Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000306-TA|BGIBMGA000306-PA|undefined
(325 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0199 - 15533619-15534107,15534956-15535362,15535559-155358... 51 1e-06
09_04_0203 - 15556064-15556561,15557537-15557581,15557852-155582... 49 4e-06
09_04_0204 - 15565684-15566223,15567272-15567678,15568143-155684... 49 6e-06
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 43 4e-04
06_03_1142 + 27961999-27962263,27963735-27965080,27965158-279654... 40 0.003
06_01_0629 - 4582045-4582140,4582218-4582480,4582584-4582704,458... 40 0.003
09_04_0214 + 15711576-15711891,15712615-15713903,15714410-157151... 39 0.005
06_01_0618 - 4492057-4492590,4492780-4493192,4493714-4494026,449... 39 0.005
07_03_0636 + 20168180-20168462,20168961-20170303,20170401-201706... 38 0.014
06_01_0621 - 4511583-4512116,4512307-4512719,4513236-4513482 36 0.058
09_04_0213 + 15706638-15707915 34 0.13
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928... 34 0.13
09_04_0196 - 15519175-15519648,15520347-15520748 33 0.31
06_01_0627 - 4567304-4567521,4567649-4567727,4567827-4568165,456... 32 0.54
05_01_0415 - 3275236-3276244,3276342-3276428,3276829-3277208,327... 32 0.72
03_01_0424 - 3253179-3253367,3253480-3253556,3253654-3253739,325... 32 0.72
09_04_0195 - 15509412-15509580,15510136-15510467,15510494-155109... 31 1.3
04_04_1399 - 33249210-33249359,33249521-33249597,33249735-332498... 31 1.7
08_02_0622 + 19422001-19422330,19422411-19422459,19422552-194227... 30 2.2
06_01_0617 - 4483517-4483978,4484093-4484490,4484814-4484898,448... 30 2.9
07_01_1079 + 9770444-9772756 29 6.7
07_03_1676 + 28584269-28584471,28585265-28585755,28587253-285873... 28 8.9
04_04_1313 - 32572594-32573793,32573827-32573832 28 8.9
>09_04_0199 -
15533619-15534107,15534956-15535362,15535559-15535862,
15537061-15538397,15539463-15539727
Length = 933
Score = 50.8 bits (116), Expect = 1e-06
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 42 GRSDFGIAALYSWYEEWKAMDFSVSVVRSAVICLVPA--PRVLESWELPFLPFGKSIWIA 99
G D I + Y +DF++ S V +VP R +W P +W
Sbjct: 534 GVYDAAIGDITIRYNRTSYVDFTLPYTESGVAMIVPVRDDRNKNTWVF-LKPLTTDLWFG 592
Query: 100 VVITFVYASIGLTIAQGCSSNKALLIVFGTIISQSQYI--VSDSWRIRSVIGWLLVSS-- 155
+ FVY +I + + + S+N L F + + Y +D R+ S++ L+V
Sbjct: 593 SIAFFVYTAIVIWLLERRSNNAELTGSFLRQLGIAIYFSFFADRERVDSILSRLVVIVWV 652
Query: 156 ---LILVSAYGAGLASTFTVPQYEPSIDTVQDLLNS 188
L++ S+Y A L+S TV Q +P++ V +LL +
Sbjct: 653 FVLLVITSSYTANLSSMLTVQQLQPTVTDVHELLKN 688
>09_04_0203 -
15556064-15556561,15557537-15557581,15557852-15558258,
