct: 50 RRFSSGDLSSECEDGEAPVDPYSKAPPVTAQPQAPPPPPPSQTSTVGDLSL--------- 100
Query: 114 XXXXXXXXXNLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSVASVG 173
NLR GS+ TSAPSSPAKSRESLLQRVQSLTG ARDQGA++LG+ S A+
Sbjct: 101 ---------NLRPGSKTTSAPSSPAKSRESLLQRVQSLTGQARDQGASILGAAVSSATRV 151
Query: 174 RGYNRDRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSREYNL 233
R +TLLVVDDQNTDWSKYFRG+R+ G++DIRVEQAEF+ + VT +S N+
Sbjct: 152 TSSVSGRYLTLLVVDDQNTDWSKYFRGKRI-GDYDIRVEQAEFKE---ITVTANSEGANV 207
Query: 234 RIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDAGADHRALLLGLKFGGVPSINSL 293
+ + + T RV PDF+LVRQN++DAG +++ LLL LKFGGVPSIN+L
Sbjct: 208 SMA------VFRGGT---RVGRSFRPDFLLVRQNLKDAGENYKKLLLALKFGGVPSINNL 258
Query: 294 NSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
NSIY+FQD+PWVFGH G+++FPLIEQT+Y NH +M+++
Sbjct: 259 NSIYNFQDKPWVFGHLVQLQRRLGKDSFPLIEQTFYPNHREMITA 303
>UniRef50_Q24546 Cluster: Synapsin [Contains: Synapsin-1 (Syn1)
(Syn1-S); Synapsin-2 (Syn2)]; n=14; Endopterygota|Rep:
Synapsin [Contains: Synapsin-1 (Syn1) (Syn1-S);
Synapsin-2 (Syn2)] - Drosophila melanogaster (Fruit fly)
Length = 1025
Score = 225 bits (549), Expect = 2e-57
Identities = 131/285 (45%), Positives = 159/285 (55%), Gaps = 16/285 (5%)
Query: 56 RRFSSGDLQSECDEGEVD--PYTGRAATTSQPKPQAQ--KPTSQATXXXXXXXXXXXXXX 111
R FSSGDL SE D+ + + P R KP P
Sbjct: 3 RGFSSGDLSSEVDDVDPNSLPPAARPIQDQPTKPPVAGGPPNMPPPPAPGQPAGAAPELS 62
Query: 112 XXXXXXXXXXXNLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGS-VTSVA 170
RG SAP+SPAKSRESLLQRVQSLTGAARDQGA++LG+ V S
Sbjct: 63 LSFGAGKTPATAAPAPPRGVSAPTSPAKSRESLLQRVQSLTGAARDQGASILGAAVQSAT 122
Query: 171 SVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSRE 230
+++D+ TLLV+DDQNTDWSKYFRGRRL G++DIRVEQAEFR +V
Sbjct: 123 QRAPAFSKDKYFTLLVLDDQNTDWSKYFRGRRLHGDFDIRVEQAEFRDITVVSSADTGPV 182
Query: 231 YNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDAGADHRALLLGLKFGGVPSI 290
+ R RV PDFVL+RQ RD +D+R+ +LGLK+GGVPSI
Sbjct: 183 VTMAAYR-----------SGTRVARSFRPDFVLIRQPPRDGSSDYRSTILGLKYGGVPSI 231
Query: 291 NSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDM 335
NSL+SIY FQD+PWVF H GR+ FPLIEQT++ N D+
Sbjct: 232 NSLHSIYQFQDKPWVFSHLLQLQRRLGRDGFPLIEQTFFPNPRDL 276
>UniRef50_Q964P6 Cluster: Synapsin isoform 8.2; n=7; Mollusca|Rep:
Synapsin isoform 8.2 - Aplysia californica (California
sea hare)
Length = 513
Score = 171 bits (416), Expect = 2e-41
Identities = 97/216 (44%), Positives = 129/216 (59%), Gaps = 25/216 (11%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCV 182
N R G SAP+SP+KS S + G L S +S +S YN+DRC
Sbjct: 43 NFRKGP-SPSAPNSPSKSASSA------------NLGQRLFSSSSS-SSGKPSYNKDRCK 88
Query: 183 TLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFE 242
TLLV+DDQ+TDWSKYFRG++L G+WD+RVEQAEF + + ++ +
Sbjct: 89 TLLVIDDQHTDWSKYFRGKKLFGDWDVRVEQAEFSELNLAAYSDSGTMVDI--------Q 140
Query: 243 ITKNPTPTKRVDTRQWPDFVLVRQNVRDAGADHRALLLGLKFGGVPSINSLNSIYHFQDR 302
+T+N T R PDFVL+RQ+VRDA D R LLLG K+G +PS+NSL + Y+F D+
Sbjct: 141 VTRNGTKVVRSFK---PDFVLIRQHVRDAHEDWRNLLLGFKYGAIPSVNSLTAEYNFLDK 197
