GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000306-TA|BGIBMGA000306-PA|undefined
         (325 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.3  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 269 YFDHCVAMLHKNSPYTEKLSE 289
           Y++ C  +L+K+S +T+K  E
Sbjct: 309 YYEICPEILNKDSGWTKKWDE 329


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 233 RKMAFSLEELPAGTFAIGEYLSKEAVQDMQLMLEFFYFDHCVAMLHKNSPYTEKL 287
           RK+A  L  +     +I + LS       ++    FY+   VA+LH+  P T+ L
Sbjct: 88  RKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLHR--PDTQNL 140


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.136    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,298
Number of Sequences: 317
Number of extensions: 3028
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 2
length of query: 325
length of database: 114,650
effective HSP length: 57
effective length of query: 268
effective length of database: 96,581
effective search space: 25883708
effective search space used: 25883708
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 43 (21.4 bits)