15558538-15558841,15559421-15560757,15561492-15561750
Length = 949
Score = 49.2 bits (112), Expect = 4e-06
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 42 GRSDFGIAALYSWYEEWKAMDFSVSVVRSAVICLVPAPRVLESWELPFL-PFGKSIWIAV 100
G D I + Y +DF++ S V +VP + FL P +W
Sbjct: 532 GVYDAAIGDITIRYNRTSYVDFTLPYTESGVAMIVPVKDDRDKNTWVFLKPLTTGLWFGS 591
Query: 101 VITFVYASIGLTIAQGCSSNKALLIVFGTIISQSQYI--VSDSWRIRSVIGWLLVSS--- 155
+ F+Y ++ + + + +N L F + + Y +D R+ S++ L+V
Sbjct: 592 IAFFIYTAVVIWLLERRINNAELTGSFFRQLGIAIYFSFFADRERVDSILSRLVVIVWVF 651
Query: 156 --LILVSAYGAGLASTFTVPQYEPSIDTVQDLLNS 188
L++ S+Y A L+S TV Q +P++ + +LL S
Sbjct: 652 VLLVITSSYTANLSSMLTVQQLQPTVTDIHELLKS 686
>09_04_0204 -
15565684-15566223,15567272-15567678,15568143-15568446,
15568735-15570065,15570769-15570846,15570943-15571027
Length = 914
Score = 48.8 bits (111), Expect = 6e-06
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 42 GRSDFGIAALYSWYEEWKAMDFSVSVVRSAVICLVPAPRVLESWELPFL-PFGKSIWIAV 100
G D I + Y +DF++ S V +VP + FL P +W
Sbjct: 498 GVYDTAIGDITIRYNRTSYVDFTLPYTESGVAMIVPVKDDRDKNTWVFLKPLTTDLWFGS 557
Query: 101 VITFVYASIGLTIAQGCSSNKALLIVFGTIISQSQYI--VSDSWRIRSVIGWLLVSS--- 155
+ F+Y +I + + + +N L F + + Y +D R+ S++ L+V
Sbjct: 558 IAFFIYTAIVIWLLERRINNAELTGSFFRQLGIAIYFSFFADRERVDSILSRLVVIVWVF 617
Query: 156 --LILVSAYGAGLASTFTVPQYEPSIDTVQDLLNS 188
L++ S+Y A L+S TV Q +P++ V +LL +
Sbjct: 618 VLLVITSSYTANLSSMLTVQQLQPTVTDVHELLKN 652
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 42.7 bits (96), Expect = 4e-04
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 11/139 (7%)
Query: 61 MDFSVSVVRSAVICLVPAPRVLESWELPFLPFGKSIWIAVVITFVYAS----IGLTIAQ- 115
+DF+V S V +VP+ ++ + P + +W+A + F Y I L + +
Sbjct: 552 VDFTVPYTESGVAMIVPSKGTVDKTWIFLQPLSRDLWVATISMFFYTGCVVWIELNVVKL 611
Query: 116 -GCSSNKALLIVFGTIISQSQYIVSDSWRIRSVIGWLLV-----SSLILVSAYGAGLAST 169
G + V + + + ++ R+ ++ +++ LIL S Y A LA+
Sbjct: 612 TGWKGKMNYMQVGVRLETSFANQLKENERVERILSRIVLIVWVFFFLILSSGYTANLATM 671
Query: 170 FTVPQYEPSIDTVQDLLNS 188
TV Q +P+I+++ +L S
Sbjct: 672 LTVQQLKPTINSIDELRKS 690
>06_03_1142 +
27961999-27962263,27963735-27965080,27965158-27965435,
27965706-27965737,27965830-27966236,27966373-27966858
Length = 937
Score = 39.9 bits (89), Expect = 0.003
Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 14/182 (7%)
Query: 24 GEIYENETGIGVIGSVVEGRSDFGIAALYSWYEEWKAMDFSVSVVRSAVICLVPAPRVLE 83
G+ +N +I V D + K +FS + S ++ +VP
Sbjct: 519 GDGLKNPNYDDIINMVAANSLDAAVGDFAIVRNRTKIAEFSQPYIESGLVIVVPVKEASS 578
