Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000308-TA|BGIBMGA000308-PA|IPR001359|Synapsin
(338 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84466-2|CAI42462.1| 705|Homo sapiens synapsin I protein. 131 4e-30
Z84466-1|CAI42461.1| 669|Homo sapiens synapsin I protein. 131 4e-30
AL009172-2|CAI42446.1| 705|Homo sapiens synapsin I protein. 131 4e-30
AL009172-1|CAI42445.1| 669|Homo sapiens synapsin I protein. 131 4e-30
Z98256-3|CAB10915.2| 580|Homo sapiens synapsin III protein. 128 2e-29
Z83846-2|CAB62947.2| 580|Homo sapiens SYN3 protein. 128 2e-29
Z82246-1|CAI18775.1| 580|Homo sapiens synapsin III protein. 128 2e-29
Z82181-1|CAI18771.1| 580|Homo sapiens synapsin III protein. 128 2e-29
Z80902-1|CAI18794.1| 580|Homo sapiens synapsin III protein. 128 2e-29
Z71183-1|CAB63144.2| 580|Homo sapiens synapsin III protein. 128 2e-29
CR456589-1|CAG30475.1| 580|Homo sapiens SYN3 protein. 128 2e-29
BC075066-1|AAH75066.1| 580|Homo sapiens synapsin III protein. 128 2e-29
BC075065-1|AAH75065.1| 580|Homo sapiens synapsin III, isoform I... 128 2e-29
AF046873-1|AAC15101.1| 580|Homo sapiens synapsin IIIa protein. 128 2e-29
M58378-2|AAC41931.1| 670|Homo sapiens synapsin Ib protein. 128 3e-29
M58378-1|AAC41930.1| 705|Homo sapiens synapsin I protein. 128 3e-29
BC117460-1|AAI17461.1| 579|Homo sapiens synapsin III protein. 126 1e-28
AB209684-1|BAD92921.1| 611|Homo sapiens Synapsin-3 variant prot... 126 1e-28
U40215-1|AAC50718.1| 478|Homo sapiens synapsin IIb protein. 122 1e-27
BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein. 122 2e-27
AF077737-1|AAC33789.1| 478|Homo sapiens synapsin IIb protein. 122 2e-27
AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein. 122 2e-27
AB209088-1|BAD92325.1| 514|Homo sapiens synapsin II isoform IIb... 122 2e-27
Z83846-1|CAI95433.1| 113|Homo sapiens SYN3 protein. 38 0.051
X69089-1|CAA48832.1| 1465|Homo sapiens 165kD protein protein. 37 0.088
BC052969-1|AAH52969.1| 1465|Homo sapiens myomesin (M-protein) 2,... 37 0.088
U77718-1|AAB48304.1| 743|Homo sapiens pinin protein. 33 1.9
BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome associ... 32 3.3
AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome associ... 32 3.3
AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein. 32 3.3
Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3 prot... 31 4.4
AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3 pr... 31 4.4
Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein. 31 7.7
>Z84466-2|CAI42462.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 131 bits (316), Expect = 4e-30
Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 17/198 (8%)
Query: 143 SLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRR 202
SL V+ T AA + +G + A GRG R LLV+D+ +TDW+KYF+G++
Sbjct: 79 SLSNAVKQTTAAAAATFSEQVGGGSGGA--GRGGAASR--VLLVIDEPHTDWAKYFKGKK 134
Query: 203 LPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFV 262
+ GE DI+VEQAEF +V ++ E+ +N R PDFV
Sbjct: 135 IHGEIDIKVEQAEFSDLNLVAHANGGFSVDM--------EVLRNGVKVVR---SLKPDFV 183
Query: 263 LVRQNVRDAG--ADHRALLLGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXXGREN 320
L+RQ+ D+R+L++GL++ G+PS+NSL+S+Y+F D+PWVF G E
Sbjct: 184 LIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEE 243
Query: 321 FPLIEQTYYHNHTDMVSS 338
FPLI+QT+Y NH +M+SS
Sbjct: 244 FPLIDQTFYPNHKEMLSS 261
>Z84466-1|CAI42461.1| 669|Homo sapiens synapsin I protein.
