Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000303-TA|BGIBMGA000303-PA|IPR005225|Small GTP-binding
protein domain, IPR013753|Ras, IPR003577|Ras small GTPase, Ras type,
IPR003579|Ras small GTPase, Rab type, IPR003578|Ras small GTPase, Rho
type, IPR001806|Ras GTPase
(209 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59840.1 68418.m07503 Ras-related GTP-binding family protein ... 96 1e-20
At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putati... 96 1e-20
At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putati... 95 4e-20
At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small GTP... 95 4e-20
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 95 4e-20
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 94 5e-20
At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small GTP-... 93 9e-20
At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small GTP... 93 9e-20
At3g54840.1 68416.m06076 Rab GTPase (ARA6) identical to small GT... 93 1e-19
At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putati... 92 2e-19
At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putati... 92 2e-19
At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putati... 90 1e-18
At4g39890.1 68417.m05651 Ras-related GTP-binding family protein ... 89 3e-18
At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putati... 88 4e-18
At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putati... 88 4e-18
At1g18200.1 68414.m02264 Ras-related GTP-binding family protein ... 88 4e-18
At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putati... 86 1e-17
At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putati... 84 6e-17
At1g73640.1 68414.m08525 Ras-related GTP-binding family protein ... 84 6e-17
At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putati... 84 8e-17
At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2) id... 84 8e-17
At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small GT... 84 8e-17
At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putati... 84 8e-17
At4g35860.1 68417.m05093 Ras-related GTP-binding protein, putati... 83 1e-16
At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putati... 83 2e-16
At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putati... 82 2e-16
At5g03530.1 68418.m00309 Ras-related GTP-binding family protein ... 82 3e-16
At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putati... 81 5e-16
At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putati... 81 5e-16
At3g12160.1 68416.m01516 Ras-related GTP-binding family protein ... 80 9e-16
At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putati... 80 9e-16
At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putati... 79 2e-15
At3g51300.1 68416.m05615 Rac-like GTP-binding protein (ARAC11) /... 78 5e-15
At3g15060.1 68416.m01905 Ras-related GTP-binding family protein ... 77 7e-15
At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) / ... 77 9e-15
At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putati... 77 9e-15
At2g17800.1 68415.m02063 Rac-like GTP-binding protein (ARAC1) (A... 77 9e-15
At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)... 77 1e-14
At5g45970.1 68418.m05652 Rac-like GTP-binding protein (ARAC2) id... 76 2e-14
At3g07410.1 68416.m00883 Ras-related GTP-binding family protein ... 76 2e-14
At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putati... 76 2e-14
At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putati... 76 2e-14
At4g18800.1 68417.m02776 Ras-related GTP-binding family protein ... 75 3e-14
At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / sma... 75 3e-14
At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putati... 75 4e-14
At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putati... 75 4e-14
At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9) id... 75 5e-14
At4g35950.1 68417.m05115 Rac-like GTP-binding protein (ARAC6) id... 74 6e-14
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 74 8e-14
At4g28950.1 68417.m04136 Rac-like GTP-binding protein (ARAC7) id... 73 1e-13
At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putati... 73 1e-13
At5g47960.1 68418.m05925 Ras-related GTP-binding family protein ... 73 2e-13
At1g20090.1 68414.m02514 Rac-like GTP-binding protein (ARAC4) / ... 73 2e-13
At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10) i... 72 2e-13
At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putati... 72 2e-13
At3g48040.1 68416.m05237 Rac-like GTP-binding protein (ARAC8) id... 72 3e-13
At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putati... 71 4e-13
At1g75840.1 68414.m08809 Rac-like GTP-binding protein (ARAC5) / ... 71 4e-13
At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putati... 71 4e-13
At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putati... 71 8e-13
At5g65270.1 68418.m08210 Ras-related GTP-binding family protein ... 70 1e-12
At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putati... 69 2e-12
At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 / ... 67 9e-12
At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putati... 66 2e-11
At3g16100.1 68416.m02034 Ras-related GTP-binding family protein ... 66 2e-11
At5g10260.1 68418.m01191 Ras-related GTP-binding protein, putati... 63 1e-10
At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3) ... 62 4e-10
At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein... 62 4e-10
At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein... 62 4e-10
At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putati... 61 5e-10
At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putati... 60 8e-10
At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putati... 58 4e-09
At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 53 1e-07
At1g02440.1 68414.m00192 ADP-ribosylation factor, putative simil... 52 3e-07
At3g49870.1 68416.m05452 ADP-ribosylation factor, putative simil... 47 1e-05
At5g46025.1 68418.m05660 Ras-related GTP-binding family protein ... 45 3e-05
At4g09720.2 68417.m01597 Ras-related GTP-binding protein, putati... 45 4e-05
At5g37680.1 68418.m04538 ADP-ribosylation factor, putative ADP-r... 44 8e-05
At5g67560.1 68418.m08519 ADP-ribosylation factor, putative ident... 44 1e-04
At3g49860.1 68416.m05451 ADP-ribosylation factor, putative simil... 44 1e-04
At3g63150.1 68416.m07092 GTP-binding protein-related low similar... 38 0.005
At3g05310.1 68416.m00579 GTP-binding protein-related low similar... 38 0.007
At4g08190.1 68417.m01354 Ras-related GTP-binding protein, putati... 35 0.035
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 32 0.25
At5g45160.1 68418.m05544 root hair defective 3 GTP-binding (RHD3... 31 0.43
At3g13870.2 68416.m01752 root hair defective 3 (RHD3) identical ... 31 0.43
At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical ... 31 0.43
At1g72960.1 68414.m08438 root hair defective 3 GTP-binding (RHD3... 31 0.75
At4g03156.1 68417.m00430 small GTPase-related contains weak simi... 30 1.3
At5g27410.1 68418.m03272 aminotransferase class IV family protei... 29 3.0
At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /... 29 3.0
At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /... 29 3.0
At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /... 29 3.0
At3g04680.2 68416.m00502 pre-mRNA cleavage complex family protei... 28 4.0
At3g04680.1 68416.m00501 pre-mRNA cleavage complex family protei... 28 4.0
At1g03830.1 68414.m00364 guanylate-binding family protein contai... 28 4.0
At3g42690.1 68416.m04439 Ulp1 protease family protein contains P... 28 5.3
At5g09520.1 68418.m01101 hydroxyproline-rich glycoprotein family... 27 7.0
At3g09960.1 68416.m01194 calcineurin-like phosphoesterase family... 27 7.0
At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t... 27 9.2
>At5g59840.1 68418.m07503 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 96.3 bits (229), Expect = 1e-20
Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSHQ 67
++++ G GVGKS L+LRF G+F S+I TI ++ + I + LQI DT G +
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
F + +LVY V+ S ++ W I+ I+ N+ +L GNK D
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRN-W--IRNIEQHASDNVNKILVGNKADMD 133
Query: 128 PEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVSLQXXXXXXXX 187
R V S+GQA A +G+ F ETSAKTN NV ++F + K R L
Sbjct: 134 ESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQR---LADTDSRAEP 190
Query: 188 XXXXXXETGEASAAGK 203
+T +A+ AG+
Sbjct: 191 ATIKISQTDQAAGAGQ 206
>At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB5A GI:1370178 from
[Lotus japonicus]
Length = 200
Score = 96.3 bits (229), Expect = 1e-20
Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 5/165 (3%)
Query: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY-RQVISSNKTICTLQITDT 62
+S + ++V+ G G GKSSLVLRFVK F E TI + Q ++ N +I DT
Sbjct: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
Query: 63 TGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGN 122
G ++ ++ + A I+V+ V+++ S E K W ++E++ PN+ + LAGN
Sbjct: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKK-W--VQELQAQGNPNMVMALAGN 123
Query: 123 KCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
K D + R+V+A + Q AQ G+ FMETSAKT NV ++F E+
Sbjct: 124 KSDLL-DARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167
>At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putative
very strong similarity to RAB1C [Lotus corniculatus var.