Query: 84 SWELPFLPFGKSIWIAVVITFVYASIGLTIAQ--------GCSSNKALLIV---FGTI-I 131
S PF +W + F++ I + I + G + + I F T+
Sbjct: 579 SAWAFLKPFTLEMWCVTGVLFIFVGIVVWILEHRTNEEFRGSPRRQMITIFWFSFSTMFF 638
Query: 132 SQSQYIVSDSWRIRSVIGWLLVSSLILVSAYGAGLASTFTVPQYEPSIDTVQDLLNSRME 191
+ Q VS R +I WL V LI+ S+Y A L S TV Q I + LL+S +
Sbjct: 639 AHRQNTVSALGRFVLII-WLFV-VLIINSSYTASLTSILTVQQLATGITGLDSLLSSALP 696
Query: 192 WG 193
G
Sbjct: 697 IG 698
>06_01_0629 -
4582045-4582140,4582218-4582480,4582584-4582704,
4582833-4583171,4583208-4583245,4583355-4583670,
4583753-4584006,4586417-4586546
Length = 518
Score = 39.9 bits (89), Expect = 0.003
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 6/157 (3%)
Query: 35 VIGSVVEGRSDFGIAALYSWYEEWKAMDFSVSVVRSAVICLVPAPRVLESW-ELPFL-PF 92
++ SV G +D + + + ++F++ S V LV A ES E FL P
Sbjct: 121 LVQSVSSGINDAAVGDITIIADRASHVEFTMPYTESGVSMLVLAKNESESKIEWVFLKPL 180
Query: 93 GKSIWIAVVITFVYASIGLTIAQGCSSNKALLIVFGTIISQSQYIVSDSWRIRSVIGWLL 152
K +W A VI F++ ++ + I + N +S + Y + G ++
Sbjct: 181 TKELWFATVIFFLFTALVIWIIEH-PRNMEYQGSNTRQLSTALYFAFSTLTFSH--GQII 237
Query: 153 VSSLI-LVSAYGAGLASTFTVPQYEPSIDTVQDLLNS 188
S L +V +Y A +S TV +++PS+ + LLN+
Sbjct: 238 KSPLSKIVVSYTASFSSILTVKRFKPSVTYLDQLLNN 274
>09_04_0214 +
15711576-15711891,15712615-15713903,15714410-15715117,
15715369-15715908
Length = 950
Score = 39.1 bits (87), Expect = 0.005
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 18/196 (9%)
Query: 61 MDFSVSVVRSAVICLVPAPRVLESWELPFL-PFGKSIWIAVVITFVYASIGLTIAQ---- 115
+DF++ S V LVP + FL P +W+ FV + +
Sbjct: 554 VDFTLPYTESGVRMLVPVQDQRQKTAWTFLQPLTADLWLGTAAFFVLTGFVVWFIEHRTN 613
Query: 116 ----GCSSNK---ALLIVFGTII-SQSQYIVSDSWRIRSVIGWLLVSSLILVSAYGAGLA 167
G N+ F T++ + Q IV++ R+ VI WL V LIL +Y A L+
Sbjct: 614 EDFRGPPVNQIGSVFYFAFSTLVFAHRQKIVNNLSRVLLVI-WLFVV-LILQRSYTASLS 671
Query: 168 STFTVPQYEPSIDTVQDLLNSRMEWGANHEAWTFSLALSSEPVAKKLIKQFKIYSFEELQ 227
S TV Q +P++ + +++ G ++++ L + KLI + S +E
Sbjct: 672 SILTVEQLQPTVTNLDEVIRKGANVGYLNDSFMPELLKRLKIDESKLI---ALDSPDEYN 728
Query: 228 RRSFLRKMAFSLEELP 243
++A ++E+P
Sbjct: 729 EALSTGRVAVVVDEIP 744
>06_01_0618 -
4492057-4492590,4492780-4493192,4493714-4494026,
4495257-4495828,4498324-4498600
Length = 702
Score = 39.1 bits (87), Expect = 0.005
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 35 VIGSVVEGRSDFGIAALYSWYEEWKAMDFSVSVVRSAVICLVPAPRVLESWELPFL-PFG 93
++ +V G+ + + + ++F++ S V LVP + + F+ P
Sbjct: 276 LVRNVSSGKFSAAVGDVTITADRENLVEFTMPYTSSGVSLLVPEENDSKPIQWIFVKPLT 335
Query: 94 KSIWIAVVITFVYASIGLTIA--------QGCSSNK---ALLIVFGTI-ISQSQYIVSDS 141
+ +W+A + F Y + + QG S + A F T+ S Q I S
