Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000303-TA|BGIBMGA000303-PA|IPR005225|Small GTP-binding
protein domain, IPR013753|Ras, IPR003577|Ras small GTPase, Ras type,
IPR003579|Ras small GTPase, Rab type, IPR003578|Ras small GTPase, Rho
type, IPR001806|Ras GTPase
(209 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 131 4e-31
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 123 1e-28
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 116 2e-26
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 105 2e-23
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 5e-21
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 96 2e-20
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 95 3e-20
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 91 5e-19
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 91 8e-19
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 86 2e-17
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 81 5e-16
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 9e-16
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 79 2e-15
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 79 3e-15
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 79 3e-15
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 76 2e-14
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 73 2e-13
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 72 4e-13
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 71 9e-13
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 71 9e-13
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 64 1e-10
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 63 2e-10
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 62 4e-10
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 60 1e-09
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 60 2e-09
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 56 2e-08
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 54 9e-08
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 54 9e-08
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 52 5e-07
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 52 5e-07
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 52 5e-07
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 50 1e-06
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 49 3e-06
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 48 4e-06
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 48 6e-06
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 47 1e-05
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 47 1e-05
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 46 3e-05
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 44 9e-05
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 44 9e-05
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 42 3e-04
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 42 3e-04
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 42 5e-04
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 41 9e-04
SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06) 40 0.001
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 40 0.001
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 40 0.001
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 40 0.002
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 39 0.003
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 38 0.006
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 38 0.006
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 38 0.008
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 37 0.014
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.056
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 34 0.099
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 33 0.17
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 32 0.40
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 32 0.40
SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05) 32 0.40
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 31 0.53
SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22) 30 1.2
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 30 1.2
SB_39298| Best HMM Match : Ras (HMM E-Value=0.11) 30 1.6
SB_51520| Best HMM Match : Flavoprotein (HMM E-Value=1.4) 29 3.7
SB_50367| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_43287| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 27 8.6
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 27 8.6
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 131 bits (317), Expect = 4e-31
Identities = 75/166 (45%), Positives = 100/166 (60%), Gaps = 19/166 (11%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSH 66
+Y+VVV G+GGVGKS+L ++FV G F E Y PTIED Y T G+
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYH----------------TAGTE 46
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
QF +M+ L I G F+LVYS+ +RQ+ +LKP+ I +KG E N+P++L GNK D
Sbjct: 47 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSE--NVPIVLVGNKSDI 104
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEK 172
E REVS E + A+AWG F ETSAKT NV ++F E++ K
Sbjct: 105 YDE-REVSVGEAKDLAEAWGCPFYETSAKTRSNVDKVFAEVVRRMK 149
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 123 bits (296), Expect = 1e-28
Identities = 64/133 (48%), Positives = 87/133 (65%), Gaps = 3/133 (2%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSH 66
+Y+VVV G+GGVGKS+L ++FV G F E Y PTIED YR+ I + L+I DT G+
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGTE 62
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
QF +M+ L I G F+LVYS+ +RQ+ +LKP+ I +KG E N+P++L GNK D
Sbjct: 63 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSE--NVPIVLVGNKSDI 120
Query: 127 SPEIREVSASEGQ 139
E REVS S +
Sbjct: 121 YDE-REVSTSNAK 132
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 116 bits (278), Expect = 2e-26
Identities = 60/132 (45%), Positives = 87/132 (65%), Gaps = 5/132 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTI-CTLQITDTTGSH 66