Query: 303 PWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
PWVF G+E+FPLI+Q YY NH +MVS+
Sbjct: 198 PWVFAQLIEIQKRLGKESFPLIDQAYYPNHKEMVSN 233
Score = 33.5 bits (73), Expect = 8.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 56 RRFSSGDLQSECDEGEVDPYTGRAATTSQPKPQAQKPTSQA 96
RRFSSGDLQ E + + P G P P A S++
Sbjct: 19 RRFSSGDLQGEASDNDDSPNVGGLNFRKGPSPSAPNSPSKS 59
>UniRef50_Q9PUD9 Cluster: Synapsin Ia; n=3; Lampetra
fluviatilis|Rep: Synapsin Ia - Lampetra fluviatilis
(River lamprey)
Length = 687
Score = 137 bits (331), Expect = 4e-31
Identities = 76/193 (39%), Positives = 115/193 (59%), Gaps = 13/193 (6%)
Query: 148 VQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRRLPGEW 207
+ SL+ A R A G V A G + LLV+DDQ TDW+K+FRG+++ GE+
Sbjct: 129 LSSLSNAVRQTTAAAAGLVEQTAGSVSGSAGRKSKVLLVIDDQQTDWAKFFRGKKVLGEY 188
Query: 208 DIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQN 267
D++VEQAEF + ++++ R + TK V + + PDFVLVRQ
Sbjct: 189 DVKVEQAEFSELNLAAYVDGGCTVDMQLYR----------SGTKVVRSLK-PDFVLVRQP 237
Query: 268 VRD-AGA-DHRALLLGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIE 325
AG+ D+R++++GL++GGVP++NSL+S+Y+F +PWVF G E FPLIE
Sbjct: 238 AYSMAGSQDYRSIVIGLQYGGVPTLNSLHSVYNFCSKPWVFSQLIRIQKSLGAEKFPLIE 297
Query: 326 QTYYHNHTDMVSS 338
QTY+ NH +M+++
Sbjct: 298 QTYFPNHREMLTT 310
>UniRef50_P17600 Cluster: Synapsin-1; n=29; Vertebrata|Rep:
Synapsin-1 - Homo sapiens (Human)
Length = 705
Score = 131 bits (316), Expect = 3e-29
Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 17/198 (8%)
Query: 143 SLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRR 202
SL V+ T AA + +G + A GRG R LLV+D+ +TDW+KYF+G++
Sbjct: 79 SLSNAVKQTTAAAAATFSEQVGGGSGGA--GRGGAASR--VLLVIDEPHTDWAKYFKGKK 134
Query: 203 LPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFV 262
+ GE DI+VEQAEF +V ++ E+ +N R PDFV
Sbjct: 135 IHGEIDIKVEQAEFSDLNLVAHANGGFSVDM--------EVLRNGVKVVR---SLKPDFV 183
Query: 263 LVRQNVRDAG--ADHRALLLGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXXGREN 320
L+RQ+ D+R+L++GL++ G+PS+NSL+S+Y+F D+PWVF G E
Sbjct: 184 LIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEE 243
Query: 321 FPLIEQTYYHNHTDMVSS 338
FPLI+QT+Y NH +M+SS
Sbjct: 244 FPLIDQTFYPNHKEMLSS 261
>UniRef50_O14994 Cluster: Synapsin-3; n=31; Tetrapoda|Rep:
Synapsin-3 - Homo sapiens (Human)
Length = 580
Score = 128 bits (310), Expect = 2e-28
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>UniRef50_A7S9R2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 357
Score = 126 bits (304), Expect = 8e-28
Identities = 75/178 (42%), Positives = 102/178 (57%), Gaps = 16/178 (8%)
Query: 164 GSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRRLP-GEWDIRVEQAEFRLFLIV 222
GS ++ ++ TLL++D + DWSK F+GR L G + IRVEQAEF +
Sbjct: 8 GSKEDISKTKSPESKKLTKTLLIIDSADHDWSKIFKGRNLHNGSYGIRVEQAEFADINLA 67
Query: 223 EVTLDSREYNLRIKRPYKFEITKNPTPTKRVDTRQW-PDFVLVRQNVRDAGA--DHRALL 279
+ ++++ R E T V R + PDFVLVRQ++R G D+R +L
Sbjct: 68 SYSDSGTMVDIQVFR----EGT--------VVVRSFRPDFVLVRQSIRGIGPREDYRHIL 115
Query: 280 LGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVS 337
LGL+FG VPS+NSL SIY+F ++PWVF G+E FPLIEQ YY NH +MVS