japonicus] GI:1370166; contains Pfam profile PF00071:
Ras family
Length = 202
Score = 94.7 bits (225), Expect = 4e-20
Identities = 62/178 (34%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQI 59
PE +++++ G GVGKS L+LRF ++ +SYI TI + R V KTI LQI
Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTI-KLQI 61
Query: 60 TDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVML 119
DT G +F + H I+ Y V+ +S +K Q + EI N+ +L
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVK---QWLNEIDRYASENVNKLL 118
Query: 120 AGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVS 177
GNKCD + + + VS +A A G+ F+ETSAK NV + F + K R S
Sbjct: 119 VGNKCDLTSQ-KVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMAS 175
>At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small
GTP-binding protein, putative identical to SP|P28186
Ras-related protein ARA-3 {Arabidopsis thaliana};
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 94.7 bits (225), Expect = 4e-20
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSHQ 67
++++ G GVGKS L+LRF G+F S+I TI ++ + I + LQI DT G +
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
F + +LVY V+ S ++ W I+ I+ N+ +L GNK D
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRN-W--IRNIEQHASDNVNKILVGNKADMD 133
Query: 128 PEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVSLQXXXXXXXX 187
R V ++GQA A +G+ F ETSAKTN NV ++F + K R L
Sbjct: 134 ESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR---LSDTDSRAEP 190
Query: 188 XXXXXXETGEASAAGK 203
+T +A+ AG+
Sbjct: 191 ATIKISQTDQAAGAGQ 206
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 94.7 bits (225), Expect = 4e-20
Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSHQ 67
++++ G GVGKS L+LRF TF S+I TI ++ + + + LQI DT G +
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQER 76
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
F + +LVY V+ S ++ W +K I+ ++ +L GNK D
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRN-W--MKNIEQHASDSVNKILVGNKADMD 133
Query: 128 PEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNR 174
R V S+GQA A +G+ F ETSAKTN NV Q+F + K R
Sbjct: 134 ESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQR 180
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 94.3 bits (224), Expect = 5e-20
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 4/199 (2%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSHQ 67
++++ G GVGKS L+LRF TF S+I TI ++ + + + LQI DT G +
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQER 76
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
F + +LVY V+ S ++ W +K I+ N+ +L GNK D
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRN-W--MKNIEQHASDNVNKILVGNKADMD 133
Query: 128 PEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVSLQXXXXXXXX 187
R V ++GQA A +G+ F ETSAKTN NV +F + K R
Sbjct: 134 ESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTETDTKAEPQGI 193
Query: 188 XXXXXXETGEASAAGKEKC 206
+S A K C
Sbjct: 194 KITKQDTAASSSTAEKSAC 212
>At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small
GTP-binding protein identical to Ras-related protein
RHA1 SP:P31582 from [Arabidopsis thaliana]
Length = 200
Score = 93.5 bits (222), Expect = 9e-20
Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 5/160 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY-RQVISSNKTICTLQITDTTGSHQ 67
++V+ G G GKSSLVLRFVK F E TI + Q ++ N +I DT G +
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
+ ++ + A I+V+ ++++ S E K W ++E++ PN+ + LAGNK D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFERAKK-W--VQELQAQGNPNMVMALAGNKADLL 128
Query: 128 PEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
+ R+VSA E + AQ + FMETSAKT NV +F E+
Sbjct: 129 -DARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEI 167
>At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small
GTP-binding protein, putative identical to Ras-related
protein ARA-5 SP:P28188 from [Arabidopsis thaliana]
Length = 203
Score = 93.5 bits (222), Expect = 9e-20
Identities = 65/178 (36%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQI 59
PE +++++ G GVGKS L+LRF ++ ESYI TI + R V KTI LQI
Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTI-KLQI 61
Query: 60 TDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVML 119
DT G +F + H I+VY V+ +S +K Q + EI N+ +L
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVK---QWLSEIDRYASDNVNKLL 118
Query: 120 AGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVS 177
GNK D + E R + +A A G+ FMETSAK NV Q F + K R S
Sbjct: 119 VGNKSDLT-ENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMAS 175
>At3g54840.1 68416.m06076 Rab GTPase (ARA6) identical to small
GTPase Ara6 [Arabidopsis thaliana] GI:13160603
Length = 202
Score = 93.1 bits (221), Expect = 1e-19
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Query: 1 MPEQSNDYRV--VVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY--RQVISSNKTICT 56
+P + + RV V+ G GVGKS +VLRFV+G F + T+ ++ + + + T
Sbjct: 25 VPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVK 84
Query: 57 LQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIP 116
+I DT G ++ A+ L ++VY ++S +S ++ + W +KE++ P+I
Sbjct: 85 FEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQ-YW--VKELQKHGSPDIV 141
Query: 117 VMLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
+ L GNK D E REV +G A+ G+ F+ETSAKT N+ QLF+E+
Sbjct: 142 MALVGNKADLH-EKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEI 191
>At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 92.3 bits (219), Expect = 2e-19
Identities = 58/167 (34%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSHQ 67
++++ G GVGKS L+LRF G+F S+I TI ++ + I + LQI DT G +
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
F + +LVY V+ S ++ W I+ I+ ++ +L GNK D
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRN-W--IRNIEQHASDSVNKILVGNKADMD 133
Query: 128 PEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNR 174
R V S+GQA A +G+ F ETSAKTN NV ++F + K R
Sbjct: 134 ESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180
>At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 92.3 bits (219), Expect = 2e-19
Identities = 58/167 (34%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSHQ 67
++++ G GVGKS L+LRF G+F S+I TI ++ + I + LQI DT G +
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
F + +LVY V+ S ++ W I+ I+ ++ +L GNK D
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRN-W--IRNIEQHASDSVNKILVGNKADMD 133
Query: 128 PEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNR 174
R V S+GQA A +G+ F ETSAKTN NV ++F + K R
Sbjct: 134 ESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180
>At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303750 from [Pisum
sativum]
Length = 202
Score = 89.8 bits (213), Expect = 1e-18
Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQI 59
PE +++++ G GVGKS L+LRF ++ +SYI TI + R V KTI LQI
Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTI-KLQI 61
Query: 60 TDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVML 119
DT G +F + H I+ Y V+ +S +K Q + EI N+ +L
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVK---QWLNEIDRYASENVNKLL 118
Query: 120 AGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVS 177
GNK D + + + VS +A A G+ F+ETSAK NV + F + K R S
Sbjct: 119 VGNKNDLTSQ-KVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMAS 175