+RVVV G+GGVGK+SLV RF+ GTF E Y PT+ D Y + ++ +K L+I DT GS+
Sbjct: 108 FRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSY 167
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD- 125
FPAM++L+I AF+LVYSV + SL+E + + I IKG +P++L GNK D
Sbjct: 168 PFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKG---KTVPMVLVGNKTDL 224
Query: 126 ESPEIREVSASE 137
S E+R+ + ++
Sbjct: 225 VSEELRQSTRAQ 236
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 105 bits (253), Expect = 2e-23
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 3/136 (2%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQ 67
Y++VV G GGVGKS+L ++F++ F Y PTIED+YR+ ++ + L I DT G +
Sbjct: 12 YKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQEE 71
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
F AM+ + G F+LV+SV+ R S EE+ + I +K + P+++ GNK D
Sbjct: 72 FSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVK--DRTEFPMIICGNKSDLE 129
Query: 128 PEIREVSASEGQAQAQ 143
E R VS +EGQ A+
Sbjct: 130 YE-RTVSTAEGQELAR 144
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 97.9 bits (233), Expect = 5e-21
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSH 66
DY +V+ G GVGKS+L++RF G F Y PT+E TY + ++ TL ITDT ++
Sbjct: 127 DYSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTASTY 186
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
+ + +S+ FI+VYS++ ++ E K + + I+EIK + ++LAGNKCD
Sbjct: 187 -----EPVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCD- 240
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNV 176
R VS E + A F ETSA N N +F + + ++ ++
Sbjct: 241 LKHCRAVSRQEAREFAAEHECVFHETSAANNINTKVIFHDCVRQIRSTHL 290
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 96.3 bits (229), Expect = 2e-20
Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSH 66
DY++ + GAGGVGK+SL+ F F E ++PT++D + ++ + + I DT G++
Sbjct: 12 DYKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAGTY 71
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIK---GVELPNIPVMLAGNK 123
FP M+RL+I AFI+V++++S S E I I IK G E I + L NK
Sbjct: 72 AFPVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEIYSIKVKAGSEAKKIILNLVANK 131
Query: 124 CDESPEIREVSASEGQAQ--AQAWGV-SFMETSAKTNHNVTQLFQELLNM 170
D R ++A+ A+ ++W +ME S+ N V + F ++ +
Sbjct: 132 LDIDCRERVITAARAHAELSKRSWLTGEYMEISSMLNFRVERTFHSIVKL 181
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 95.5 bits (227), Expect = 3e-20
Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY-RQVISSNKTICTLQITDTTGSH 66
+++V+ G VGKSSLVLRFVKG F E TI + Q + + T +I DT G
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
++ ++ + A I+VY ++++ + K W +KE++ PNI + L+GNK D
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARAK-TW--VKELQRQASPNIVIALSGNKADL 138
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
+ + R V + Q+ A+ G+ FMETSAKT NV +F
Sbjct: 139 ASK-RMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIF 175
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 91.5 bits (217), Expect = 5e-19
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 7/171 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQ 67
+ +V FGA VGK+SL+LRF+ F + Y PTIED + + + N LQI DT+G+++
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKHVFFNNETYELQIIDTSGTYE 88
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
FPAM+++ I+KG AF+LVYS +S +L I E P I V+ N +
Sbjct: 89 FPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNRHPCI-VVCNKNDLPLA 147
Query: 128 PEIREVSASEG-QAQAQ-----AWGVSFMETSAKTNHNVTQLFQELLNMEK 172
+ ++ G + AQ W +++ SAK N V +F L++ K
Sbjct: 148 THLGVLTDHRGLRISAQHLVQTEWQSLWIDCSAKENSQVEDIFLRLMDEMK 198
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 90.6 bits (215), Expect = 8e-19
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 7/162 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
+++++ G GVGKSSL+LRF TF +YI TI + R + KTI LQI DT G
Sbjct: 9 FKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTI-KLQIWDTAGQ 67
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F + H +L+Y V+ ++ L Q ++E+ + +L GNKCD
Sbjct: 68 ERFRTLTTAYYRSAHGIVLIYDVNESETFLHLS---QWLEEVSEYACEGVNTILVGNKCD 124
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
+ R+V + + A+ +SF+ETSAK + NV +F+ +
Sbjct: 125 -LIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTM 165
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 86.2 bits (204), Expect = 2e-17
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 1 MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQIT 60
+ + + V+ G GGVGK+SL++ ++ F SY+PT DTY + NK +C ++
Sbjct: 12 LERKKEQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFC 71
Query: 61 DTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLA 120
DT G F A++ L S FI+ +SV S S + W I EI+ + P P++L
Sbjct: 72 DTAGQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKW--IPEIREFQ-PKAPIILV 128
Query: 121 GNKCDES---PEIREVSASEGQ--AQAQAWG-------VSFMETSAKTNHNVTQLFQELL 168
G D + E+S + Q + +A G V ++ETS+ T N+ +F E +
Sbjct: 129 GTHSDLKDCYKILTELSQQDSQPISVKKAEGLVKKTRCVCYVETSSVTQKNLKTVFDEAI 188
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 86.2 bits (204), Expect = 2e-17
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIE-DTYRQVISSNKTICTLQITDTTGSH 66
+++V G GVGKSSL RF+ F E Y PTI D + + + LQI DT G
Sbjct: 164 HKIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQE 223
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
+F + I A ++V+ +++ S E + W +K ++ +++ GNK DE
Sbjct: 224 RFRCLIHSYIRDSEAALIVFDITNYTSFESVGD-W--VKMVRDERGEKAVIIIVGNKMDE 280
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
S + R+VS + A+ G+S++ETSAK+ +NV LF +L
Sbjct: 281 S-DRRKVSYDVAEKSAERLGLSYVETSAKSGYNVKLLFTKL 320
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 1 MPEQSND-YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQI 59
M E+ N + + VFG GVGK+S+V RF G F E Y PT+ED Y +V++ N +I L
Sbjct: 1 MKEKRNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNT 60
Query: 60 TDTTGSHQFPAMQRLSISK 78
TD++GS+QFPAM+ ++I +
Sbjct: 61 TDSSGSYQFPAMREVAIKR 79
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 80.6 bits (190), Expect = 9e-16