Sbjct: 336 RDLWLATIGFFFYTGFVVWMIEQPRNPEYQGSSVRQLSTASYFAFSTLTFSHGQIIKSPL 395
Query: 142 WRIRSVIGWLLVSSLILVSAYGAGLASTFTVPQYEPSIDTVQDLL 186
+I VI W V LILV +Y A L+S T + PS+ ++ LL
Sbjct: 396 SKIVVVI-WCFVV-LILVQSYTASLSSMLTAKRLRPSVKSLDQLL 438
>07_03_0636 +
20168180-20168462,20168961-20170303,20170401-20170678,
20170790-20170821,20170908-20171314,20171401-20171847
Length = 929
Score = 37.5 bits (83), Expect = 0.014
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 19 DVDLWGEIYENETGIGVIGSVVEGRSDFGIAALYSWYEEWKAMDFSVSVVRSAVICLVPA 78
D L+G+ +N + +I V + D I + + +DF+ S +I L PA
Sbjct: 519 DFILFGDGLKNPSYNDLIEKVSDNHFDAAIGDIAIVTNRTRLVDFTQPYTESGLIILAPA 578
Query: 79 PRVLESWELPFL-PFGKSIW--IAVVITFVYASIGL------TIAQGCSSNKALLIV--- 126
R +ES FL PF +W + V+ FV A + + T +G + + +
Sbjct: 579 -REIESNAWAFLKPFTFQMWSVLGVLFLFVGAVVWVLEHRTNTEFRGPPRQQIMTVCWFS 637
Query: 127 FGTI-ISQSQYIVSDSWRIRSVIGWLLVSSLILVSAYGAGLASTFTVPQYEPSIDTVQDL 185
F T+ + + VS R ++ WL V LI+ S+Y A L S TV + I + L
Sbjct: 638 FSTMFFAHRENTVSALGRFVLLV-WLFV-VLIINSSYTASLTSLLTVQELTSGIQGLDSL 695
Query: 186 LNS 188
++S
Sbjct: 696 ISS 698
>06_01_0621 - 4511583-4512116,4512307-4512719,4513236-4513482
Length = 397
Score = 35.5 bits (78), Expect = 0.058
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 70 SAVICLVPAPRVLESWELPFL-PFGKSIWIAVVITFVYASIGLTIA--------QGCSSN 120
S V LVP + + F+ P + +W+A + F Y + + QG S
Sbjct: 6 SGVSLLVPEENDSKPIQWIFVKPLTRDLWLATIGFFFYTGFVVWMIEQPRNPEYQGSSVR 65
Query: 121 K---ALLIVFGTI-ISQSQYIVSDSWRIRSVIGWLLVSSLILVSAYGAGLASTFTVPQYE 176
+ A F T+ S Q I S +I VI W V LILV +Y A L+S T +
Sbjct: 66 QLSTASYFAFSTLTFSHGQIIKSPLSKIVVVI-WCFVV-LILVQSYTASLSSMLTAKRLR 123
Query: 177 PSIDTVQDLL 186
PS+ ++ LL
Sbjct: 124 PSVKSLDQLL 133
>09_04_0213 + 15706638-15707915
Length = 425
Score = 34.3 bits (75), Expect = 0.13
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 127 FGTII-SQSQYIVSDSWRIRSVIGWLLVSSLILVSAYGAGLASTFTVPQYEPSI 179
F T++ + + + S+ R+ +V+ + +V LIL S+Y A L S TVP+ EPSI
Sbjct: 91 FSTLVFAHREDLRSNLARLAAVVWFFVV--LILQSSYTASLTSMLTVPRLEPSI 142
>02_05_1011 +
33487670-33487958,33490794-33492100,33492541-33492853,
33493190-33494247
Length = 988
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 127 FGTII-SQSQYIVSDSWRIRSVIGWLLVSSLILVSAYGAGLASTFTVPQYEPSIDTVQDL 185
F T++ S + + S+ R +I W+ V LIL S+Y A L S TV + +P++ V++L
Sbjct: 629 FSTLVFSHKEKLESNLSRFVVII-WVFVV-LILTSSYTASLTSMLTVQKLQPTVTDVREL 686
Query: 186 L 186
L
Sbjct: 687 L 687
>09_04_0196 - 15519175-15519648,15520347-15520748
Length = 291
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 147 VIGWLLVSSLILVSAYGAGLASTFTVPQYEPSIDTVQDLLNS 188