>At4g39890.1 68417.m05651 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 214
Score = 88.6 bits (210), Expect = 3e-18
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 6/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY--RQVISSNKTICTLQITDTTGS 65
+++V G VGK+S++ RF+ F +Y PTI + + + ++T+ LQ+ DT G
Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTV-RLQLWDTAGQ 68
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F ++ I I+VY VS+RQ+ + + +G N+ ++L GNK D
Sbjct: 69 ERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQS--NVIIVLVGNKTD 126
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
E R+VS SEG+ + + +GV F+ETSAK N N+ LF+++
Sbjct: 127 -LVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKI 167
>At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1208537 from [Glycine
max]
Length = 205
Score = 88.2 bits (209), Expect = 4e-18
Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 9/162 (5%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
++ ++ G GVGKS L+L+F F+ + TI E + + NK I LQI DT G
Sbjct: 7 FKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPI-KLQIWDTAGQ 65
Query: 66 HQFPAMQRLSISKGHA-FILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKC 124
F ++ R S +G A +LVY ++ R++ L W ++E + N+ ML GNKC
Sbjct: 66 ESFRSVTR-SYYRGRAGTLLVYDITRRETFNHLAS-W--LEEARQHASENMTTMLIGNKC 121
Query: 125 DESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQE 166
D + R VS EG+ A+ G+ FME SAKT HNV + F E
Sbjct: 122 DLEDK-RTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVE 162
>At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putative
similar to GTP-binding protein(RAB1Y) GI:1370173 from
(Lotus japonicus)
Length = 212
Score = 88.2 bits (209), Expect = 4e-18
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQIT 60
PE ++V++ G GVGKSSL+L F TF + PTI ++ + ++ + L I
Sbjct: 8 PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTF-DDLSPTIGVDFKVKYLTIGEKKLKLAIW 66
Query: 61 DTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLA 120
DT G +F + I+VY V+ R + L IW ++ I ML
Sbjct: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIK-MLV 125
Query: 121 GNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
GNK D+ E R VS EG A+ +G F+E SAKT NV Q F+EL+
Sbjct: 126 GNKVDKESE-RAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELV 172
>At1g18200.1 68414.m02264 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 354
Score = 88.2 bits (209), Expect = 4e-18
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
++ V+ G VGKS+L+ RF + FR PTI + YR V +KTI QI DT G
Sbjct: 14 FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTI-KAQIWDTAGQ 72
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F A+ +L+Y ++ R + + ++ W + E++G P V+L GNK D
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRITFKNIEK-W--LSELRGFSSPETVVVLVGNKSD 129
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+ REV EG+ A++ G+ F+ETSA N NV + F ++
Sbjct: 130 LG-QSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMI 171
>At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 206
Score = 86.2 bits (204), Expect = 1e-17
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 6/179 (3%)
Query: 1 MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIE-DTYRQVISSNKTICTLQI 59
M + Y++V G GVGK+S++ F+ G F SY TI D + LQ+
Sbjct: 1 MGDLGKGYKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQL 60
Query: 60 TDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVML 119
DT G +F ++ I ++VY V+S+QS W I+E++ + ++L
Sbjct: 61 WDTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINTSK-W--IEEVRAERGSYVIIVL 117
Query: 120 AGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLN-MEKNRNVS 177
GNK D + R+VS EG+ +A+ +G FMETSAK N+ LF ++ + ++ N VS
Sbjct: 118 VGNKTDLVNK-RQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVS 175
>At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11J GI:1370160 from
[Lotus japonicus]
Length = 221
Score = 84.2 bits (199), Expect = 6e-17
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Query: 3 EQSNDY--RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQI 59
++S DY ++V+ G VGKS+L+ RF + F + TI ++ Q + N QI
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 60 TDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVML 119
DT G +F A+ +LVY +S RQ+ I + + E+ N+ +L
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHS---IGRWLNELHTHSDMNVVTIL 124
Query: 120 AGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
GNK D ++REVS +EG+A A+A G+ FMETSA + NV F+ ++
Sbjct: 125 VGNKSDLK-DLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVV 172
>At1g73640.1 68414.m08525 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 ras family Pfam profile:
PF00071 Ras family
Length = 233
Score = 84.2 bits (199), Expect = 6e-17
Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 3 EQSNDY--RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQ 58
E+ DY + V+ G VGKS+L+ RF K FR PTI E YR V +K I Q
Sbjct: 7 EEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKII-KAQ 65
Query: 59 ITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVM 118
I DT G +F A+ +L+Y ++ R + + +K W + E++ P V+
Sbjct: 66 IWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKK-W--LFELRDFANPETVVV 122
Query: 119 LAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
L GNK D + REV EG+ A++ G+ F+ETSA N NV + F
Sbjct: 123 LVGNKSDLR-QSREVEEDEGKTLAESEGLYFLETSALENVNVEEAF 167
>At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11C SP:Q40193 from
[Lotus japonicus]
Length = 217
Score = 83.8 bits (198), Expect = 8e-17
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 3 EQSNDY--RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQ 58
EQ DY ++V+ G GVGK++++ RF + F TI E R + KT+ Q
Sbjct: 6 EQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV-KAQ 64
Query: 59 ITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVM 118
I DT G ++ A+ +LVY ++ RQ+ + + + ++E++ NI +M
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDN---VLRWLRELRDHADSNIVIM 121
Query: 119 LAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+AGNK D + +R V+ +GQ A+ G+SF+ETSA NV + FQ +L
Sbjct: 122 MAGNKADLN-HLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVL 170
>At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2)
identical to Rab2-like protein (At-RAB2) GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 83.8 bits (198), Expect = 8e-17
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
++ ++ G GVGKS L+L+F F+ + TI E R + NK I LQI DT G
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPI-KLQIWDTAGQ 65
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
F ++ R +LVY ++ R++ L W +++ + N+ +ML GNKCD
Sbjct: 66 ESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-W--LEDARQHANANMTIMLIGNKCD 122
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
+ R VS EG+ A+ G+ FME SAKT NV + F
Sbjct: 123 LAHR-RAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAF 160
>At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small
GTP-binding protein, putative identical to SP|Q96283
Ras-related protein Rab11A {Arabidopsis thaliana};
identical to cDNA Rab11 protein GI:2598228
Length = 217
Score = 83.8 bits (198), Expect = 8e-17
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 3 EQSNDY--RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQ 58
+Q DY ++V+ G GVGKS+++ RF + F TI E R KTI Q
Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTI-KAQ 64
Query: 59 ITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVM 118
I DT G ++ A+ +LVY ++ RQ+ + + + ++E++ NI +M
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDN---VLRWLRELRDHADSNIVIM 121
Query: 119 LAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+AGNK D + +R V+ +GQ+ A+ G+SF+ETSA NV + FQ +L
Sbjct: 122 MAGNKSDLN-HLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTIL 170
>At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putative
similar to Rab1-like small GTP-binding protein
GI:4096662 from [Petunia x hybrida]
Length = 205
Score = 83.8 bits (198), Expect = 8e-17
Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY--RQVISSNKTICTLQITDTTGS 65
+++++ G VGKS L+LRF + +SYI TI + R + KTI LQI DT G
Sbjct: 9 FKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTI-KLQIWDTAGQ 67
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F + H I+VY + +S +K Q + EI ++ +L GNK D
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDCTEMESFNNVK---QWLSEIDRYANESVCKLLIGNKND 124
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
E + VS G+A A G+ F+ETSAK + NV Q F
Sbjct: 125 -MVESKVVSTETGRALADELGIPFLETSAKDSINVEQAF 162
>At4g35860.1 68417.m05093 Ras-related GTP-binding protein, putative
similar to Rab2-like GTP-binding protein GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 83.4 bits (197), Expect = 1e-16
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 7/161 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
++ ++ G GVGKS L+L+F F+ + TI E R V + I LQI DT G
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPI-KLQIWDTAGQ 65
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
F ++ R +LVY ++ R++ L W +++ + PN+ +ML GNKCD
Sbjct: 66 ESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-W--LEDARQHANPNMSIMLIGNKCD 122
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQE 166
+ + R VS EGQ A+ G+ F+E SA+T NV + F E
Sbjct: 123 LAHK-RAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIE 162
>At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 207
Score = 82.6 bits (195), Expect = 2e-16
Identities = 51/162 (31%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY--RQVISSNKTICTLQITDTTGS 65
Y++V G VGK+S++ RF+ F +Y TI + + + ++T+ LQ+ DT G
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV-RLQLWDTAGQ 68
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F ++ I ++VY V++R S W I+E++ ++ ++L GNK D
Sbjct: 69 ERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSK-W--IEEVRNERAGDVIIVLVGNKTD 125
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
E R+VS EG ++ + +GV F+ETSAK N+ LF+++
Sbjct: 126 -LVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKI 166
>At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11C GI:1370146 from
[Lotus japonicus]
Length = 214
Score = 82.2 bits (194), Expect = 2e-16
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
+++V+ G GVGKS+++ RF + F TI E R + KT+ QI DT G
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV-KAQIWDTAGQ 71
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
++ A+ +LVY ++ RQ+ E + + ++E++ NI +M+AGNK D
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFEN---VLRWLRELRDHADSNIVIMMAGNKSD 128
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLN 169
+ +R V+ +G++ A+ G+SF+ETSA N+ + FQ +L+
Sbjct: 129 LN-HLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILS 171
>At5g03530.1 68418.m00309 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 210
Score = 81.8 bits (193), Expect = 3e-16
Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR--QVISSNKTICTLQITDTTGS 65
+++++ G GVGKSSL++ F+ + E PTI ++ Q+ K + L I DT G
Sbjct: 14 FKILLIGDSGVGKSSLLVSFISSSV-EDLAPTIGVDFKIKQLTVGGKRL-KLTIWDTAGQ 71
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F + ILVY V+ R++ L +W E+ + ML GNK D
Sbjct: 72 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVR-MLVGNKVD 130
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
E R VS EG A A+ F+E SA+T NV Q F+EL
Sbjct: 131 RESE-RGVSREEGIALAKELNCMFLECSARTRQNVEQCFEEL 171
>At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:2723477 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00071
Ras family
Length = 205
Score = 81.0 bits (191), Expect = 5e-16
Identities = 57/162 (35%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR--QVISSNKTICTLQITDTTGS 65
+++++ G GVGKSSL+L F+ + E PTI ++ Q+ K + L I DT G
Sbjct: 14 FKILLIGDSGVGKSSLLLSFISSSV-EDLAPTIGVDFKIKQMKVRGKRL-KLTIWDTAGQ 71
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F + ILVY V+ R++ L IW E+ I ML GNK D
Sbjct: 72 EKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIK-MLVGNKVD 130
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
E R+VS EG A A+ F E SA+T NV F+EL
Sbjct: 131 RESE-RKVSREEGMALAKDLNCLFHECSARTRENVNGCFEEL 171
>At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:623586 from [Nicotiana
tabacum] ; contains an ADP-ribosylation factors family
signature for proteins involved in protein trafficking
Length = 208
Score = 81.0 bits (191), Expect = 5e-16
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY--RQVISSNKTICTLQITDTTGS 65
Y++V G VGK+S++ RF+ F +Y TI + + + ++T+ LQ+ DT G
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV-RLQLWDTAGQ 68
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F ++ I ++VY V+SRQS W I E++ ++ V+L GNK D
Sbjct: 69 ERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTK-W--IDEVRTERGSDVIVVLVGNKTD 125
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
+ R+VS E +A+A+ V F+ETSAK N+ LF+++
Sbjct: 126 LVDK-RQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKI 166
>At3g12160.1 68416.m01516 Ras-related GTP-binding family protein
similar to ras-related GTP-binding protein RGP1
SP:P25766 from [Oryza sativa];contains Pfam profile:
PF00071 Ras family
Length = 222
Score = 80.2 bits (189), Expect = 9e-16
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
++VV+ G VGK+ L+ RF + F TI E + ++ NKT+ QI DT G
Sbjct: 16 FKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTV-KAQIWDTAGQ 74
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
++ A+ +LVY ++ RQS + + W ++E++G NI +ML GNKCD
Sbjct: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAK-W--LEELRGHADKNIVIMLIGNKCD 131
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+R V + Q AQ + FMETSA NV F +L
Sbjct: 132 LG-SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTIL 173
>At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putative
similar to GTP binding protein GI:218228 from [Vicia
faba]; identical to cDNA small GTP-binding protein
(Rab11) GI:451859
Length = 216
Score = 80.2 bits (189), Expect = 9e-16
Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY-RQVISSNKTICTLQITDTTGSH 66
++VV+ G GVGKS+L+ RF K F TI + + + + + QI DT G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQE 73
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
++ A+ +LVY V+ R + E + W +KE+K PNI VML GNK D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRRATFENVDR-W--LKELKNHTDPNIVVMLVGNKSD- 129
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+ V +G++ A+ + FMETSA NV F E+L
Sbjct: 130 LRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVL 171
>At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1370146 from [Lotus
japonicus]
Length = 217
Score = 79.4 bits (187), Expect = 2e-15