Identities = 64/196 (32%), Positives = 93/196 (47%), Gaps = 28/196 (14%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKG---------------------TFRESYIPTI 40
PE +++++ G GVGKS L+LRF T+ ESYI TI
Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTI 62
Query: 41 EDTY--RQVISSNKTICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELK 98
+ R + KTI LQI DT G +F + H I+VY V+ ++S +K
Sbjct: 63 GVDFKIRTIELDGKTI-KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVK 121
Query: 99 PIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNH 158
Q ++EI N+ +L GNKCD + + + V + + A++ GV F+ETSAK
Sbjct: 122 ---QWLQEIDRYACENVNKLLVGNKCDLTTK-KVVDFTTAKEYAESLGVPFLETSAKNAT 177
Query: 159 NVTQLFQELLNMEKNR 174
NV Q F + KNR
Sbjct: 178 NVEQAFMTMAAEIKNR 193
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 79.4 bits (187), Expect = 2e-15
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTI-CTLQI 59
P+ +R+++ G VGKSSL+ +F +G F E+ PT+ D + +V+ + LQI
Sbjct: 8 PKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQI 67
Query: 60 TDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVML 119
DT G +F ++ +++Y +++R S + ++ K+ VE + ML
Sbjct: 68 WDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQC--VEEAEVVFML 125
Query: 120 AGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF----QELLNMEKNRN 175
G+K D+ + R VS EG+ A+A + F+ETSAK N+ + F +E+ N K N
Sbjct: 126 VGHKIDKESK-RVVSTEEGECFAEAHNMMFIETSAKVLCNIEEAFISVAEEVTNAWKEEN 184
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 79.0 bits (186), Expect = 3e-15
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSH 66
++VV G GVGKSS + RF ++ S+ TI ++ + ++ N +Q+ DT G
Sbjct: 897 FKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQE 956
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD- 125
+F ++ + K ++ Y V++ S LK +++E G E + M+ GNK D
Sbjct: 957 RFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEE--GAE-EGVAKMVLGNKTDL 1013
Query: 126 -ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
E E R V +G+ A + +METSAKT +N+ + +L
Sbjct: 1014 AEDEESRVVKTIDGKNLANQYDALYMETSAKTGNNIQEAMYKL 1056
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 78.6 bits (185), Expect = 3e-15
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIE-DTYRQVISSNKTICTLQITDTTGSH 66
++V+V G VGKSSL+ RF F TI D + + LQ+ DT G
Sbjct: 11 FKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEE 70
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
++ A+ R +LV+ VS ++S + ++ W + E V + +L GNKCD+
Sbjct: 71 KYRALSRSFFRGADGALLVFDVSVKESFDSIRDYW--LHEFHKVSGSDTITILVGNKCDK 128
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
++VS + Q + + +S++ETSAK N NV + F+ +
Sbjct: 129 KD--KKVSEEDIQNLSSCYNLSWLETSAKDNTNVNEAFEAM 167
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 76.2 bits (179), Expect = 2e-14
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 59 ITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVM 118
I DT G ++ AM+ + G F+ V++V++ +S E++ + IK +K E +P++
Sbjct: 281 ILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAE--EVPMV 338
Query: 119 LAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
L GNKCD P+ R VS S+ Q A+++ + F ETSAKT V F L+
Sbjct: 339 LVGNKCD-LPQ-RTVSTSDAQELAKSYNIPFQETSAKTRQGVDDAFYTLV 386
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 75.4 bits (177), Expect = 3e-14
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 15/169 (8%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
++V+ G G GK+ L++ F K F E Y+PT+ + Y I + L + DT G +
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 5990
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD--- 125
++ LS ++ +S+ S SLE + W E+K PN+P++L GNK D
Sbjct: 5991 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKW--TPEVKHF-CPNVPIILVGNKKDLRM 6047
Query: 126 ------ESPEIRE--VSASEGQAQA-QAWGVSFMETSAKTNHNVTQLFQ 165
E ++++ V EG+A A + +++E SAKT V ++F+
Sbjct: 6048 DENTKRELQKMKQEPVKIEEGRAMADKISAYAYLECSAKTKDGVREVFE 6096
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 73.3 bits (172), Expect = 1e-13
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSH 66
++V+V G GVGK+SL+ RF KG F ++ T+ D +V+ + LQ DT G
Sbjct: 12 FKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
+F + + A ILV+ +++R + + P W + ++ NI +L GNK D
Sbjct: 72 KFRGITQSYYRNADAVILVFDITNRGTFASI-PQW--LMNVQKYTNKNILKVLVGNKTDL 128
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
R+V+ A+ + ++ETSAK + NV L EL
Sbjct: 129 KGASRKVNTRSAANLAEFEELLYLETSAKWDDNVEVLIAEL 169
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 72.5 bits (170), Expect = 2e-13
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 11/170 (6%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPT--IEDTYRQVISSNKTICTLQITDTTGS 65
+++V+ G VGKSS +LR + F + T ++ + ++ KT LQ+ DT G
Sbjct: 443 FKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYA-LQLWDTAGQ 501
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F ++ + K +L+Y V+ S +++ + I+E P +P+ML GNK D
Sbjct: 502 ERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEE--SCSKP-VPIMLCGNKID 558
Query: 126 ----ESPEIREV-SASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNM 170
+ E + V +A G A+ G F+ETS+K N N+ + EL M
Sbjct: 559 IRQSAAAENKTVITAESGSRLAKEHGALFIETSSKENKNIAEACIELARM 608
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 72.1 bits (169), Expect = 3e-13
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
++VV G GGVGKS+ ++ F YIPT+ D Y I + + + DT G +
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQEDY 66
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESP 128
++ LS F++ + + SR S E ++ W + E+ +P P +L GNK D
Sbjct: 67 DRLRPLSYPMTDVFLVCFDIGSRTSFENIESKW--LPELNH-HMPETPKILVGNKRDLRS 123
Query: 129 EIREVSAS-----------EGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNM 170
+ S S EG+A A+ G+ ++E S+ T V + + +
Sbjct: 124 AQQNTSLSNHRSRDPITYEEGKALAKRLGMQYLENSSLTQDGVKDVMSAAIRV 176
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 71.7 bits (168), Expect = 4e-13
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTT 63
Q +VV+ G GVGKS+L +RF+ F Y T+E TYRQ + +++TDT
Sbjct: 858 QGRIVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTA 917