+I WL L+L S+Y A L S TV Q +P++ V +LL +
Sbjct: 11 LIIWLFFL-LVLTSSYTASLTSMLTVQQLQPTVTDVHELLKN 51
>06_01_0627 -
4567304-4567521,4567649-4567727,4567827-4568165,
4568202-4568239,4568462-4568837
Length = 349
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 148 IGWLLVSSLI-LVSAYGAGLASTFTVPQYEPSIDTVQDLL 186
+G ++ S L +V +YGA LAS TV +++PS+ + LL
Sbjct: 125 LGQIIKSPLSKIVVSYGASLASILTVKRFQPSVTDLDQLL 164
>05_01_0415 -
3275236-3276244,3276342-3276428,3276829-3277208,
3279236-3279325
Length = 521
Score = 31.9 bits (69), Expect = 0.72
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 65 VSVVRSAVICLVPAPRVLESWELPFLPFGKSIWIAVVITFV--------YASIGLTIAQG 116
+S+ RS + +++++W L F+ +W +VI +V Y + T+AQ
Sbjct: 137 LSLPRSFTLFDFGERKLVKNWHL-FICVSAGLWAGLVIGYVTEYFTSNAYGPVQ-TVAQS 194
Query: 117 CSSNKALLIVFGTIISQSQYIVSDSWRIRSVIGWLLVSSLILVSAYGAGLAS 168
C + A ++FG + IV I ++ G + +S L + YG LA+
Sbjct: 195 CRTGAATNVIFGLAVGYKSVIVP----IFAIAG-AIYASFRLAAMYGIALAA 241
>03_01_0424 -
3253179-3253367,3253480-3253556,3253654-3253739,
3253844-3254321,3254393-3254519,3254624-3254740,
3254853-3254966,3256650-3256715,3257738-3258117,
3258217-3258496
Length = 637
Score = 31.9 bits (69), Expect = 0.72
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 66 SVVRSAVICLVPAPRVLESWELPFLPFGKSIWIAVVITFVYASIGLTIAQGCSSNKALLI 125
+++ SA++ L+ P + W++ + F + + + F IGL +A G S + LL
Sbjct: 409 AIIMSAMLGLIDYPAAVHLWQVDKVDFCVCLGAYLGVVFGSVEIGLVVAVGISILRVLLF 468
Query: 126 V 126
V
Sbjct: 469 V 469
>09_04_0195 -
15509412-15509580,15510136-15510467,15510494-15510900,
15511467-15511581,15512711-15514044,15514558-15514819
Length = 872
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 147 VIGWLLVSSLILVSAYGAGLASTFTVPQYEPSIDTVQDLLNSRMEWGANHEAWTFSLALS 206
++ WL L+L S+Y A L S TV Q +P+ V +LL + G ++ L L
Sbjct: 583 LVVWLFFI-LVLKSSYTASLTSMLTVQQLQPTAHDVHELLKNGEYIGCGSGSFVMGL-LE 640
Query: 207 SEPVAKKLIKQF 218
+ +IK +
Sbjct: 641 ELGFPRSMIKPY 652
>04_04_1399 -
33249210-33249359,33249521-33249597,33249735-33249814,
33249904-33250094,33250183-33250469,33250595-33250721,
33250878-33250994,33251085-33251198,33251510-33251671,
33252909-33252974,33253098-33253269,33253377-33253584,
33253728-33253776,33254132-33254305
Length = 657
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 66 SVVRSAVICLVPAPRVLESWELPFLPFGKSIWIAVVITFVYASIGLTIAQGCSSNKALL 124
+++ +AVI L+ P V W++ + F + + F+ GL IA G S + LL
Sbjct: 444 AIIIAAVIGLIDLPAVYNIWKMDKMDFLVCLCAFAGVIFISVQQGLAIAVGISIFRVLL 502
>08_02_0622 +