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 2 PEQSNDY--RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTL 57
P++ DY +VV+ G GVGKS+L+ RF + F TI E R + +T+
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV-KA 63
Query: 58 QITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPV 117
QI DT G ++ A+ +LVY V+ + E + W +KE++ NI +
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSR-W--LKELRDHADSNIVI 120
Query: 118 MLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLN 169
ML GNK D +R V+ + Q+ A+ G+SF+ETSA NV + FQ +L+
Sbjct: 121 MLIGNKTDLK-HLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILS 171
>At3g51300.1 68416.m05615 Rac-like GTP-binding protein (ARAC11) /
Rho-like GTP-binding protein (ROP1) identical to GTP
binding protein Rop1At [Arabidopsis thaliana]
GI:2558666, rac-like GTP binding protein Arac11
[Arabidopsis thaliana] GI:3603426
Length = 197
Score = 77.8 bits (183), Expect = 5e-15
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
+ V G G VGK+ L++ + TF Y+PT+ D + + N + L + DT G +
Sbjct: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDY 67
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD--- 125
++ LS FIL +S+ S+ S E + W I E+K P +P++L G K D
Sbjct: 68 NRLRPLSYRGADVFILAFSLISKASYENVSKKW--IPELKHY-APGVPIVLVGTKLDLRD 124
Query: 126 ------ESPEIREVSASEG-QAQAQAWGVSFMETSAKTNHNVTQLFQELLNM 170
+ P ++ ++G + + Q +++E S+KT NV +F + +
Sbjct: 125 DKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRV 176
>At3g15060.1 68416.m01905 Ras-related GTP-binding family protein
similar to GTP-binding protein GI:303742 from [Pisum
sativum]; contains Pfam profile: PF00071 ras family
Length = 217
Score = 77.4 bits (182), Expect = 7e-15
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY-RQVISSNKTICTLQITDTTGSH 66
Y+VV+ G GVGKS+L+ RF + F TI + + I ++ I QI DT G
Sbjct: 14 YKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQE 73
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
++ A+ +LVY V+ + E ++ W +KE++ NI +ML GNK D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVER-W--LKELRDHTEANIVIMLVGNKAD- 129
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLN 169
+R VS + +A A+ FMETSA NV F E+L+
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLS 172
>At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) /
Rho-like GTP-binding protein (ROP6) identical to
SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
identical to cDNA Rho-like GTP binding protein (Rop6)
GI:2645642
Length = 198
Score = 77.0 bits (181), Expect = 9e-15
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY-RQVISSNKTICTLQITDTTGSHQ 67
+ V G G VGK+ L++ + TF Y+PT+ D + VI TI L + DT G
Sbjct: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTI-NLGLWDTAGQED 66
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD-- 125
+ ++ LS F+L +S+ S+ S E + W + E++ P +P++L G K D
Sbjct: 67 YNRLRPLSYRGADVFLLAFSLVSKASYENVSKKW--VPELRHY-APGVPIILVGTKLDLR 123
Query: 126 -------ESPEIREVSASEGQAQAQAWGV-SFMETSAKTNHNVTQLFQELLNM 170
E P +S ++G+ + G +++E SAKT NV +F + +
Sbjct: 124 DDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKV 176
>At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:289370 from [Brassica
napus]
Length = 219
Score = 77.0 bits (181), Expect = 9e-15
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSH 66
+++V+ G VGKS+L+ R+ + F TI ++ Q + QI DT G
Sbjct: 13 FKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQE 72
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
+F A+ ++VY +S R + E + + + E+K + ML GNKCD
Sbjct: 73 RFRAVTSAYYRGAVGALVVYDISRRSTFES---VGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
IR VS EG+A A+ G+ FMETSA + NV F+ ++
Sbjct: 130 E-SIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVI 170
>At2g17800.1 68415.m02063 Rac-like GTP-binding protein (ARAC1)
(ATGP2) identical to Rac-like GTP-binding protein
(ARAC1) SP:Q38902 from [Arabidopsis thaliana]
Length = 197
Score = 77.0 bits (181), Expect = 9e-15
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
+ V G G VGK+ L++ + TF Y+PT+ D + + N L + DT G +
Sbjct: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDY 67
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD--- 125
++ LS FIL +S+ S+ S E + W I E+K P +P++L G K D
Sbjct: 68 NRLRPLSYRGADVFILAFSLISKASYENVSKKW--IPELKHY-APGVPIVLVGTKLDLRD 124
Query: 126 ------ESPEIREVSASEGQAQAQAWGV-SFMETSAKTNHNVTQLFQELLNM 170
+ P ++ ++G+ + G +++E S+KT NV +F + +
Sbjct: 125 DKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRV 176
>At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)
identical to Ras-related protein ARA-2 SP:P28185 from
[Arabidopsis thaliana]
Length = 216
Score = 76.6 bits (180), Expect = 1e-14
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSH 66
+++V+ G GVGKS+L+ RF K F TI + + + QI DT G
Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQE 73
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
++ A+ +L+Y V+ + E W ++E++G PNI VML GNKCD
Sbjct: 74 RYRAITSAYYRGAVGALLIYDVTRHATFENAAR-W--LRELRGHTDPNIVVMLIGNKCD- 129
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+ V E +A A+ + FMETSA NV F E+L
Sbjct: 130 LRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVL 171
>At5g45970.1 68418.m05652 Rac-like GTP-binding protein (ARAC2)
identical to RAC-like GTP binding protein ARAC2
SP:Q38903
Length = 201
Score = 76.2 bits (179), Expect = 2e-14
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
+ V G G VGK+ +++ + TF Y+PT+ D + + + + L + DT G +
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDY 67
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD--- 125
++ LS F+L +S+ S+ S E + W + E+K P IP++L G K D
Sbjct: 68 NRLRPLSYRGADVFLLAFSLISKASYENIHKKW--LPELKHY-APGIPIVLVGTKLDLRD 124
Query: 126 ------ESPEIREVSASEGQAQAQAWG-VSFMETSAKTNHNVTQLFQELLNM 170
+ P ++ ++G+ + G V ++E S+KT NV +F + +
Sbjct: 125 DKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRV 176
>At3g07410.1 68416.m00883 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 217
Score = 76.2 bits (179), Expect = 2e-14
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSH 66
+++V+ G VGKS+L+ RF + F + TI ++ Q++ QI DT G
Sbjct: 13 FKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQE 72
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
+F A+ ++VY ++ + E +K W ++E+ + ML GNKCD
Sbjct: 73 RFRAVTSAYYRGAFGALIVYDITRGDTFESVKR-W--LQELNTHCDTAVAQMLVGNKCDL 129
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVS 177
+IR VS EG+A A+ G+ FMETSA NV + F E++ E NVS
Sbjct: 130 E-DIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAF-EIVIREIFNNVS 178
>At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from (Pisum
sativum)
Length = 218
Score = 76.2 bits (179), Expect = 2e-14
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY-RQVISSNKTICTLQITDTTGSH 66
++VV+ G GVGKS+L+ RF + F TI + + I + I QI DT G
Sbjct: 14 FKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQE 73
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
++ A+ +LVY V+ + E ++ W +KE++ NI +ML GNK D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVER-W--LKELRDHTDANIVIMLVGNKAD- 129
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+R +S E +A A+ FMETSA NV F E+L
Sbjct: 130 LRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVL 171
>At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putative
similar to Ras-related protein RAB7 GI:1370186 from
[Pisum sativum], Plant Mol. Biol. 21 (6), 1195-1199