Query: 64 GSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIK 108
G + PA + G F+++YS++SR S +E I IK+ K
Sbjct: 918 GENS-PAKLERCLEIGEVFVVLYSITSRHSFDEASRIGTYIKKEK 961
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 70.5 bits (165), Expect = 9e-13
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQ 67
YR+ + G GVGK++L++RF+ F Y PTIED YR+ I+ + TL+I DT Q
Sbjct: 6 YRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASRGQ 65
Query: 68 FPAMQR-LSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPN------------ 114
R + +G FI+VYS + R + L +K + LP+
Sbjct: 66 NSCKLRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKLSRDTNLPSNRTRDTRPDSCP 125
Query: 115 --------------IPVMLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSA 154
I V++ GNK D E R+V+ EGQ A+ +G F E SA
Sbjct: 126 GLNEQTHDGLSKDAISVLVIGNKSDLIGE-RDVTRDEGQRLAETYGWLFAEASA 178
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 70.5 bits (165), Expect = 9e-13
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
Y++V+ G GVGKSSL+ RF + F TI E R + K I Q+ DT G
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGK-IIKAQVWDTAGQ 71
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
++ A+ +LVY ++ +++ ++++ W + E++ P I VML GNKCD
Sbjct: 72 ERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVER-W--LLEVREHADPTIVVMLVGNKCD 128
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+R V++ + + G++F+E SA + +L LL
Sbjct: 129 -LKHLRAVASDDAKKYGDEHGLAFIEASALDAKMLRKLSNRLL 170
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 66.5 bits (155), Expect = 2e-11
Identities = 56/167 (33%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 16 GGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSHQFPAMQRL 74
GGVGKSSL+ RFV G F TI + + + + TLQI DT G +F +++
Sbjct: 220 GGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRTP 279
Query: 75 SISKGHAFILVYSVSSRQSLEELKPIW--QTIKEIKGVELPNIPVMLAGNKCDESPEIRE 132
+LVY+V +S L +W + + + N P +L GNK D E R
Sbjct: 280 FYRGSDLCLLVYAVDDAKSFTNLS-MWKKEFLYYADVRDQDNFPFILLGNKVD--VEGRA 336
Query: 133 VSASEGQAQA-QAWGVSFMETSAKTNHNVTQLF----QELLNMEKNR 174
VS E + Q GV + ETSAK + NV F + L ++E+N+
Sbjct: 337 VSQEEADSWCRQNGGVPYFETSAKDSTNVNDAFIAAVKRLNSLEQNK 383
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 65.3 bits (152), Expect = 3e-11
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
+ VV G G VGK+ L++ + F Y+PT+ D Y + TL + DT G +
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
++ LS + F++ +SV S S E +K W + EI P P +L G + D
Sbjct: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKW--VPEITH-HCPKTPFLLVGTQVD 118
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 59 ITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVM 118
I DT G +F ++ L A ILVY ++ + L+P W I+E++ +I +
Sbjct: 13 IWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRP-W--IRELQRYGPQDIVIA 69
Query: 119 LAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
+AGNKCD++ + R+V + Q A + F ETSA T+ NV LF+EL
Sbjct: 70 VAGNKCDKADQ-RDVQVQDAQDFAGSVDAIFAETSALTSKNVHWLFEEL 117
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 63.3 bits (147), Expect = 1e-10
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTI-CTLQITDTTGSHQ 67
++ + G G VGK++L + TF YIPT D Q + I + D+ G
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGED 67
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD-- 125
F ++ L F++ + ++ R S E + W + E+ P +P +L GNK D
Sbjct: 68 FDRLRPLGYPNTDIFLVCFDIAHRASFENVALRW--LPELDHFS-PGVPRVLVGNKKDLR 124
Query: 126 ------ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKN 173
+S I VS EG+ AQ + + ++E SA N NV ++ + + ++
Sbjct: 125 PKQDQEDSHSIDFVSYEEGKEAAQNFKMQYIENSALLNENVKEVITTSIRIARD 178
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
++ V G VGKSSL ++FV+G F +SY PTIE+T+ + I L++ DT G ++
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTAGQDEY 67
Query: 69 PAMQRLSISKG-HAFILVYSVSS 90
+ S S G H +ILVY+V+S
Sbjct: 68 SIFPQ-SYSMGIHGYILVYAVTS 89
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 57 LQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIP 116
LQI DT G +F + +LVY V++ +S + W +K+I ++
Sbjct: 7 LQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISK-W--LKKIDDHANEDVK 63
Query: 117 VMLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
ML GNKCD + R +S ++G+ A ++G+SF+ETSA +N NV + F
Sbjct: 64 RMLVGNKCDMYDK-RVISQTKGEQLASSYGISFIETSALSNINVEKSF 110
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 60.1 bits (139), Expect = 1e-09
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 57 LQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIP 116
LQI DT G +F ++ R +LVY +SSR++ L W T + + + PNI
Sbjct: 146 LQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTN-WLT--DARTLASPNIV 202
Query: 117 VMLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
++L GNK D + REV+ E AQ + F+ETSA T NV + F
Sbjct: 203 IILVGNKKDLDAD-REVTFLEASRFAQENELMFLETSALTGENVEEGF 249
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 59.7 bits (138), Expect = 2e-09
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 14 GAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSHQFPAMQ 72
G GG GK++ V R + G F + YI T+ + + + +++ + DT G +F ++
Sbjct: 39 GDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGLR 98
Query: 73 RLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIRE 132
+G I+++ V+SR + + + P W ++++ V NIP++L GNK D R+
Sbjct: 99 DGYYIQGQCAIIMFDVTSRVTYKNV-PNWH--RDLERV-CENIPIVLCGNKVDIKD--RK 152
Query: 133 VSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
V A + + + + SAK+N+N + F
Sbjct: 153 VKAKAITFHRKK-NLQYYDLSAKSNYNFEKPF 183
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 17/119 (14%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRE-SYIPTIEDTYRQVISSNKTICTLQITDTTGSH 66
+R+ V G+GGVGKSS+ +R++K F E Y + D +++ DT G
Sbjct: 2599 FRLCVVGSGGVGKSSVTIRYLKNEFTEIDYCGKLYD--------------IEVVDTAGQE 2644
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPI-WQTIKEIKGVELP-NIPVMLAGNK 123
++ + + S++ G AF+++++++S S ELK + + I+E + IP+++ GNK
Sbjct: 2645 EYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTTCTIPMVIVGNK 2703
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSHQ 67