Length = 669
Score = 131 bits (316), Expect = 4e-30
Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 17/198 (8%)
Query: 143 SLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRR 202
SL V+ T AA + +G + A GRG R LLV+D+ +TDW+KYF+G++
Sbjct: 79 SLSNAVKQTTAAAAATFSEQVGGGSGGA--GRGGAASR--VLLVIDEPHTDWAKYFKGKK 134
Query: 203 LPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFV 262
+ GE DI+VEQAEF +V ++ E+ +N R PDFV
Sbjct: 135 IHGEIDIKVEQAEFSDLNLVAHANGGFSVDM--------EVLRNGVKVVR---SLKPDFV 183
Query: 263 LVRQNVRDAG--ADHRALLLGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXXGREN 320
L+RQ+ D+R+L++GL++ G+PS+NSL+S+Y+F D+PWVF G E
Sbjct: 184 LIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEE 243
Query: 321 FPLIEQTYYHNHTDMVSS 338
FPLI+QT+Y NH +M+SS
Sbjct: 244 FPLIDQTFYPNHKEMLSS 261
>AL009172-2|CAI42446.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 131 bits (316), Expect = 4e-30
Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 17/198 (8%)
Query: 143 SLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRR 202
SL V+ T AA + +G + A GRG R LLV+D+ +TDW+KYF+G++
Sbjct: 79 SLSNAVKQTTAAAAATFSEQVGGGSGGA--GRGGAASR--VLLVIDEPHTDWAKYFKGKK 134
Query: 203 LPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFV 262
+ GE DI+VEQAEF +V ++ E+ +N R PDFV
Sbjct: 135 IHGEIDIKVEQAEFSDLNLVAHANGGFSVDM--------EVLRNGVKVVR---SLKPDFV 183
Query: 263 LVRQNVRDAG--ADHRALLLGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXXGREN 320
L+RQ+ D+R+L++GL++ G+PS+NSL+S+Y+F D+PWVF G E
Sbjct: 184 LIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEE 243
Query: 321 FPLIEQTYYHNHTDMVSS 338
FPLI+QT+Y NH +M+SS
Sbjct: 244 FPLIDQTFYPNHKEMLSS 261
>AL009172-1|CAI42445.1| 669|Homo sapiens synapsin I protein.
Length = 669
Score = 131 bits (316), Expect = 4e-30
Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 17/198 (8%)
Query: 143 SLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRR 202
SL V+ T AA + +G + A GRG R LLV+D+ +TDW+KYF+G++
Sbjct: 79 SLSNAVKQTTAAAAATFSEQVGGGSGGA--GRGGAASR--VLLVIDEPHTDWAKYFKGKK 134
Query: 203 LPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFV 262
+ GE DI+VEQAEF +V ++ E+ +N R PDFV
Sbjct: 135 IHGEIDIKVEQAEFSDLNLVAHANGGFSVDM--------EVLRNGVKVVR---SLKPDFV 183
Query: 263 LVRQNVRDAG--ADHRALLLGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXXGREN 320
L+RQ+ D+R+L++GL++ G+PS+NSL+S+Y+F D+PWVF G E
Sbjct: 184 LIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEE 243
Query: 321 FPLIEQTYYHNHTDMVSS 338
FPLI+QT+Y NH +M+SS
Sbjct: 244 FPLIDQTFYPNHKEMLSS 261
>Z98256-3|CAB10915.2| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 128 bits (310), Expect = 2e-29
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>Z83846-2|CAB62947.2| 580|Homo sapiens SYN3 protein.
Length = 580
Score = 128 bits (310), Expect = 2e-29
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>Z82246-1|CAI18775.1| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 128 bits (310), Expect = 2e-29
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>Z82181-1|CAI18771.1| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 128 bits (310), Expect = 2e-29
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>Z80902-1|CAI18794.1| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 128 bits (310), Expect = 2e-29
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>Z71183-1|CAB63144.2| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 128 bits (310), Expect = 2e-29
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>CR456589-1|CAG30475.1| 580|Homo sapiens SYN3 protein.