Sbjct: 116 LGLQFGNVPSVNSLESIYNFAEKPWVFSQLIQIKKRLGKEEFPLIEQAYYPNHKEMVS 173
>UniRef50_Q92777 Cluster: Synapsin-2; n=23; cellular organisms|Rep:
Synapsin-2 - Homo sapiens (Human)
Length = 582
Score = 122 bits (293), Expect = 2e-26
Identities = 66/156 (42%), Positives = 96/156 (61%), Gaps = 13/156 (8%)
Query: 184 LLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEI 243
LLVVD+ + DW+K FRG+++ G++DI+VEQAEF +V + ++++ R
Sbjct: 116 LLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLR------ 169
Query: 244 TKNPTPTKRVDTRQWPDFVLVRQNV--RDAGADHRALLLGLKFGGVPSINSLNSIYHFQD 301
TK V + + PDFVL+RQ+ D R L++G+++ G+PSINSL SIY+F D
Sbjct: 170 ----NGTKVVRSFR-PDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCD 224
Query: 302 RPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVS 337
+PWVF G E FPLIEQTYY NH +M++
Sbjct: 225 KPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLT 260
>UniRef50_Q4SSS6 Cluster: Chromosome undetermined SCAF14347, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14347,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 316
Score = 112 bits (269), Expect = 1e-23
Identities = 75/185 (40%), Positives = 98/185 (52%), Gaps = 17/185 (9%)
Query: 127 GSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCV---- 182
GS S+P S S S+++ Q A A A G V
Sbjct: 61 GSGSASSPGSFLSSFSSVVKSAQMAQNVAAAAHAKSAAMAAEGAQTGSSQPPKPAVRKPK 120
Query: 183 TLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFE 242
LLV+DDQ+TDW+KYFRG++L GE++IRVEQAEF E+ L S + +
Sbjct: 121 VLLVIDDQHTDWAKYFRGKKLNGEFEIRVEQAEFS-----EINLAS-----YVNSGCTVD 170
Query: 243 ITKNPTPTKRVDTRQWPDFVLVRQNVRD--AGADHRALLLGLKFGGVPSINSLNSIYHFQ 300
+ N TK V + + PDFVL+RQ+ G D R L++GL FGGVPSINSL SIY+F
Sbjct: 171 MQVNKGGTKAVRSFK-PDFVLIRQHAYSMIPGEDFRNLVIGLHFGGVPSINSLYSIYNFC 229
Query: 301 DRPWV 305
+PWV
Sbjct: 230 SKPWV 234
Score = 33.5 bits (73), Expect = 8.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 317 GRENFPLIEQTYYHNHTDMVSS 338
G E FPL EQ +Y NHT MVS+
Sbjct: 274 GPEKFPLNEQCFYPNHTQMVST 295
>UniRef50_UPI0000E4862A Cluster: PREDICTED: similar to synapsin
isoform 11.1; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to synapsin isoform 11.1 -
Strongylocentrotus purpuratus
Length = 237
Score = 109 bits (262), Expect = 1e-22
Identities = 65/177 (36%), Positives = 99/177 (55%), Gaps = 19/177 (10%)
Query: 161 NLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFL 220
N +G ++S+A N+ TLLV+DD +TDW+KYFRG+ + GE++IRVEQ EF
Sbjct: 50 NSMGFLSSLAPRQEKGNQK---TLLVIDDLHTDWAKYFRGKLIHGEYEIRVEQCEFSELN 106
Query: 221 IVEVTLDSREYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVR--DAGADHRAL 278
+ + ++R R +RV PD+VLVRQ+ R + D R L
Sbjct: 107 LASYSDAGVTVDMRGIRQ-----------GQRVVRTFKPDYVLVRQHARSMEVQEDWRNL 155
Query: 279 LLGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDM 335
++G ++G VPS+NS +Y+F D+PWV G+E FPL++Q ++ NH +M
Sbjct: 156 VIGFQYGNVPSLNSWQVVYNFMDKPWVL---TTRQEKLGKEKFPLVDQAFFPNHREM 209
>UniRef50_Q8CE19 Cluster: 0 day neonate head cDNA, RIKEN full-length
enriched library, clone:4831410C22 product:synapsin II,