(1993); contains Pfam profile: PF00071 Ras family
Length = 206
Score = 75.8 bits (178), Expect = 2e-14
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSHQ 67
+V++ G GVGK+SL+ ++V F Y TI D + + + TLQI DT G +
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIW--QTIKEIKGVELPNIPVMLAGNKCD 125
F ++ +LVY V+S +S E L W + + + + N P +L GNK D
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFENLNN-WREEFLIQASPSDPENFPFVLIGNKVD 128
Query: 126 -ESPEIREVSASEGQAQAQAWG-VSFMETSAKTNHNVTQLFQ 165
+ R VS + +A + G + + ETSAK NV + FQ
Sbjct: 129 VDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQ 170
>At4g18800.1 68417.m02776 Ras-related GTP-binding family protein
similar to ras-related GTP binding protein RIC2
SP:P40393 from [Oryza sativa]; contains Pfam profile:
PF00071 Ras family
Length = 214
Score = 75.4 bits (177), Expect = 3e-14
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY-RQVISSNKTICTLQITDTTGSH 66
++VV+ G GVGKS+L+ RF + F TI + + ++ N+ + QI DT G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQE 73
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
++ A+ +LVY V+ + E ++ W ++E++ PNI VML GNK D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHSTFENVER-W--LRELRDHTDPNIVVMLVGNKSD- 129
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+ V + ++ A+ + FMETSA + NV F E+L
Sbjct: 130 LRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVL 171
>At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / small
GTP-binding protein, putative nearly identical to
SP:P19892 Ras-related protein ARA-1 [Arabidopsis
thaliana] (Gene 76:313-319(1989))
Length = 261
Score = 75.4 bits (177), Expect = 3e-14
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSH 66
+++VV G VGKS+L+ R+ + F + TI ++ Q + QI DT G
Sbjct: 56 FKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQE 115
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
+F A+ ++VY ++ R + E + + + E+K + ML GNKCD
Sbjct: 116 RFRAVTSAYYRGAVGALVVYDITRRTTFES---VGRWLDELKIHSDTTVARMLVGNKCDL 172
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVS 177
IR VS EG+A A+ G+ F+ETSA + NV F E++ ++ NVS
Sbjct: 173 E-NIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAF-EMVILDIYNNVS 221
>At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 74.9 bits (176), Expect = 4e-14
Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
++VV+ G GVGKS+L+ RF + F TI E R + +K I QI DT G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK-IVKAQIWDTAGQ 72
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
++ A+ +LVY V+ + E ++ W +KE++ NI +M GNK D
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVER-W--LKELRDHTDANIVIMFVGNKAD 129
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLN 169
+R VS + +A A+ FMETSA + NV F E+L+
Sbjct: 130 LR-HLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLS 172
>At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303744 from [Pisum
sativum]
Length = 216
Score = 74.9 bits (176), Expect = 4e-14
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
++VV+ G GVGKS+L+ RF K F TI E R + +K I QI DT G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVI-KAQIWDTAGQ 72
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
++ A+ +LVY V+ + E ++ W +KE++ PNI VML GNK D
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVE-TW--LKELRNHTDPNIVVMLVGNKSD 129
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+ V + ++ A+ + FMETSA NV F E+L
Sbjct: 130 -LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVL 171
>At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9)
identical to rac-like protein ARAC9 GI:5381419 from
[Arabidopsis thaliana]
Length = 209
Score = 74.5 bits (175), Expect = 5e-14
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSHQ 67
+ V G G VGK+ L++ + TF Y+PT+ D + V+ KT+ L + DT G
Sbjct: 20 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTV-NLGLWDTAGQED 78
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD-- 125
+ ++ LS FIL +S+ SR S E + W + E++ P +P++L G K D
Sbjct: 79 YNRVRPLSYRGADVFILAFSLISRPSFENIAKKW--VPELRHY-APTVPIVLVGTKSDLR 135
Query: 126 -------ESPEIREVSASEGQAQAQAWG-VSFMETSAKTNHNVTQLFQELLNM 170
P + +GQ + G ++++E S+K NV +F E + +
Sbjct: 136 DNMQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKV 188
>At4g35950.1 68417.m05115 Rac-like GTP-binding protein (ARAC6)
identical to rac-like GTP binding protein Arac6
GI:3406757 from [Arabidopsis thaliana]
Length = 197
Score = 74.1 bits (174), Expect = 6e-14
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
+ V G G VGK+ L++ + TF Y+PT+ D + + N L + DT G +
Sbjct: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDY 67
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD--- 125
++ LS FIL +S+ S+ S E + W I E+K P +P++L G K D
Sbjct: 68 NRLRPLSYRGADVFILAFSLISKASYENVSKKW--IPELKHY-APGVPIVLVGTKLDLRD 124
Query: 126 ------ESPEIREVSASEGQAQAQAWGV-SFMETSAKTNHNVTQLFQELLNM 170
+ P ++ +G+ + G +++E S+K+ NV +F + +
Sbjct: 125 DKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRV 176
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 73.7 bits (173), Expect = 8e-14
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
+++V+ G VGKS+L+ R+ + F + TI E + ++ K + QI DT G
Sbjct: 13 FKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV-KAQIWDTAGQ 71
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
+F A+ ++VY ++ + E + + + E+ + ML GNKCD
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDITRSSTFEN---VGRWLDELNTHSDTTVAKMLIGNKCD 128
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVS 177
IR VS EG++ A++ G+ FMETSA + NV F E++ E N+S
Sbjct: 129 LE-SIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAF-EMVIREIYSNIS 178
>At4g28950.1 68417.m04136 Rac-like GTP-binding protein (ARAC7)
identical to rac GTP binding protein Arac7 GI:3702962
from [Arabidopsis thaliana]
Length = 209
Score = 73.3 bits (172), Expect = 1e-13
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 11/170 (6%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
+ V G G VGK+ +++ + F YIPT+ D + ++ + I L + DT G +
Sbjct: 8 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQEDY 67
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD--- 125
++ LS F+L +S+ S+ S E + W + E++ PN+P++L G K D
Sbjct: 68 SRLRPLSYRGADIFVLAFSLISKASYENVLKKW--MPELRRF-APNVPIVLVGTKLDLRD 124
Query: 126 ----ESPEIREVSASEG-QAQAQAWGVSFMETSAKTNHNVTQLFQELLNM 170
+ +++++G + + Q +++E S+KT NV +F + +
Sbjct: 125 DKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKV 174
>At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 219
Score = 73.3 bits (172), Expect = 1e-13
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
++VV+ G GVGKS+L+ RF + F TI E R+ I + I QI DT G
Sbjct: 14 FKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDDKIVKAQIWDTAGQ 73
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
++ A+ +LVY V+ + E ++ W +KE++ N +ML GNK D
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVER-W--LKELRDHTDANTVIMLVGNKAD 130
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+ +R +S E + A+ FMETSA NV F E+L
Sbjct: 131 LN-HLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVL 172
>At5g47960.1 68418.m05925 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 223
Score = 72.5 bits (170), Expect = 2e-13
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTLQITDTTGS 65
++VV+ G VGKS L+ RF + F TI E R + KTI QI DT G