Length = 580
Score = 128 bits (310), Expect = 2e-29
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>BC075066-1|AAH75066.1| 580|Homo sapiens synapsin III protein.
Length = 580
Score = 128 bits (310), Expect = 2e-29
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>BC075065-1|AAH75065.1| 580|Homo sapiens synapsin III, isoform IIIa
protein.
Length = 580
Score = 128 bits (310), Expect = 2e-29
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>AF046873-1|AAC15101.1| 580|Homo sapiens synapsin IIIa protein.
Length = 580
Score = 128 bits (310), Expect = 2e-29
Identities = 83/231 (35%), Positives = 125/231 (54%), Gaps = 29/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVSRSFKPDFILVRQHAYSMALGEDYRSLVIGLQYGGL 189
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 190 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
>M58378-2|AAC41931.1| 670|Homo sapiens synapsin Ib protein.
Length = 670
Score = 128 bits (309), Expect = 3e-29
Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 17/198 (8%)
Query: 143 SLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRR 202
SL V+ T AA + +G + A GRG R LLV+D+ +TDW+KYF+G++
Sbjct: 79 SLSNAVKQTTAAAAATFSEQVGGGSGGA--GRGGAASR--VLLVIDEPHTDWAKYFKGKK 134
Query: 203 LPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFV 262
+ G DI+VEQAEF +V ++ E+ +N R PDFV
Sbjct: 135 IHGGIDIKVEQAEFSDLNLVAHANGGFSVDM--------EVLRNGVKVVR---SLKPDFV 183
Query: 263 LVRQNVRDAG--ADHRALLLGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXXGREN 320
L+RQ+ D+R+L++GL++ G+PS+NSL+S+Y+F D+PWVF G E
Sbjct: 184 LIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEE 243
Query: 321 FPLIEQTYYHNHTDMVSS 338
FPLI+QT+Y NH +M+SS
Sbjct: 244 FPLIDQTFYPNHKEMLSS 261
>M58378-1|AAC41930.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 128 bits (309), Expect = 3e-29
Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 17/198 (8%)
Query: 143 SLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRR 202
SL V+ T AA + +G + A GRG R LLV+D+ +TDW+KYF+G++
Sbjct: 79 SLSNAVKQTTAAAAATFSEQVGGGSGGA--GRGGAASR--VLLVIDEPHTDWAKYFKGKK 134
Query: 203 LPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFV 262
+ G DI+VEQAEF +V ++ E+ +N R PDFV
Sbjct: 135 IHGGIDIKVEQAEFSDLNLVAHANGGFSVDM--------EVLRNGVKVVR---SLKPDFV 183
Query: 263 LVRQNVRDAG--ADHRALLLGLKFGGVPSINSLNSIYHFQDRPWVFGHXXXXXXXXGREN 320
L+RQ+ D+R+L++GL++ G+PS+NSL+S+Y+F D+PWVF G E
Sbjct: 184 LIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEE 243
Query: 321 FPLIEQTYYHNHTDMVSS 338
FPLI+QT+Y NH +M+SS
Sbjct: 244 FPLIDQTFYPNHKEMLSS 261
>BC117460-1|AAI17461.1| 579|Homo sapiens synapsin III protein.
Length = 579
Score = 126 bits (304), Expect = 1e-28
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 30/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 139
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V + + PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 140 MVDMQVVR----------NGTKVVRSFK-PDFILVRQHAYSMALGEDYRSLVIGLQYGGL 188
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 189 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 239
>AB209684-1|BAD92921.1| 611|Homo sapiens Synapsin-3 variant
protein.