19422001-19422330,19422411-19422459,19422552-19422759,
19422832-19423006,19423101-19423166,19423264-19423377,
19423473-19423589,19423677-19423803,19423893-19424179,
19424279-19424469,19424571-19424656,19424749-19424825,
19425057-19425200
Length = 656
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 66 SVVRSAVICLVPAPRVLESWELPFLPFGKSIWIAVVITFVYASIGLTIAQGCSSNKALLI 125
S++ SAVI LV V+ W++ + F + + F IGL IA S K LL
Sbjct: 443 SIIISAVIGLVDYEAVILIWKVDKMDFISCMGAFFGVVFASVEIGLLIAVSISFAKILLQ 502
Query: 126 V 126
V
Sbjct: 503 V 503
>06_01_0617 -
4483517-4483978,4484093-4484490,4484814-4484898,
4485002-4485838
Length = 593
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 132 SQSQYIVSDSWRIRSVIGWLLVSSLILVSAYGAGLASTFTVPQYEPSIDTVQDLLNSRME 191
+QS I+ V+ W + +ILV +Y A L+S T + PS+ + L ++
Sbjct: 305 TQSGQIIRSPMSKIVVVIWCF-AVVILVQSYTASLSSMLTTSRLRPSVVDLDQLRHNNDY 363
Query: 192 WGANHEAWTFSL 203
G ++++ +SL
Sbjct: 364 VGYQNKSFVYSL 375
>07_01_1079 + 9770444-9772756
Length = 770
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 47 GIAALYSWYEEWKAMDFSVSVVRSAVICLVPAPR 80
GI++ W++EW+ ++S + I LV APR
Sbjct: 2 GISSAIQWWDEWQLRILALSSLLVQYILLVMAPR 35
>07_03_1676 +
28584269-28584471,28585265-28585755,28587253-28587335,
28587416-28587530,28587608-28587716,28587925-28587938,
28588019-28588201,28588301-28588407,28588836-28589078,
28589184-28589198
Length = 520
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 188 SRMEWGANHEAWTFSLALSSEPVAKKLIKQFKIYSFEELQRRSFL-RKMAFSLEELPAGT 246
SR+ W H W+F + ++ P K L+ ++LQ + F+ ++A E
Sbjct: 234 SRLAW---HSTWSFDMESTNSPRGKSLLTSNLSDKTQDLQYKGFICNEIANEFEVSLKNH 290
Query: 247 FAIGEYLSKEA 257
F+I + L + A
Sbjct: 291 FSIHQTLGRGA 301
>04_04_1313 - 32572594-32573793,32573827-32573832
Length = 401
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 223 FEELQRRSFLRKMAFSLEELPAGTFAIGEYLSKEAV 258
F++L +++ E+LPAG FA GE L+ E V
Sbjct: 15 FDQLSPNLSKKRIHSLQEDLPAGQFASGEQLTDEEV 50
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.136 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,278,467
Number of Sequences: 37544
Number of extensions: 364580
Number of successful extensions: 844
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 823
Number of HSP's gapped (non-prelim): 25
length of query: 325
length of database: 14,793,348
effective HSP length: 82
effective length of query: 243
effective length of database: 11,714,740
effective search space: 2846681820
effective search space used: 2846681820
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
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