Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000307-TA|BGIBMGA000307-PA|IPR000834|Peptidase M14,
carboxypeptidase A, IPR008969|Carboxypeptidase regulatory region
(483 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 187 2e-47
05_07_0063 - 27428056-27428184,27428321-27428460,27428698-274289... 37 0.041
04_03_0091 - 11043023-11043090,11043458-11043566,11044431-110445... 31 2.0
02_01_0141 + 1017654-1017745,1018332-1018389,1018485-1018595,101... 31 2.0
07_01_0664 + 4979892-4979931,4980040-4980236,4982340-4982723,498... 29 6.2
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 29 8.2
07_03_1438 - 26552160-26552291,26552430-26552535,26552772-26553283 29 8.2
05_06_0275 - 26869155-26870480 29 8.2
01_04_0073 + 15724882-15724947,15725036-15725072,15725464-15725849 29 8.2
01_04_0071 + 15707810-15707875,15707964-15708000,15708392-15708777 29 8.2
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 187 bits (455), Expect = 2e-47
Identities = 130/376 (34%), Positives = 203/376 (53%), Gaps = 74/376 (19%)
Query: 80 YIGNIHGNEVLGRELLLGLAHYLCDQYRKNDPEIKALITNTRIHLLPSMNPDGWQLATDT 139
Y+GN+HG+E +GRE+L+ LA++LCD Y K DP ++ N +H+LP+MNPDG+ L
Sbjct: 179 YVGNVHGDEPVGREVLIKLANWLCDNYLK-DPLATLIVKNMHLHILPTMNPDGFALRR-- 235
Query: 140 GGKDYLIGRTNNHEVDLNRNFPDLDAITFDFERQGLSHNNHLLKDLTQLSAPLEPETRAV 199
R N + VDLNR+FPD Q ++N+ + +PETRA+
Sbjct: 236 --------RGNANNVDLNRDFPD----------QFFTNNDEINYR--------QPETRAI 269
Query: 200 MRWIMSTPFVLSAAIHGGDLVANYPYDESKTGASAAEYSASPDDETFKELAMTYALAHAD 259
M W+ F SA++HGG LVANYP+D S+ + +Y PDD+TF+ +A Y+ +H +
Sbjct: 270 MNWVKQEHFTASASLHGGALVANYPWDGSRD--QSKQYYGCPDDKTFRYMASVYSQSHYN 327
Query: 260 MASPTRRGCHTTSSDDVSYNFGKQGGVTNGAAWYSLKGGMQDFNYLATNAFEITLELGCE 319
M+ +S F +GG+TNGA WY + GGMQD+NY+ FE+TLE+
Sbjct: 328 MS--------------LSKEF--KGGITNGAFWYPIYGGMQDWNYIHGGCFELTLEISDV 371
Query: 320 KYPSAELLETEWNRNREALVEY---LWKAHIGVKG-VVSDSKGFIPNAIISVVN------ 369
K+P A L W +NR +++ L K ++ + D + + P + + +
Sbjct: 372 KWPKAAELPVIWEQNRMSMLNLAASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGVHGR 431
Query: 370 ---------CTGSVT-KPIRHDV-TTGPYGDYYRLLTPGQ-YEITATHTG-HFQASRMVS 416
GS+T K I ++ + YGDY+R+L PG+ YE+ A+ G +A+R+V
Sbjct: 432 IFAADTGHPIPGSLTIKGIGSEIRASRTYGDYHRMLAPGENYEVMASMEGFRTKATRIVV 491
Query: 417 VPKNQKSAIILDFRLE 432
++ A+ LDF L+
Sbjct: 492 ----EEKAVSLDFILD 503
>05_07_0063 -
27428056-27428184,27428321-27428460,27428698-27428926,
27429231-27429281,27429411-27429636,27430230-27430300,
27430466-27430585,27430671-27430865,27431088-27431152,
27431232-27431322,27431607-27431707,27431767-27431817,
27432076-27432177,27432406-27432510,27432600-27432663,
27433023-27433151
Length = 622
Score = 36.7 bits (81), Expect = 0.041
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 76 PEAKYIGNIHGNEVLGRELLLGLAHYLCDQYRKNDPEIKALITNTRIHLLPSMNPDGWQL 135
PE K++ + G+E L + L + +L + P +++LIT T L +N G +
Sbjct: 281 PEYKHLAHRMGSEHLAKSL----SKHLETVIKSRIPGLQSLITKTIAELETELNRLGKPI 336
Query: 136 ATDTGGKDYLI 146
ATD GGK Y I
Sbjct: 337 ATDAGGKLYTI 347
>04_03_0091 -
11043023-11043090,11043458-11043566,11044431-11044577,
11044678-11044776,11044857-11044982,11045448-11045582,
11046391-11046468,11046553-11046678,11046828-11046968
Length = 342
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 100 HYLCDQYRKNDPEIKALITNTRIHLLPSMNPDGWQLATDTGGK 142
HYL + + E +A + +H + + PDGW + GGK
Sbjct: 66 HYLFSEMDERVLESQACADDNELHRMHTWLPDGWAIEVRAGGK 108
>02_01_0141 +
1017654-1017745,1018332-1018389,1018485-1018595,
1018853-1018990,1019559-1019628,1019711-1019766,
1020203-1020328,1020648-1020787,1020932-1021004,
1021095-1021169,1021277-1021591
Length = 417
Score = 31.1 bits (67), Expect = 2.0
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 85 HGNEVLGRELLLGLAHYLCDQYRKNDPEIKA---LITNTRIHLLPSMNPDGWQLATDTGG 141
HG E++ E+ L L + L ++ + ++ + ++ N I ++P N +G + + G
Sbjct: 92 HGRELITSEVALNLLYILTEKRKIAGVDLSSFEKILENLVIKVVPMENLNGRKRVEE--G 149
Query: 142 KDYLIGRTNNHEVDLNRNFPDLDAITFDFERQGLSHNNHLLKDLTQLSAPL-EPETRAVM 200
+ L R N VDLNRN+ + D+ ++ ++ + + +AP EPE + +
Sbjct: 150 E--LCDRRNGRGVDLNRNW------SVDWGKKEKDYDPY---EENPGTAPFSEPEAQIMR 198
Query: 201 RWIMSTPFVLSAAIHGGDLVANYPYDESKT---GASA 234
S + +H G PYD T GASA
Sbjct: 199 ELSKSFKPHMWVNVHSGMEALFMPYDHKNTTPNGASA 235
>07_01_0664 +
4979892-4979931,4980040-4980236,4982340-4982723,
4983499-4983549,4983659-4983741,4983818-4983917,
4984410-4984488,4984957-4985080,4985605-4985711,
4985810-4985938,4987004-4987089,4987200-4987367,
4987477-4987637,4987721-4987752,4987866-4988047,
4988386-4988465,4988885-4988950,4989060-4989349,
4990433-4990540,4991521-4991618,4991680-4991782,
4992269-4992345,4992449-4992520,4992579-4992670,
4992909-4992989,4993290-4993392,4994334-4994492,
4994696-4995085
Length = 1213
Score = 29.5 bits (63), Expect = 6.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 78 AKYIGNIHGNEVLGRELLLGLAHYLCDQYRKNDPEIKALI 117
A YI +GN+ L L A +QY K PE +ALI
Sbjct: 691 AVYIRRKYGNKPLSSSTYLSEAEPFLEQYAKRSPENQALI 730
>11_01_0515 +
4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 29.1 bits (62), Expect = 8.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 26 NEELPLVLQEVHNNCPNITRIYALSEPSVCNVPLYVIEFAQVPGFHRPYIPEAKYIGNIH 85
N+ + LV+ E H N + E VPL ++ PG +P I I N+
Sbjct: 281 NQLVCLVIDEAHRASRNYAYCVVVRELEAARVPLRILALTATPGSKQPAIQNV--INNLR 338
Query: 86 GNEVL 90
+E++
Sbjct: 339 ISELV 343
>07_03_1438 - 26552160-26552291,26552430-26552535,26552772-26553283
Length = 249
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 375 TKPIRHDVTTGPYGDYYRLLTPGQYEITATHTGHFQASRMVSVPKNQ 421
T P HD PY D P Y + +GH Q ++S +N+
Sbjct: 160 THPDIHDAAVAPYPDKEAGEIPMAYVVKKQGSGHLQEDEVISFVQNK 206
>05_06_0275 - 26869155-26870480
Length = 441
Score = 29.1 bits (62), Expect = 8.2
Identities = 20/72 (27%), Positives = 30/72 (41%)
Query: 183 KDLTQLSAPLEPETRAVMRWIMSTPFVLSAAIHGGDLVANYPYDESKTGASAAEYSASPD 242
KD P R+ ++ PFV SAA G A + K+ AA + + D
Sbjct: 237 KDFLARCLQRRPIDRSTAAQLLEHPFVASAAGDGKPEAAKSKWVSPKSTLDAALWESDTD 296
Query: 243 DETFKELAMTYA 254
+E EL+ + A
Sbjct: 297 EEEDDELSQSTA 308
>01_04_0073 + 15724882-15724947,15725036-15725072,15725464-15725849
Length = 162
Score = 29.1 bits (62), Expect = 8.2
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 15/129 (11%)
Query: 170 FERQGLSHNNHLLKDLTQLSAPLEPETR------AVMRWIMSTPFVLSAAIHGGDLVANY 223
F+ LSH LLK + + P+T+ A RWI ST S +
Sbjct: 9 FQSNNLSHVTFLLKLWVSHNPAVPPKTQNGGLGSARRRWIKSTASESSGGVRA------- 61
Query: 224 PYDESKTGASAAEYSASPDDETFKELAMTYALAHADMASPTRRGCHTTSSDDVSYNFGKQ 283
D TG S A SA+ D++ + A+T A +RR + V G
Sbjct: 62 --DPDGTGRSWAGLSAADSDDSDECEAVTGGSRTALSGGGSRRPAGKSRRQSVDLRRGST 119
Query: 284 GGVTNGAAW 292
+ G AW
Sbjct: 120 FVLGGGGAW 128
>01_04_0071 + 15707810-15707875,15707964-15708000,15708392-15708777
Length = 162
Score = 29.1 bits (62), Expect = 8.2
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 15/129 (11%)
Query: 170 FERQGLSHNNHLLKDLTQLSAPLEPETR------AVMRWIMSTPFVLSAAIHGGDLVANY 223
F+ LSH LLK + + P+T+ A RWI ST S +
Sbjct: 9 FQSNNLSHVTFLLKLWVSHNPAVPPKTQKGGLGSARRRWIKSTASESSGGVRA------- 61
Query: 224 PYDESKTGASAAEYSASPDDETFKELAMTYALAHADMASPTRRGCHTTSSDDVSYNFGKQ 283
D TG S A SA+ D++ + A+T A +RR + V G
Sbjct: 62 --DPDGTGRSWAGLSAADSDDSDECEAVTGGSRTALSGGGSRRPAGKSRRQSVDLRRGST 119
Query: 284 GGVTNGAAW 292
+ G AW
Sbjct: 120 FVLGGGGAW 128
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,027,349
Number of Sequences: 37544
Number of extensions: 668020
Number of successful extensions: 1309
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1296
Number of HSP's gapped (non-prelim): 14
length of query: 483
length of database: 14,793,348
effective HSP length: 85
effective length of query: 398
effective length of database: 11,602,108
effective search space: 4617638984
effective search space used: 4617638984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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