full insert sequence; n=29; Euteleostomi|Rep: 0 day
neonate head cDNA, RIKEN full-length enriched library,
clone:4831410C22 product:synapsin II, full insert
sequence - Mus musculus (Mouse)
Length = 313
Score = 90.2 bits (214), Expect = 7e-17
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 259 PDFVLVRQNV--RDAGADHRALLLGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXX 316
PDFVL+RQ+ D R L++G+++ G+PSINSL SIY+F D+PWVF
Sbjct: 15 PDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSINSLESIYNFCDKPWVFAQMVAIFKTL 74
Query: 317 GRENFPLIEQTYYHNHTDMVS 337
G E FPLIEQTYY NH +M++
Sbjct: 75 GGEKFPLIEQTYYPNHREMLT 95
>UniRef50_UPI00015A69EC Cluster: UPI00015A69EC related cluster; n=1;
Danio rerio|Rep: UPI00015A69EC UniRef100 entry - Danio
rerio
Length = 261
Score = 81.0 bits (191), Expect = 4e-14
Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 132 SAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQN 191
+AP PA S V++ A+ Q + T VA+ + R LLV+D+
Sbjct: 69 AAPPGPAGFLSSFSSVVKTAQIASAVQAK--ASAHTDVAAPKPAARKPR--VLLVIDEPQ 124
Query: 192 TDWSKYFRGRRLPGEWDIRVEQAEFRL--FLIVEVTLDSREYNLRIKRPYKFEITKNPTP 249
TDWS + G I+V+QAE FLI+ +L + I N
Sbjct: 125 TDWSSLCGPELIRGRSQIKVKQAEILQISFLILRTSLSKTDCL----------ICSNNNN 174
Query: 250 TKRVDTRQWPDFVLVRQNVRDAGADHRA-LLLGLKFGGVPSINSLNSIYHFQDRPWVFGH 308
+ + + ++N + D + +GL +G +PS+N+L SIY+F +PWVF H
Sbjct: 175 NNNNNNNN--NCIYNQRNAQIGQPDTAEHVXIGLHYGSIPSVNTLFSIYNFCSKPWVFSH 232
Query: 309 XXXXXXXXGRENFPLIEQTYYHNHTDMVS 337
G E FPL EQT++ NHT MVS
Sbjct: 233 MIKLYQTLGPEKFPLNEQTFFPNHTQMVS 261
>UniRef50_UPI00004985EB Cluster: synapsin; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: synapsin - Entamoeba
histolytica HM-1:IMSS
Length = 314
Score = 67.7 bits (158), Expect = 4e-10
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 184 LLVVDDQNT-DWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFE 242
LLV+ + T +W K F+ + G + I VE F ++ + +T S + P K+
Sbjct: 9 LLVIGGRPTINWYKLFKNTSI-GNYSIEVE---FTMWDEMVLTSYSDSGCIISIMPSKYA 64
Query: 243 ITKNPTPTKRVDTRQWPDFVLVRQNVRDA-GADHRALLLGLKFGGVPSINSLNSIYHFQD 301
I P T+R T Q PDF+L+R + G D + LLGL + G+PSINSL S+Y +
Sbjct: 65 IPDTPMNTRR--TFQ-PDFLLIRGACQGVYGQDWKNELLGLMYCGIPSINSLESLYMCLE 121
Query: 302 RPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDM 335
+P ++ +E FPLI QTYY + + M
Sbjct: 122 KPVIYSKLLQIHKQY-KEKFPLIPQTYYPSWSSM 154
>UniRef50_Q8MXU3 Cluster: Synapsin protein 1, isoform b; n=3;
Caenorhabditis|Rep: Synapsin protein 1, isoform b -
Caenorhabditis elegans
Length = 474
Score = 46.8 bits (106), Expect = 8e-04
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 18/88 (20%)
Query: 128 SRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVV 187
S SAP+SPAKSRESL ++ R +G L+ +D V LLV+
Sbjct: 39 SNTISAPTSPAKSRESLAAALERSLNHDRSRGEPLM--------------KDAKV-LLVI 83
Query: 188 DDQNTDWSKYFRGRRLPGEWDIRVEQAE 215
D + DWSKYFR E+ IRVEQ +
Sbjct: 84 DSHHVDWSKYFRNHT---EYAIRVEQGD 108
>UniRef50_P54296 Cluster: Myomesin-2; n=33; Euteleostomi|Rep:
Myomesin-2 - Homo sapiens (Human)
Length = 1465
Score = 37.1 bits (82), Expect = 0.65