++++ G GVGKSSL+LRF TF TI ++ + ++ L I DT G +
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
F + ILVY +SR++ ++L+ W E+ + +I ML GNK D+
Sbjct: 70 FRTLTPSYYRGAQGVILVYDTNSRETFDKLEE-WLNEVEMYSTK-KDIVKMLVGNKIDK 126
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 54.8 bits (126), Expect = 5e-08
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSH 66
+++++ G VGK+ L R G F E TI D + + + N LQ+ DT G
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 67 QF-PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F +M +A + +Y ++ + S E L W ++ ++P +L GNKCD
Sbjct: 107 RFRKSMVCHYYRNVNAVVFMYDITRKCSFEAL-TTW-IVEYRHHAYSGDVPKILIGNKCD 164
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQL 163
E R VS++ + A + + E S K + + Q+
Sbjct: 165 LGLE-RTVSSNIARKFADSHNMPLWEISIKNDAELEQI 201
>SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 54.8 bits (126), Expect = 5e-08
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 71 MQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEI 130
M+ SI G AF+LVYS++S QS ++ I Q + ++ + + + + NK D +
Sbjct: 80 MKEASILWGDAFLLVYSITSLQSFTDISCIIQQLTAMR-TQGSHALLAIVANKTDAESQ- 137
Query: 131 REVSASEGQAQAQAWGVSFMETSAKTNH-NVTQLFQELL 168
REVS S+G A AQ+ SF E S T++ +V ++F E++
Sbjct: 138 REVSTSDGVALAQSLPCSFSEISTSTSYEDVERVFTEII 176
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 1 MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQI 59
M + S +++++ G VGK+ LV +F KG F + PTI D + + + LQI
Sbjct: 1 MDDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQI 60
Query: 60 TDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVML 119
DT G +F ++ + I+ Y +++++S E L P W + + ++ + +
Sbjct: 61 WDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESL-PQW--LDDTNRYTSKDVLIAI 117
Query: 120 AGNKCDES 127
GNK D S
Sbjct: 118 VGNKSDLS 125
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 54.0 bits (124), Expect = 9e-08
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 71 MQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEI 130
M+ + G FI++YS++ R S I+ ++ + +IP++L GNK D+
Sbjct: 1 MREQYMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTD--DIPIVLVGNK-DDLEGK 57
Query: 131 REVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
REV+ EGQ A + F ETSA H V F L+
Sbjct: 58 REVTTQEGQELAHRFDCPFFETSACQRHFVDDAFHGLV 95
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 54.0 bits (124), Expect = 9e-08
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 43 TYRQVISSNKTICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQ 102
TY + + + L I DT G+ + I G F++VYS++ S E + + +
Sbjct: 3 TYEKELRIGDSSMELDILDTAGNGEASY-----IHNGDGFVVVYSITDYYSYEMARQLVK 57
Query: 103 TIKEIKGVE-LPNIPVMLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVT 161
+ +++ + + IP++L GNK D R V+ E + A +G S ETSA TN NV
Sbjct: 58 LVTQVRKTDDICQIPIVLVGNKRDLRRG-RCVAKDEAREFASEYGCSHYETSALTNRNVH 116
Query: 162 QLFQEL 167
+F +
Sbjct: 117 VIFYNM 122
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 83 ILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQA 142
+LVY ++ ++ + + + I+E ++ M+ GNKCD R VS G+ A
Sbjct: 129 MLVYDITQEKTFDNISKWLRNIEEHANEDVEK---MILGNKCDMDDR-RIVSRERGEQIA 184
Query: 143 QAWGVSFMETSAKTNHNVTQLFQEL 167
+ G+ F+ETSAKTN N+ Q FQ L
Sbjct: 185 REHGIRFLETSAKTNINIEQAFQYL 209
Score = 34.3 bits (75), Expect = 0.075
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 1 MPEQSNDY--RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIED 42
M ++S DY ++++ G GVGK+ ++ RF F ++I TIE+
Sbjct: 1 MAKKSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIEN 44
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGS--H 66
RVVV G GVGKS+L +RF+ F Y T+E T+R ++ + +L I+DT G
Sbjct: 18 RVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTAGEVRV 77
Query: 67 QFPAMQRLS 75
++P + R+S
Sbjct: 78 RYPNLGRIS 86
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 106 EIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQ 165
++K N V+L GNKCD E R VS G+ A G+ F ETSAK N NV ++F+
Sbjct: 4 QVKTYSWANAQVILVGNKCDMEEE-RVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVFE 62
Query: 166 ELLNM 170
L+++
Sbjct: 63 RLVDI 67
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 91 RQSLEELKPIWQTIKEIKGVELP---NIPVMLAGNKCDESPEIREVSASEGQAQAQAWGV 147
+ + ++ QT K I V ++ +ML GNK D S + R+V+A EG+ +A+ V
Sbjct: 5 KNNAQDYNSFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDK-RQVTAEEGERKAKELNV 63
Query: 148 SFMETSAKTNHNVTQLFQEL 167
F+ETSAK +NV QLF+ +
Sbjct: 64 MFIETSAKAGYNVKQLFRRV 83
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 50.0 bits (114), Expect = 1e-06
Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPT---IEDTYRQVISSNKTICTLQ 58
P +++ ++ G GVGKS LV + F ++ + + D + + + L
Sbjct: 345 PNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLT 404
Query: 59 ITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVM 118
I DT G ++ ++ LV+ ++ + +L + G + NI ++
Sbjct: 405 IGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGAD-SNIQLI 463
Query: 119 LAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNM 170
L GNK D R V+ S + A G ++ETSAK ++ +F+++L +
Sbjct: 464 LVGNKKDMEDN-RAVTYSRAKEFAAMNGFPYIETSAKDVDSLMDMFKKMLQL 514
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQFP 69
V++ G GK++L+ +V+ F E Y T+ ++ + + L + DT+G +
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWDTSGHEDYD 294
Query: 70 AMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPE 129
++ LS + ++ + +S ++ + + W I E+ + PN PV+L G K D E
Sbjct: 295 HVRPLSYNNVDIVLICFDISRPKTADSILEKW--IIEVCDL-CPNKPVLLVGCKQDLRSE 351
Query: 130 IREVS 134
+ VS
Sbjct: 352 VNIVS 356
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 48.4 bits (110), Expect = 4e-06
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 32 FRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSVSS 90
F SYI TI ++ + I+ + LQI DT G +F + H I+VY V+S
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 91 RQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQAQAWGVSFM 150
+ +K W + EI ++ +L GNK D+ P + V ++ Q + +
Sbjct: 62 ADTFVNVKR-W--LHEI-DQNCDDVIRILVGNK-DDCPSKKVVETADLQKFGEQMNIRVF 116
Query: 151 ETSAKTNHNVTQ 162
ETSAK N NV +
Sbjct: 117 ETSAKENINVEE 128