Length = 611
Score = 126 bits (304), Expect = 1e-28
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 30/231 (12%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 56 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 111
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSR 229
G + R LLV+DD +TDWSKYF G+++ GE +IRVEQAEF +
Sbjct: 112 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGC 171
Query: 230 EYNLRIKRPYKFEITKNPTPTKRVDTRQWPDFVLVRQNVRDA--GADHRALLLGLKFGGV 287
++++ R TK V + + PDF+LVRQ+ G D+R+L++GL++GG+
Sbjct: 172 MVDMQVVR----------NGTKVVRSFK-PDFILVRQHAYSMALGEDYRSLVIGLQYGGL 220
Query: 288 PSINSLNSIYHFQDRPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVSS 338
P++NSL S+Y+F +PWVF G E FPL+EQT++ NH MV++
Sbjct: 221 PAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 271
>U40215-1|AAC50718.1| 478|Homo sapiens synapsin IIb protein.
Length = 478
Score = 122 bits (295), Expect = 1e-27
Identities = 77/208 (37%), Positives = 113/208 (54%), Gaps = 15/208 (7%)
Query: 132 SAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQN 191
SAP++ S+ S A Q A G V + A + + LLVVD+ +
Sbjct: 66 SAPAAQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAK--VLLVVDEPH 123
Query: 192 TDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEITKNPTPTK 251
DW+K FRG+++ G++DI+VEQAEF +V + ++++ R TK
Sbjct: 124 ADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLR----------NGTK 173
Query: 252 RVDTRQWPDFVLVRQNV--RDAGADHRALLLGLKFGGVPSINSLNSIYHFQDRPWVFGHX 309
V + + PDFVL+RQ+ D R L++G+++ G+PSINSL SIY+F D+PWVF
Sbjct: 174 VVRSFR-PDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQL 232
Query: 310 XXXXXXXGRENFPLIEQTYYHNHTDMVS 337
G E FPLIEQTYY NH +M++
Sbjct: 233 VAIYKTLGGEKFPLIEQTYYPNHKEMLT 260
>BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein.
Length = 582
Score = 122 bits (293), Expect = 2e-27
Identities = 66/156 (42%), Positives = 96/156 (61%), Gaps = 13/156 (8%)
Query: 184 LLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEI 243
LLVVD+ + DW+K FRG+++ G++DI+VEQAEF +V + ++++ R
Sbjct: 116 LLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLR------ 169
Query: 244 TKNPTPTKRVDTRQWPDFVLVRQNV--RDAGADHRALLLGLKFGGVPSINSLNSIYHFQD 301
TK V + + PDFVL+RQ+ D R L++G+++ G+PSINSL SIY+F D
Sbjct: 170 ----NGTKVVRSFR-PDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCD 224
Query: 302 RPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVS 337
+PWVF G E FPLIEQTYY NH +M++
Sbjct: 225 KPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLT 260
>AF077737-1|AAC33789.1| 478|Homo sapiens synapsin IIb protein.
Length = 478
Score = 122 bits (293), Expect = 2e-27
Identities = 66/156 (42%), Positives = 96/156 (61%), Gaps = 13/156 (8%)
Query: 184 LLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEI 243
LLVVD+ + DW+K FRG+++ G++DI+VEQAEF +V + ++++ R
Sbjct: 116 LLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLR------ 169
Query: 244 TKNPTPTKRVDTRQWPDFVLVRQNV--RDAGADHRALLLGLKFGGVPSINSLNSIYHFQD 301
TK V + + PDFVL+RQ+ D R L++G+++ G+PSINSL SIY+F D
Sbjct: 170 ----NGTKVVRSFR-PDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCD 224
Query: 302 RPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVS 337
+PWVF G E FPLIEQTYY NH +M++
Sbjct: 225 KPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLT 260
>AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein.
Length = 582
Score = 122 bits (293), Expect = 2e-27
Identities = 66/156 (42%), Positives = 96/156 (61%), Gaps = 13/156 (8%)
Query: 184 LLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEI 243
LLVVD+ + DW+K FRG+++ G++DI+VEQAEF +V + ++++ R
Sbjct: 116 LLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLR------ 169
Query: 244 TKNPTPTKRVDTRQWPDFVLVRQNV--RDAGADHRALLLGLKFGGVPSINSLNSIYHFQD 301
TK V + + PDFVL+RQ+ D R L++G+++ G+PSINSL SIY+F D
Sbjct: 170 ----NGTKVVRSFR-PDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCD 224
Query: 302 RPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVS 337
+PWVF G E FPLIEQTYY NH +M++
Sbjct: 225 KPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLT 260
>AB209088-1|BAD92325.1| 514|Homo sapiens synapsin II isoform IIb
variant protein.