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 146 QRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRRLPG 205
Q+ ++ A +++G L+G + V ++ G + T+ D W K + +L
Sbjct: 1331 QQFKAAAFAEKNRG-RLIGGLPDVVTIMEGKTLNLTCTVFGNPDPEVIWFKNDQDIQLSE 1389
Query: 206 EWDIRVEQAEFRLFLIVEVTL-DSREYNLRIKRPY 239
+ ++VEQA++ I VT DS +Y++ IK Y
Sbjct: 1390 HFSVKVEQAKYVSMTIKGVTSEDSGKYSINIKNKY 1424
>UniRef50_Q3ME76 Cluster: Sensor protein; n=1; Anabaena variabilis
ATCC 29413|Rep: Sensor protein - Anabaena variabilis
(strain ATCC 29413 / PCC 7937)
Length = 1431
Score = 35.5 bits (78), Expect = 2.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 148 VQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKY 197
V+ + DQ A+++GS SV S+ G N + ++ + + D+ T W Y
Sbjct: 890 VEQVLQVITDQAASIIGSHQSVTSMTIGQNWSQAISAIFLSDKYTQWQNY 939
>UniRef50_Q6DN44 Cluster: Hypoxia-inducible factor 1 alpha; n=1;
Palaemonetes pugio|Rep: Hypoxia-inducible factor 1 alpha
- Palaemonetes pugio
Length = 1057
Score = 35.1 bits (77), Expect = 2.6
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 126 GGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLL 185
GG G SAP S K ++S+L+ + +L G D A+ G V A+ R +DR +L
Sbjct: 880 GGGGGLSAPLSLHKGKDSVLRNLLNLNGEIED--ASREGEVQVFAAPIR-LTQDRMTAML 936
Query: 186 VVDDQNTDWSKYFRGRRLPG 205
+ DD ++ S Y + R L G
Sbjct: 937 LADDGSSHLS-YPKLRILTG 955
>UniRef50_UPI0000E2141B Cluster: PREDICTED: similar to homeobox A6;
n=1; Pan troglodytes|Rep: PREDICTED: similar to homeobox
A6 - Pan troglodytes
Length = 447
Score = 33.9 bits (74), Expect = 6.1
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 153 GAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRRLP 204
GAAR++ ++L +V ++V R R +C + + + ++D K RGRRLP
Sbjct: 34 GAAREEAQSVLLAVALRSAVARTVGRPKCTSDQICPENSSDSDKK-RGRRLP 84
>UniRef50_Q0IFF6 Cluster: Harmonin, putative; n=2; Culicidae|Rep:
Harmonin, putative - Aedes aegypti (Yellowfever
mosquito)
Length = 843
Score = 33.9 bits (74), Expect = 6.1
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 138 AKSRESLLQRVQSLTGAARDQGANLLGSVTSVASVGRG 175
++SRE L++R+Q G +DQGA L S ++V +V G
Sbjct: 792 SESREDLVERIQIGCGQQQDQGAKLSRSSSAVTTVSNG 829
>UniRef50_Q7S4M7 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 573
Score = 33.9 bits (74), Expect = 6.1
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 125 RGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSVASVGRG 175
+GG S+PSS ++S+ + QS + QG N GS TS S RG
Sbjct: 454 QGGRESQSSPSSQSQSQSQSQSQSQSQRQSQGSQGYNSQGSATSSQSQSRG 504
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,148,109
Number of Sequences: 1657284
Number of extensions: 11212772
Number of successful extensions: 26175
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 26129
Number of HSP's gapped (non-prelim): 30
length of query: 338
length of database: 575,637,011
effective HSP length: 101
effective length of query: 237
effective length of database: 408,251,327
effective search space: 96755564499
effective search space used: 96755564499
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 73 (33.5 bits)
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