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 118 MLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLN 169
+L GNKC E REVS +EG+ A+ G+ F ETSA+ N NVT F+ L++
Sbjct: 12 VLVGNKCHLDCE-REVSVAEGRGLAKELGLPFFETSAEKNINVTDCFEALVD 62
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 47.6 bits (108), Expect = 7e-06
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITD 61
PE +VV G VGK+S + F +I +I D Y + + + T+ + D
Sbjct: 4 PELDPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCD 63
Query: 62 TTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAG 121
T G+ + F+L + +++R+S ++ W + + +E ++P +L G
Sbjct: 64 TPGTMHPRIPPQHWFQYASVFLLCFDIANRESFANIESTW--LPHV-NLETSDVPKVLVG 120
Query: 122 NKCD------ESPEIRE----VSASEGQAQAQAWGVSFMETSAK 155
NK + ES ++ + V +E +A A + ++E SAK
Sbjct: 121 NKMELRCSQQESTDLGQTHDCVPFTEAKALACKSNIPYVENSAK 164
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 47.2 bits (107), Expect = 1e-05
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 11/170 (6%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIE-DTYRQVISSNKTICTLQITDTTGSH 66
++VV+ G GVGK+SL R + F TI D+ + + + TL + DT G
Sbjct: 12 FKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVE 71
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
+F + + HA IL+++V SL+ L E P+ +L NK D
Sbjct: 72 RFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEF----CPDALKVLVANKIDL 127
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNV----TQLFQELLNMEK 172
++ S E A + ++F SAKT + TQ+ + LL K
Sbjct: 128 DEQVTTESV-ELFASSHECHLTF-RISAKTGEGIGKACTQIAKALLRENK 175
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/99 (23%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 3 EQSNDY--RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQI 59
+Q+ DY ++++ G VGK+S + R+ +F +++ T+ ++ + + N LQI
Sbjct: 15 DQNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQI 74
Query: 60 TDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELK 98
DT G ++ + FIL+Y +++ +S + ++
Sbjct: 75 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAVQ 113
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 83 ILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQA 142
+LVY +++ S K I Q ++ I+ PN+ +L GNK D E R + A G++
Sbjct: 6 LLVYDITTEDSF---KHISQWLQNIEDNASPNVCKVLLGNKLDAEDE-RVIDAQRGRSVG 61
Query: 143 QAWGVSFMETSAKTNHNVTQLFQELLNMEKNR 174
+ + F E SA+T NV Q F + K +
Sbjct: 62 EDNNLEFYEASARTGENVQQAFMAVARKIKEQ 93
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 5 SNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISS 50
S Y +VV GA GVGK++LV+RFV G F Y PT+ + R ++
Sbjct: 322 SEKYSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLGEHARTTFTA 367
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 45.2 bits (102), Expect = 4e-05
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 24/173 (13%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTG--SHQ 67
V V G GVGKS+ +R + F Y P +E Y+ + + L + DT G S +
Sbjct: 184 VAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLDTAGKVSRE 243
Query: 68 FPAMQRLSISKGHA-------------------FILVYSVSSRQSLEELKPIWQTIKEIK 108
R G + L+YS + ++S E + I + + E K
Sbjct: 244 ARMSPRQKTKTGQLAPTGNSEEKLERASENTEIYFLLYSTTDKRSFTEAEEIAEYLFETK 303
Query: 109 GVELPNIPVMLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVT 161
++ P+ ++A K + +REV EG+ AQ +G +F + S ++ T
Sbjct: 304 NID-PSTLTIVATKK--DLVHMREVDEYEGRFLAQNYGCAFAQISISEHYTET 353
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 64 GSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNK 123
G +F + H ++VY ++ R+S L W + E++ + ++L GNK
Sbjct: 377 GQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHK-W--LMEVETYASEGVHMILVGNK 433
Query: 124 CDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
D + REV Q A + F+ETSAK NV + F
Sbjct: 434 IDLDTD-REVQPDAAQEWAALHDMPFVETSAKGAKNVKEAF 473
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTF--RESYIPTIEDTYRQVISSNKTICTLQITDTTGS 65
Y++ + G GVGK+S+ R F E + I+ + ++ + + DT G
Sbjct: 9 YKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGM 68
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
++ ++ R S ++VYS+ SL ++K Q+ + V P ++L NK D
Sbjct: 69 EEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQ----VNAPAAKIVLVANKMD 124
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 83 ILVYSVSSRQSLEELKPIW-QTIKEIKGV--ELPNIPVMLAGNKCDESPEIREVSASEGQ 139
+LVY V+SR+S E L IW IK+ G + ++ ++ NK D + V SEG+
Sbjct: 18 LLVYDVTSRESFEALD-IWLDEIKKDIGSPSDFNSVVFVVCANKVDSRKRL--VEESEGR 74
Query: 140 AQAQAWGVSFMETSAKTNHNVTQLFQEL 167
A+ + ETSA+T + ++FQ L
Sbjct: 75 QWAENHKFCYFETSAQTGDGIPEVFQTL 102
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 42.3 bits (95), Expect = 3e-04
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 23 LVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQFPAMQRLSISKGHAF 82
L +RF+ F Y P +E +YR ++ + + + DT G + + L + +
Sbjct: 2 LTVRFITRRFIGEYDPCLEASYRHHLTVHGQYIAMDVVDTAGKNTPDKVDAL-LEAANIV 60
Query: 83 ILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQA 142
L+YSV+ R S EE + + I++ K + +A NK + + +V EG+ A
Sbjct: 61 YLLYSVTDRASFEEAAWLARRIQQNKAI--------VATNK--DLKHLSQVLEYEGRFLA 110
Query: 143 QAWGVSFMETSAKTNH-NVTQLFQELLNMEKNRNV 176
Q F++ S + V +L +E + R+V
Sbjct: 111 QELDGLFVQVSISEGYVEVQELLEEGIKTWLQRDV 145
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 57 LQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIP 116
LQI DT G +F + + + I+ Y ++ + K + + ++++ N
Sbjct: 97 LQIWDTAGQERFRTITQSYYRSCNGVIIAYDITK---CDTFKNVIRWGEDVQKYAPENAI 153
Query: 117 VMLAGNKCDESPEIREVSASEGQAQAQAWGV-SFMETSAKTNHNVTQLFQELLNMEKNR 174
+L GNK D E REVS + A +G+ +ETSAK N+ F L KNR
Sbjct: 154 KLLVGNKKDLERE-REVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLARELKNR 211
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 3 EQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQIT 60
+ + +++V+V G GK S V R+V + Y PTI + + + + T LQI
Sbjct: 14 QYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIW 73
Query: 61 DTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLE-ELKPIWQTIKEIKGVELPNIPVML 119
G +F +M R+ A ++++ + + +L+ +K + K +P +L
Sbjct: 74 LIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCIL 133
