Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000304-TA|BGIBMGA000304-PA|undefined
(180 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070574-1|AAL48045.1| 328|Drosophila melanogaster RE11768p pro... 44 1e-04
AE014297-4001|AAF56629.1| 328|Drosophila melanogaster CG5491-PA... 44 1e-04
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 32 0.39
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 32 0.39
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 32 0.39
Y14999-1|CAB40628.1| 1408|Drosophila melanogaster Bip2 protein p... 29 4.9
AJ292191-1|CAC34474.1| 1408|Drosophila melanogaster TAFII155 pro... 29 4.9
AJ251945-1|CAB64265.1| 1406|Drosophila melanogaster BIP2 protein... 29 4.9
AY069463-1|AAL39608.1| 779|Drosophila melanogaster LD18949p pro... 28 6.4
AY069276-1|AAL39421.1| 363|Drosophila melanogaster GM10839p pro... 28 6.4
AE014135-85|AAF59342.1| 1406|Drosophila melanogaster CG2009-PA p... 28 6.4
AE014134-741|AAF51010.1| 1008|Drosophila melanogaster CG15439-PA... 28 6.4
AY118778-1|AAM50638.1| 1430|Drosophila melanogaster GH12223p pro... 28 8.5
AE013599-323|AAF59276.1| 1430|Drosophila melanogaster CG1845-PA ... 28 8.5
>AY070574-1|AAL48045.1| 328|Drosophila melanogaster RE11768p
protein.
Length = 328
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 65 DLTCAVCRQIAVQAGNRLVECDGCRALYHQVGNVQPV 101
DL C VC ++ A NRL+EC C A+YHQ + P+
Sbjct: 128 DLNCCVCGEMVFTATNRLIECSKCGAMYHQECHKPPI 164
>AE014297-4001|AAF56629.1| 328|Drosophila melanogaster CG5491-PA
protein.
Length = 328
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 65 DLTCAVCRQIAVQAGNRLVECDGCRALYHQVGNVQPV 101
DL C VC ++ A NRL+EC C A+YHQ + P+
Sbjct: 128 DLNCCVCGEMVFTATNRLIECSKCGAMYHQECHKPPI 164
>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
protein rhinoceros protein.
Length = 3241
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 63 EEDLTCAVCRQIAVQAGNRLVECDGCRALYHQ 94
+E++ C VCR + N +V CD C HQ
Sbjct: 310 DENVICDVCRSPDSEEANEMVFCDNCNICVHQ 341
>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
isoform B protein.
Length = 3241
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 63 EEDLTCAVCRQIAVQAGNRLVECDGCRALYHQ 94
+E++ C VCR + N +V CD C HQ
Sbjct: 310 DENVICDVCRSPDSEEANEMVFCDNCNICVHQ 341
>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
isoform A protein.
Length = 3201
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 63 EEDLTCAVCRQIAVQAGNRLVECDGCRALYHQ 94
+E++ C VCR + N +V CD C HQ
Sbjct: 310 DENVICDVCRSPDSEEANEMVFCDNCNICVHQ 341
>Y14999-1|CAB40628.1| 1408|Drosophila melanogaster Bip2 protein
protein.
Length = 1408
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 68 CAVCRQIAVQAGNRLVECDGCRALYHQV 95
C C + V G+ ++ CDGC A YH +
Sbjct: 1345 CPACGK--VDEGSAMIGCDGCDAWYHWI 1370
>AJ292191-1|CAC34474.1| 1408|Drosophila melanogaster TAFII155 protein
protein.
Length = 1408
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 68 CAVCRQIAVQAGNRLVECDGCRALYHQV 95
C C + V G+ ++ CDGC A YH +
Sbjct: 1345 CPACGK--VDEGSAMIGCDGCDAWYHWI 1370
>AJ251945-1|CAB64265.1| 1406|Drosophila melanogaster BIP2 protein
protein.
Length = 1406
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 68 CAVCRQIAVQAGNRLVECDGCRALYHQV 95
C C + V G+ ++ CDGC A YH +
Sbjct: 1343 CPACGK--VDEGSAMIGCDGCDAWYHWI 1368
>AY069463-1|AAL39608.1| 779|Drosophila melanogaster LD18949p
protein.
Length = 779
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 65 DLTCAVCRQIAVQAGNRLVECDGCRALYH 93
+++C VC Q N++V CD C YH
Sbjct: 718 EISCCVCSQTG--KSNQVVTCDECHRHYH 744
>AY069276-1|AAL39421.1| 363|Drosophila melanogaster GM10839p
protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 68 CAVCRQIAVQAGNRLVECDGCRALYHQV 95
C C + V G+ ++ CDGC A YH +
Sbjct: 300 CPACGK--VDDGSAMIGCDGCDAWYHWI 325
>AE014135-85|AAF59342.1| 1406|Drosophila melanogaster CG2009-PA
protein.
Length = 1406
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 68 CAVCRQIAVQAGNRLVECDGCRALYHQV 95
C C + V G+ ++ CDGC A YH +
Sbjct: 1343 CPACGK--VDDGSAMIGCDGCDAWYHWI 1368
>AE014134-741|AAF51010.1| 1008|Drosophila melanogaster CG15439-PA
protein.
Length = 1008
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 65 DLTCAVCRQIAVQAGNRLVECDGCRALYH 93
+++C VC Q N++V CD C YH
Sbjct: 947 EISCCVCSQTG--KSNQVVTCDECHRHYH 973
>AY118778-1|AAM50638.1| 1430|Drosophila melanogaster GH12223p
protein.
Length = 1430
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 44 ERENDDGSVMDGELAFDLLEEDLTCAVCRQIAVQAGNRLVECDGCRALYHQ 94
E+E+ + +G +++D C +C Q N ++ CD C HQ
Sbjct: 262 EKESHFQAAANGTPTGVEVDDDAVCCICLDGECQNTNVILFCDMCNLAVHQ 312
>AE013599-323|AAF59276.1| 1430|Drosophila melanogaster CG1845-PA
protein.
Length = 1430
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 44 ERENDDGSVMDGELAFDLLEEDLTCAVCRQIAVQAGNRLVECDGCRALYHQ 94
E+E+ + +G +++D C +C Q N ++ CD C HQ
Sbjct: 262 EKESHFQAAANGTPTGVEVDDDAVCCICLDGECQNTNVILFCDMCNLAVHQ 312
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.319 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,412,408
Number of Sequences: 52641
Number of extensions: 265369
Number of successful extensions: 565
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 554
Number of HSP's gapped (non-prelim): 19
length of query: 180
length of database: 24,830,863
effective HSP length: 80
effective length of query: 100
effective length of database: 20,619,583
effective search space: 2061958300
effective search space used: 2061958300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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