Sbjct: 16 FKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTI-KAQIWDTAGQ 74
Query: 66 HQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
++ A+ +LVY ++ RQS + + W ++E++G NI +ML GNK D
Sbjct: 75 ERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAR-W--LEELRGHADKNIVIMLIGNKTD 131
Query: 126 ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+R V + + AQ + FMETSA ++NV F +L
Sbjct: 132 LG-TLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVL 173
>At1g20090.1 68414.m02514 Rac-like GTP-binding protein (ARAC4) /
Rho-like GTP-binding protein (ROP2) identical to
SP:Q38919 RAC-like GTP binding protein ARAC4 (GTP
binding protein ROP2) [Arabidopsis thaliana], Rho-like
GTP binding protein [Arabidopsis thaliana] GI:2654009
Length = 195
Score = 72.5 bits (170), Expect = 2e-13
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
+ V G G VGK+ +++ + TF Y+PT+ D + + + L + DT G +
Sbjct: 7 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDY 66
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD--- 125
++ LS FIL +S+ S+ S E + W I E++ P +P++L G K D
Sbjct: 67 NRLRPLSYRGADVFILAFSLISKASYENIAKKW--IPELRHY-APGVPIILVGTKLDLRD 123
Query: 126 ------ESPEIREVSASEGQAQAQAWGVS-FMETSAKTNHNVTQLFQELLNM 170
+ P ++ ++G+ + G + ++E S+KT NV +F + +
Sbjct: 124 DKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKV 175
>At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10)
identical to rac GTP binding protein Arac10 [Arabidopsis
thaliana] GI:3702964, rac-like GTP binding protein
Arac10 [Arabidopsis thaliana] GI:7211193; contains Pfam
profile: PF00071 Ras family
Length = 215
Score = 72.1 bits (169), Expect = 2e-13
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
+ V G G VGK+ +++ + F YIPT+ D + + T L + DT G +
Sbjct: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDY 69
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD--- 125
++ LS F+L +S+ SR S E + W I E++ P +P++L G K D
Sbjct: 70 NRLRPLSYRGADVFVLSFSLVSRASYENVFKKW--IPELQHF-APGVPLVLVGTKLDLRE 126
Query: 126 ------ESPEIREVSASEGQAQAQAWGVS-FMETSAKTNHNVTQLFQELL 168
+ P + V+ ++G+ + G + ++E S+KT NV +F +
Sbjct: 127 DKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAI 176
>At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putative
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 72.1 bits (169), Expect = 2e-13
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSHQ 67
+V++ G GVGK+SL+ ++V F Y TI D + + + TLQI DT G +
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIW--QTIKEIKGVELPNIPVMLAGNKCD 125
F ++ +LVY V+S +S E+L W + + + + N P ++ GNK D
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNSAKSFEDLNN-WREEFLIQASPSDPENFPFVVIGNKID 128
Query: 126 -ESPEIREVSASEGQAQAQAWG-VSFMETSAKTNHNVTQLF 164
+ R VS + +A + G + + ETSAK NV F
Sbjct: 129 VDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAF 169
>At3g48040.1 68416.m05237 Rac-like GTP-binding protein (ARAC8)
identical to rac GTP binding protein Arac8 GI:3702966
from [Arabidopsis thaliana]
Length = 208
Score = 71.7 bits (168), Expect = 3e-13
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
+ V G G VGK+ +++ + F YIPT+ D + + L + DT G +
Sbjct: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDTAGQEDY 69
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD--- 125
++ LS F+L +S+ SR S E + W I E++ P +P++L G K D
Sbjct: 70 NRLRPLSYRGADVFVLAFSLISRASYENVFKKW--IPELQHF-APGVPIVLVGTKMDLRE 126
Query: 126 ------ESPEIREVSASEGQAQAQAWGVS-FMETSAKTNHNVTQLFQELLNM 170
+ P + V+ S+G+ + G + ++E S+KT NV +F + +
Sbjct: 127 DRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKV 178
>At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putative
similar to Ras family GTP-binding protein SP:Q43463 from
[Glycine max]
Length = 212
Score = 71.3 bits (167), Expect = 4e-13
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSHQ 67
+V+V G GVGK+SL+ ++V F + Y TI D + + ++ TLQI DT G +
Sbjct: 11 KVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQER 70
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQT--IKEIKGVELPNIPVMLAGNKCD 125
F ++ +LVY V++ +S E L W T +K+ +E P +L GNK D
Sbjct: 71 FQSLGAAFYRGADCCVLVYDVNNLKSFETLNN-WHTEFLKQANPMEPETFPFVLIGNKTD 129
Query: 126 -ESPEIREVSASEGQAQAQAWG-VSFMETSAKTNHNVTQLF 164
+ R VS + G + + ETSAK + N+ + F
Sbjct: 130 VDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAF 170
>At1g75840.1 68414.m08809 Rac-like GTP-binding protein (ARAC5) /
Rho-like GTP-binding protein (ROP4) identical to
RAC-like GTP-binding protein (ARAC5) SP:Q38937
[Arabidopsis thaliana], Rho-like GTP binding protein
[Arabidopsis thaliana] GI:2654009; identical to cDNA
Rho-like GTP binding protein (Rop4) GI:2654008
Length = 196
Score = 71.3 bits (167), Expect = 4e-13
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
+ V G G VGK+ +++ + TF Y+PT+ D + + + L + DT G +
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDY 67
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD--- 125
++ LS FIL +S+ S+ S E + W I E++ P +P++L G K D
Sbjct: 68 NRLRPLSYRGADVFILAFSLISKASYENVAKKW--IPELRHY-APGVPIILVGTKLDLRD 124
Query: 126 ------ESPEIREVSASEGQAQAQAWGVS-FMETSAKTNHNVTQLFQELLNM 170
+ P ++ ++G+ + G ++E S+KT NV +F + +
Sbjct: 125 DKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKV 176
>At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putative
similar to RAB7D GI:1370187 from [Lotus japonicus]
(Plant J. 11 (2), 237-250 (1997)); contains Pfam
PF00071: Ras family
Length = 206
Score = 71.3 bits (167), Expect = 4e-13
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSHQ 67
+V++ G GVGK+SL+ +FV F Y TI D + + + I TLQI DT G +
Sbjct: 10 KVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQER 69
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIW--QTIKEIKGVELPNIPVMLAGNKCD 125
F ++ +LVY V+ +S + L W + + + + N P ++ GNK D
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNN-WREEFLIQASPSDPENFPFVVLGNKTD 128
Query: 126 -ESPEIREVSASEGQAQAQAWG-VSFMETSAKTNHNVTQLFQ 165
+ + R VS + +A + G + + ETSAK NV F+
Sbjct: 129 VDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFE 170
>At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303738 from [Pisum
sativum]
Length = 224
Score = 70.5 bits (165), Expect = 8e-13
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQITDTTGSH 66
++VV+ G VGKS L+ RF + F TI ++ + +S + QI DT G
Sbjct: 18 FKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQE 77
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
++ A+ +LVY ++ R++ E + P W ++E++ NI ++L GNK D
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDMTKRETFEHI-PRW--LEELRAHADKNIVIILIGNKSDL 134
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKN 173
+ R V + + A+ G+ F+ETSA NV F L+ N
Sbjct: 135 EDQ-RAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYN 180
>At5g65270.1 68418.m08210 Ras-related GTP-binding family protein
similar to GTP-binding protein RAB11A GI:1370142 from
[Lotus japonicus]; contains Pfam profile: PF00071 Ras
family
Length = 226
Score = 69.7 bits (163), Expect = 1e-12
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 2 PEQSNDY--RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI--EDTYRQVISSNKTICTL 57
P Q DY +VV+ G VGKS ++ R+ + F TI E R ++ +K++
Sbjct: 10 PSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV-KA 68
Query: 58 QITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPV 117
QI DT G ++ A+ +LVY ++ RQ+ + + P W ++E++ NI +