Query: 120 AGNKCD 125
GNK D
Sbjct: 134 VGNKSD 139
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 41.9 bits (94), Expect = 4e-04
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 9 RVVVFGAGGVGKSSLVLR-------------FVKGTFRES--YIPTIEDTYRQVISSNKT 53
++V+ G G+GKS+L+ + F TF S Y PT Y + SN T
Sbjct: 7 KLVLVGDAGIGKSTLIAKCHETHPTSAECGGFFAKTFDRSAEYKPTALKAYSTNVYSNPT 66
Query: 54 -----ICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIK 108
+ I DT GS ++ L+ FIL + V++R S E + W EI+
Sbjct: 67 GVVYSVYQANIVDTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKW--FPEIR 124
Query: 109 GVELPNIPVMLAGNKCDESPEIREVSASEGQ 139
E +P+ML G K E R+VS ++ +
Sbjct: 125 LYE-KKVPLMLVGLK-PNPVEKRKVSKADAE 153
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 83 ILVYSVSSRQSLEELKPIW-QTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQ 141
++V+ V+ R+S E + P W ++E G E IPV+L GNK D ++ ++
Sbjct: 50 VIVFDVTDRKSFERV-PTWLDKVQEHCGHE---IPVVLVGNKTDRPLNSWKIPSNVAAKY 105
Query: 142 AQAWGVSFMETSAKTNHNVTQLFQELLNM 170
A G ++ETSA N+ ++F LL +
Sbjct: 106 ATNNGFLYIETSALGMCNIDEIFAILLEL 134
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 40.7 bits (91), Expect = 9e-04
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 76 ISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSA 135
++ G AF+L+YS++SR+S + + + + +E + V+LA NK D + R+V
Sbjct: 1056 VTWGDAFVLIYSITSRESFHAVWNYYYHV--VTSIEAKPVIVLLA-NKHDLGHK-RKVLT 1111
Query: 136 SEGQAQAQAWGVSFMETSA 154
+EG+ AQA F E SA
Sbjct: 1112 TEGRQMAQAIKCPFYEVSA 1130
>SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06)
Length = 138
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 57 LQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPI-WQTIKEIKGVELP-N 114
+++ D+ G ++ + + S++ G AF+++++++S S ELK + + I+E K
Sbjct: 25 IEVVDSAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHKESNTTCT 84
Query: 115 IPVMLAGNK 123
IP+++ GNK
Sbjct: 85 IPMVIVGNK 93
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 117 VMLAGNKCDESPEIREVSASEGQAQAQAWG-VSFMETSAKTNHNVTQLFQEL 167
++L GNKCD E R V +GQ A+ + +F+ETSAK NV ++F +L
Sbjct: 1 MVLVGNKCDLEDE-RVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIFYDL 51
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 83 ILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQA 142
+LVY ++ S L W ++E++ ++ ++L GNK D +R + G+ A
Sbjct: 20 VLVYDIAKGTSFMNLNK-W--VEELRQHASDDLSIILIGNKSDLK-HLRMIENRRGKQFA 75
Query: 143 QAWGVSFMETSAKTNHNVTQLFQ 165
G+ FMETSA + NV + F+
Sbjct: 76 AEHGMLFMETSALDSTNVAEAFE 98
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 19 GKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQFPAMQRLSISK 78
GK++ V G F E IPT+ R+V N TI ++ D G +F +M
Sbjct: 32 GKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNVTI---KVWDIGGQPRFRSMWERYCRG 88
Query: 79 GHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+ + + + LE K + ++ +L IP+++ GNK D
Sbjct: 89 VNCIVYMVDAADHDKLEASKNELHNL--LEKPQLAGIPILVLGNKKD 133
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 38.7 bits (86), Expect = 0.003
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 33/173 (19%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQ 67
++V+V G GVGK+SL+ R+V F Y T+ ++ + + + D T +
Sbjct: 672 FKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVS---FNIVYYKEAVGAFIVFDVTRAST 728
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
F A+Q+ + ++ L +PI P +L NKCD++
Sbjct: 729 FSAVQKWK----------NDLDNKLQLPSGEPI---------------PAVLLANKCDQA 763
Query: 128 PE-IREVSASEGQAQAQAWGVSFMETSAKTNHNVTQ----LFQELLNMEKNRN 175
E + SA + A + + ETSAK + NV + L ++L EK N
Sbjct: 764 KEGLVNNSAQMDEYCADKGFIGWFETSAKEDVNVNEAAKFLVSKILQNEKENN 816
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 10 VVVFGAGGVGKSSLVLRFVKGTFRESYIPTIED 42
+ V G G VGKSSL+ F F+E Y+PTIE+
Sbjct: 30 IAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEE 62
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 9 RVVVFGAGGVGKSSLVLR--FVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSH 66
R+V+ G VGK+ L+L+ + T ++ +I + Y I + + L++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCDV---D 76
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
S F L +SV S ++ W E+K PN P+++ G K D
Sbjct: 77 NLDTKISKPFSDTDVFCLCFSVGDMDSFRHVENKWYA--EVKNCS-PNSPIIVVGTKTD 132
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 38.3 bits (85), Expect = 0.005
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 8/169 (4%)
Query: 8 YRVVVFGAGGVGKSSLV--LRFVKGTFRES--YIPTIEDTYRQVISSNKTICTLQITDTT 63
Y+VV+ G GVGKS ++ L ++ S Y PT +SN C L + DT+
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHASYFTASNS--CHLYLLDTS 71
Query: 64 GSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNK 123
G ++ + ++ + + ++++ SL L+ ++ + + + G K
Sbjct: 72 GLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLDVFLGDSSRVLKFVLGCK 131
Query: 124 CDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEK 172
D E ++ + + A G TSA T NV F+ + + K
Sbjct: 132 IDTQHE-ADIQ-PKAEDFASRIGAELSITSAITGTNVNDFFERIADKLK 178
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQ--VI----------SSNKTICT 56
+ + G GVGK+SL+ ++ F ++PTI +R+ V+ S+
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIH 167
Query: 57 LQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELK 98
LQ+ DT G +F ++ F+LV+ ++ QS ++
Sbjct: 168 LQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIR 209
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 118 MLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLN 169
+L GNK D + R V +E +A A G+ + ETSA T NVT+ + LL+
Sbjct: 470 VLLGNKADLEDD-RVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLD 520
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 78 KGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASE 137
KG +LVY ++ R+S + L+ W ++ I+ +L ++L GNKCD + REV +
Sbjct: 55 KGWGILLVYDITCRKSFDNLQ-FW--LESIRKNKLQYEEILLVGNKCDVGDD-REVPKRK 110
Query: 138 GQ 139
G+
Sbjct: 111 GE 112
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 119 LAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLN 169
L GNK D + R V +E +A A G+ + ETSA T NVT+ + LL+