Length = 514
Score = 122 bits (293), Expect = 2e-27
Identities = 66/156 (42%), Positives = 96/156 (61%), Gaps = 13/156 (8%)
Query: 184 LLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRLFLIVEVTLDSREYNLRIKRPYKFEI 243
LLVVD+ + DW+K FRG+++ G++DI+VEQAEF +V + ++++ R
Sbjct: 152 LLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLR------ 205
Query: 244 TKNPTPTKRVDTRQWPDFVLVRQNV--RDAGADHRALLLGLKFGGVPSINSLNSIYHFQD 301
TK V + + PDFVL+RQ+ D R L++G+++ G+PSINSL SIY+F D
Sbjct: 206 ----NGTKVVRSFR-PDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCD 260
Query: 302 RPWVFGHXXXXXXXXGRENFPLIEQTYYHNHTDMVS 337
+PWVF G E FPLIEQTYY NH +M++
Sbjct: 261 KPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLT 296
>Z83846-1|CAI95433.1| 113|Homo sapiens SYN3 protein.
Length = 113
Score = 37.9 bits (84), Expect = 0.051
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 17/94 (18%)
Query: 123 NLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSV------ASVGR-- 174
+L+ TS+P+SPA R + Q L + G++L S++S A+ G
Sbjct: 24 DLQRPDSSTSSPASPAMER----RHPQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLME 79
Query: 175 --GYNR---DRCVTLLVVDDQNTDWSKYFRGRRL 203
G + R LLV+DD +TDWSKYF G+++
Sbjct: 80 PPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKV 113
>X69089-1|CAA48832.1| 1465|Homo sapiens 165kD protein protein.
Length = 1465
Score = 37.1 bits (82), Expect = 0.088
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 146 QRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRRLPG 205
Q+ ++ A +++G L+G + V ++ G + T+ D W K + +L
Sbjct: 1331 QQFKAAAFAEKNRG-RLIGGLPDVVTIMEGKTLNLTCTVFGNPDPEVIWFKNDQDIQLSE 1389
Query: 206 EWDIRVEQAEFRLFLIVEVTL-DSREYNLRIKRPY 239
+ ++VEQA++ I VT DS +Y++ IK Y
Sbjct: 1390 HFSVKVEQAKYVSMTIKGVTSEDSGKYSINIKNKY 1424
>BC052969-1|AAH52969.1| 1465|Homo sapiens myomesin (M-protein) 2,
165kDa protein.
Length = 1465
Score = 37.1 bits (82), Expect = 0.088
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 146 QRVQSLTGAARDQGANLLGSVTSVASVGRGYNRDRCVTLLVVDDQNTDWSKYFRGRRLPG 205
Q+ ++ A +++G L+G + V ++ G + T+ D W K + +L
Sbjct: 1331 QQFKAAAFAEKNRG-RLIGGLPDVVTIMEGKTLNLTCTVFGNPDPEVIWFKNDQDIQLSE 1389
Query: 206 EWDIRVEQAEFRLFLIVEVTL-DSREYNLRIKRPY 239
+ ++VEQA++ I VT DS +Y++ IK Y
Sbjct: 1390 HFSVKVEQAKYVSMTIKGVTSEDSGKYSINIKNKY 1424
>U77718-1|AAB48304.1| 743|Homo sapiens pinin protein.
Length = 743
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Query: 87 PQAQKPTSQATXXXXXXXXXXXXXXXXXXXXXXXXXNLRGGSRGTSAPSSPAKSRESLLQ 146
P+++ T+ + + S G+S+ S + SR S
Sbjct: 576 PESESETNTRSRSRGRTRNRTTKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSS 635
Query: 147 RVQSLTGAARDQGANLLGSVTSVA-SVGRGYNRDR 180
+ ++RD ++ S S + S GRG+NRDR
Sbjct: 636 SSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDR 670
>BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome
associated protein protein.
Length = 717
Score = 31.9 bits (69), Expect = 3.3
Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Query: 87 PQAQKPTSQATXXXXXXXXXXXXXXXXXXXXXXXXXNLRGGSRGTSAPSSPAKSRESLLQ 146
P+++ T + + S G+S+ S + SR S
Sbjct: 550 PESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSS 609
Query: 147 RVQSLTGAARDQGANLLGSVTSVA-SVGRGYNRDR 180
+ ++RD ++ S S + S GRG+NRDR
Sbjct: 610 SSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDR 644
>AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome
associated protein variant protein.
Length = 717
Score = 31.9 bits (69), Expect = 3.3
Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Query: 87 PQAQKPTSQATXXXXXXXXXXXXXXXXXXXXXXXXXNLRGGSRGTSAPSSPAKSRESLLQ 146
P+++ T + + S G+S+ S + SR S
Sbjct: 550 PESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSS 609
Query: 147 RVQSLTGAARDQGANLLGSVTSVA-SVGRGYNRDR 180
+ ++RD ++ S S + S GRG+NRDR
Sbjct: 610 SSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDR 644
>AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein.
Length = 717
Score = 31.9 bits (69), Expect = 3.3
Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Query: 87 PQAQKPTSQATXXXXXXXXXXXXXXXXXXXXXXXXXNLRGGSRGTSAPSSPAKSRESLLQ 146
P+++ T + + S G+S+ S + SR S
Sbjct: 550 PESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSS 609
Query: 147 RVQSLTGAARDQGANLLGSVTSVA-SVGRGYNRDR 180
+ ++RD ++ S S + S GRG+NRDR
Sbjct: 610 SSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDR 644
>Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3
protein.
Length = 711
Score = 31.5 bits (68), Expect = 4.4
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Query: 87 PQAQKPTSQATXXXXXXXXXXXXXXXXXXXXXXXXXNLRGGSRGTSAPSSPAKSRESLLQ 146
P+++ T + + S G+S+ S + SR S
Sbjct: 544 PESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSS 603
Query: 147 RVQSLTGAARDQGANLLGSVTSVA-SVGRGYNRDR 180
+ + RD ++ S S + S GRG+NRDR
Sbjct: 604 SSSTSGSSGRDSSSSTSSSSESRSRSRGRGHNRDR 638
>AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3
protein.
Length = 717
Score = 31.5 bits (68), Expect = 4.4
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Query: 87 PQAQKPTSQATXXXXXXXXXXXXXXXXXXXXXXXXXNLRGGSRGTSAPSSPAKSRESLLQ 146
P+++ T + + S G+S+ S + SR S
Sbjct: 550 PESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSS 609
Query: 147 RVQSLTGAARDQGANLLGSVTSVA-SVGRGYNRDR 180
+ + RD ++ S S + S GRG+NRDR
Sbjct: 610 SSSTSGSSGRDSSSSTSSSSESRSRSRGRGHNRDR 644
>Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein.
Length = 586
Score = 30.7 bits (66), Expect = 7.7
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Query: 87 PQAQKPTSQATXXXXXXXXXXXXXXXXXXXXXXXXXNLRGGSRGTSAPSSPAKSRESLLQ 146
P+++ T + + S G+S+ S + SR S
Sbjct: 417 PESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSS 476
Query: 147 RVQSLTGAARDQGANLLGSVTSVA---SVGRGYNRDR 180
+ ++RD ++ S +S + S GRG+NRDR
Sbjct: 477 SSSTSGSSSRDSSSSTSTSSSSESRSRSRGRGHNRDR 513
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,675,376
Number of Sequences: 224733
Number of extensions: 1438354
Number of successful extensions: 2990
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2919
Number of HSP's gapped (non-prelim): 48
length of query: 338
length of database: 73,234,838
effective HSP length: 90
effective length of query: 248
effective length of database: 53,008,868
effective search space: 13146199264
effective search space used: 13146199264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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