GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000307-TA|BGIBMGA000307-PA|IPR000834|Peptidase M14,
carboxypeptidase A, IPR008969|Carboxypeptidase regulatory region
         (483 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    22   9.9  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    22   9.9  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    22   9.9  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    22   9.9  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    22   9.9  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    22   9.9  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    22   9.9  

>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 272 SSDDVSYNFGKQGGVTNGAAWYSLKGGMQDFNYLATNAFEITLELGCEKYPS 323
           SS   +YN+       N   + + K    + NY+      + + + C  +PS
Sbjct: 83  SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 272 SSDDVSYNFGKQGGVTNGAAWYSLKGGMQDFNYLATNAFEITLELGCEKYPS 323
           SS   +YN+       N   + + K    + NY+      + + + C  +PS
Sbjct: 83  SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 272 SSDDVSYNFGKQGGVTNGAAWYSLKGGMQDFNYLATNAFEITLELGCEKYPS 323
           SS   +YN+       N   + + K    + NY+      + + + C  +PS
Sbjct: 83  SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 272 SSDDVSYNFGKQGGVTNGAAWYSLKGGMQDFNYLATNAFEITLELGCEKYPS 323
           SS   +YN+       N   + + K    + NY+      + + + C  +PS
Sbjct: 83  SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 272 SSDDVSYNFGKQGGVTNGAAWYSLKGGMQDFNYLATNAFEITLELGCEKYPS 323
           SS   +YN+       N   + + K    + NY+      + + + C  +PS
Sbjct: 83  SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 272 SSDDVSYNFGKQGGVTNGAAWYSLKGGMQDFNYLATNAFEITLELGCEKYPS 323
           SS   +YN+       N   + + K    + NY+      + + + C  +PS
Sbjct: 83  SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 272 SSDDVSYNFGKQGGVTNGAAWYSLKGGMQDFNYLATNAFEITLELGCEKYPS 323
           SS   +YN+       N   + + K    + NY+      + + + C  +PS
Sbjct: 83  SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPS 134


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.134    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,909
Number of Sequences: 429
Number of extensions: 7039
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 7
length of query: 483
length of database: 140,377
effective HSP length: 60
effective length of query: 423
effective length of database: 114,637
effective search space: 48491451
effective search space used: 48491451
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)