Sbjct: 2 LLGNKADLEDD-RVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLD 51
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 7 DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDT 62
D+++ + G VGK+SL+ K F +IPTI+D ++ + + + DT
Sbjct: 187 DFKMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDDYIIHALNQDGVHYNVCLVDT 242
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI 40
++V++ G VGK+S V R+V G R Y PTI
Sbjct: 23 FKVLIVGDATVGKTSFVQRYVHGNTRREYKPTI 55
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 33.9 bits (74), Expect = 0.099
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDT 62
++VV+ G GVGKS+L+ RF + F TI E R + KTI QI DT
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI-KAQIWDT 67
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 33.1 bits (72), Expect = 0.17
Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 9 RVVVFGAGGVGKSSLVLR-FVKG-------TFRESYIPTIEDTYRQVISSNKTICTLQIT 60
++ V G VGK+ ++ R F++ T IP +++++ S ++ +
Sbjct: 10 KLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVTYW 69
Query: 61 DT-----TGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNI 115
DT T ++ L FI+ + +++ S + + +W + E+K +P
Sbjct: 70 DTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVW--VPELKHY-MPET 126
Query: 116 PVMLAGNKCDESPEIREVSA 135
PV++ GNK D R ++A
Sbjct: 127 PVLVVGNKKDMRTNTRALTA 146
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 31.9 bits (69), Expect = 0.40
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 16/122 (13%)
Query: 61 DTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLA 120
DT G ++ + A I+ Y ++ SL+ L + + ++ E PN V++
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLND--RHLHLLQAAE-PNCLVVIV 334
Query: 121 GNKCD-ESPEIREVSASEGQAQAQAWG------------VSFMETSAKTNHNVTQLFQEL 167
G K D + + RE++ + G A+ F ETS+KT V +F+ +
Sbjct: 335 GCKKDLVTDDTREITEAAGMELAKVQNELKSRSLLSLKRTPFFETSSKTGDGVDNVFEFI 394
Query: 168 LN 169
L+
Sbjct: 395 LS 396
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 131 REVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
R +S+ EGQ A+A + + ETS+ V ++F +LL
Sbjct: 44 RVISSKEGQKWARAQDLKYYETSSANGQGVYEMFNDLL 81
>SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05)
Length = 138
Score = 31.9 bits (69), Expect = 0.40
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 82 FILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQ 141
F+++YS+ R S +E I + +K K E + +L G K D +RE+ +EG
Sbjct: 2 FLILYSIVDRTSFDEASRIARYLKWRKFPETGVL--ILIGTKRDLG-HLREIDETEGSEL 58
Query: 142 AQAWGVSFMETSAKTNHNVTQL 163
A+ F E SA T +
Sbjct: 59 AEELECPFYELSASEYEGYTDV 80
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 83 ILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQA 142
+LVY ++ + E ++ W +KE++ NI +ML GNK D +R V E +A A
Sbjct: 10 LLVYDIAKHLTYENVER-W--LKELRDHADSNIVIMLVGNKSD-LRHLRAVPTDEAKAFA 65
Query: 143 QAWGV 147
+ + +
Sbjct: 66 EIYHI 70
>SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22)
Length = 559
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/41 (26%), Positives = 25/41 (60%)
Query: 71 MQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVE 111
M+ L + G F+LVYS++++ + +L+ + + I +K +
Sbjct: 1 MRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTD 41
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI 40
RVVV G GVGKS+L +R + F Y T+
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTL 49
>SB_39298| Best HMM Match : Ras (HMM E-Value=0.11)
Length = 64
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 75 SISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
SI AFI+VYS++ + S + + + KG + + V L GNK D
Sbjct: 9 SIRWADAFIVVYSITDKNSFNTAVQLVEAVYYGKGTD--EVHVALVGNKTD 57
>SB_51520| Best HMM Match : Flavoprotein (HMM E-Value=1.4)
Length = 215
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 3 EQSNDY---RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQI 59
++++DY R+VV G GG GKS ++ R ++ R+ ++ +D + V + T +Q
Sbjct: 81 DEADDYVPLRLVVSGTGGTGKSYMI-RCIQRLVRQVFVK--KDAVQVVTPTGNTAFLVQG 137
Query: 60 TDTTGSHQFPAMQR 73
T + P R
Sbjct: 138 TTASWFFSLPTCGR 151
>SB_50367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1498
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/58 (20%), Positives = 28/58 (48%)
Query: 34 ESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSR 91
+S++P++ D YRQ++ + + + H+ +M+ L + HA + + R
Sbjct: 1160 DSFVPSVMDRYRQLLLPALQVISTILASLGPQHREASMKVLGVVVSHADVFTSILQDR 1217
>SB_43287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/58 (20%), Positives = 28/58 (48%)
Query: 34 ESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSR 91
+S++P++ D YRQ++ + + + H+ +M+ L + HA + + R
Sbjct: 17 DSFVPSVMDRYRQLLLPALQVISTILASLGPQHREASMKVLGVVVSHADVFTSILQDR 74
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 27.9 bits (59), Expect = 6.5
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDT-------YRQVISSNKTICTLQITD 61
R+ V G GVGK+SLV S TI T Y++ + KT L+ D
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTF-FLEFWD 66
Query: 62 TTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELK 98
GS + + + + ILV+ +++R+S L+
Sbjct: 67 IGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLR 103
>SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 872
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Query: 3 EQSNDY---RVVVFGAGGVGKSSLV 24
EQ++DY R+VV G GG GKS ++
Sbjct: 285 EQADDYVPLRLVVSGTGGTGKSYMI 309
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 119 LAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQ 162
L G + ++ + V+A E + A+ + + +METSA + H + +
Sbjct: 246 LTGKEIQDAKKDSIVTAKEAKLLAKKYDLPYMETSALSRHAIQE 289
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,771,788
Number of Sequences: 59808
Number of extensions: 201181
Number of successful extensions: 578
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 447
Number of HSP's gapped (non-prelim): 102
length of query: 209
length of database: 16,821,457
effective HSP length: 79
effective length of query: 130
effective length of database: 12,096,625
effective search space: 1572561250
effective search space used: 1572561250
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -