GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000307-TA|BGIBMGA000307-PA|IPR000834|Peptidase M14,
carboxypeptidase A, IPR008969|Carboxypeptidase regulatory region
         (483 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    26   0.51 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   6.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 26.2 bits (55), Expect = 0.51
 Identities = 15/52 (28%), Positives = 22/52 (42%)

Query: 11  LLLTVSAEFQWKHHNNEELPLVLQEVHNNCPNITRIYALSEPSVCNVPLYVI 62
           LLLT+     W  +    L ++      NCP    + ALS   +  V L+ I
Sbjct: 236 LLLTILTYLIWTIYEMYHLAILWSCTSTNCPRFLIMLALSYTVIQEVMLFTI 287


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 227 ESKTGASAAEYSASPDDETFKELAMTYA 254
           E +TG +A  YS S D +  K+L + +A
Sbjct: 286 ERETGHNAPLYSPSSDSQYQKQLNVEHA 313


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.134    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,227
Number of Sequences: 317
Number of extensions: 5605
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 483
length of database: 114,650
effective HSP length: 59
effective length of query: 424
effective length of database: 95,947
effective search space: 40681528
effective search space used: 40681528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)