Sbjct: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHI-PRW--LEELRAHADKNIVI 125
Query: 118 MLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+L GNK D + R + + + A+ G+ F+ETSA NV F +L
Sbjct: 126 ILIGNKSDLVDQ-RAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVL 175
>At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 68.9 bits (161), Expect = 2e-12
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTY-RQVISSNKTICTLQITDTTGSH 66
+++V+ G GVGKS+L+ RF + F TI + + + ++ I Q+ DT G
Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQE 73
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
++ A+ +LVY ++ + E ++ W +KE++ N+ +ML GNK D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDITRHITFENVER-W--LKELRDHTDANVVIMLVGNKAD- 129
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+R V E ++ ++ + FMETSA NV Q F +L
Sbjct: 130 LRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVL 171
>At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 /
small GTP-binding protein, putative identical to
SP:O04157 Ras-related protein Rab7 (AtRab75)
[Arabidopsis thaliana]
Length = 203
Score = 66.9 bits (156), Expect = 9e-12
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSHQ 67
+V++ G GVGK+SL+ ++V F + Y TI D + + + + TLQI DT G +
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQER 69
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIW--QTIKEIKGVELPNIPVMLAGNKCD 125
F ++ +LVY V+ +S E L W + + + P +L GNK D
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNHLKSFESLDN-WHNEFLTRASPRDPMAFPFILLGNKVD 128
Query: 126 -ESPEIREVSASEGQAQ-AQAWGVSFMETSAKTNHNVTQLF 164
+ R VS + + A+ + + ETSAK ++NV F
Sbjct: 129 IDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSF 169
>At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A from [Lotus
japonicus]
Length = 206
Score = 65.7 bits (153), Expect = 2e-11
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSHQ 67
+V+V G GVGK+SL+ ++V F Y TI D + + + + TLQI DT G +
Sbjct: 10 KVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQER 69
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIW--QTIKEIKGVELPNIPVMLAGNKCD 125
F ++ LVY V+ +S + L+ W + +K+ + P ++ GNK D
Sbjct: 70 FQSLGAAFYRGADCCALVYDVNVLRSFDNLE-TWHEEFLKQASPSDPKTFPFIVLGNKID 128
Query: 126 ESPEIREVSASEGQAQ--AQAWGVSFMETSAKTNHNVTQLF 164
V + + A A + + ETSAK + NV + F
Sbjct: 129 VDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAF 169
>At3g16100.1 68416.m02034 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 65.7 bits (153), Expect = 2e-11
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSHQ 67
+V++ G GVGK+SL+ +FV F Y TI D + + + I TLQI DT G +
Sbjct: 10 KVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQER 69
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIW--QTIKEIKGVELPNIPVMLAGNKCD 125
F ++ +LV V+ +S E L W + + + + N P ++ GNK D
Sbjct: 70 FQSLGVAFYRGADCCVLVNDVNVMKSFENLNN-WREEFLIQASPSDPENFPFVVLGNKTD 128
Query: 126 -ESPEIREVSASEGQAQAQAWG-VSFMETSAKTNHNVTQLFQ 165
+ + R V+ + ++ + G + + ETSAK NV F+
Sbjct: 129 VDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFE 170
>At5g10260.1 68418.m01191 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab-6A SP:P20340 from
[Homo sapiens]
Length = 178
Score = 63.3 bits (147), Expect = 1e-10
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 57 LQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIP 116
LQ+ DT G +F ++ I ++VY V++RQS W I++++ ++
Sbjct: 31 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSK-W--IEDVRTERGSDVI 87
Query: 117 VMLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
++L GNK D + R+VS EG +A+ +GV F+ETSAK N+ LF+++
Sbjct: 88 IVLVGNKTDLVDK-RQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKI 137
>At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3)
identical to atran3 [Arabidopsis thaliana] GI:2058280
Length = 221
Score = 61.7 bits (143), Expect = 4e-10
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSH 66
+++V+ G GG GK++ V R + G F + Y PTI + + +N DT G
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
+F ++ G I+++ V++R + + + P W +++ V NIP++L GNK D
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWH--RDLCRV-CENIPIVLCGNKVD- 128
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
+ R+V A + + + + E SAK+N+N + F
Sbjct: 129 -VKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPF 164
>At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein
(RAN-2) identical to GTP-binding nuclear protein RAN-2
SP:P41917 from [Arabidopsis thaliana]
Length = 221
Score = 61.7 bits (143), Expect = 4e-10
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSH 66
+++V+ G GG GK++ V R + G F + Y PTI + + +N DT G
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
+F ++ G I+++ V++R + + + P W +++ V NIP++L GNK D
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWH--RDLCRV-CENIPIVLCGNKVD- 128
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
+ R+V A + + + + E SAK+N+N + F
Sbjct: 129 -VKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPF 164
>At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein
(RAN-1) identical to GTP-binding nuclear protein RAN-1
SP:P41916 from [Arabidopsis thaliana]
Length = 221
Score = 61.7 bits (143), Expect = 4e-10
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTICTLQITDTTGSH 66
+++V+ G GG GK++ V R + G F + Y PTI + + +N DT G
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 67 QFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
+F ++ G I+++ V++R + + + P W +++ V NIP++L GNK D
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWH--RDLCRV-CENIPIVLCGNKVD- 128
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
+ R+V A + + + + E SAK+N+N + F
Sbjct: 129 -VKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPF 164
>At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GB:D12541 GI:303736 from
[Pisum sativum]
Length = 237
Score = 61.3 bits (142), Expect = 5e-10
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 1 MPEQSND-YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-QVISSNKTICTLQ 58
MPE+ + ++VVV G VGK+ L+ RF F TI ++ + I+ + Q
Sbjct: 21 MPEKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQ 80
Query: 59 ITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVM 118
I DT G ++ A+ ++VY ++ R S + + W ++E++ + +M
Sbjct: 81 IWDTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVAR-W--VEELRAHADDSAVIM 137
Query: 119 LAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
L GNK D S R V + A+ + F E SA + NV + F LL
Sbjct: 138 LVGNKADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLL 187
>At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A GI:1370182 from
[Lotus japonicus]
Length = 204
Score = 60.5 bits (140), Expect = 8e-10
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIE-DTYRQVISSNKTICTLQITDTTGSHQ 67
++++ G GVGK+SL+ R+ F++ + TI D + I + LQI DT G +
Sbjct: 7 KIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQER 66
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIW--QTIKEIKGVELPNIPVMLAGNKCD 125
F ++ +LVY V++ ++ E + W + IK+ P +L GNK D
Sbjct: 67 FKSLPSRFYRDTDCCVLVYDVNTLKTFESIDN-WHDEFIKQANPETPTKFPFVLMGNKTD 125
Query: 126 ESPEIREVSASE--GQAQAQAWGVSFMETSAKTNHNVTQLFQEL 167
+ V A E Q + + ETSAK NV + F E+
Sbjct: 126 VNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEI 169
>At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putative
similar to GTP-binding protein atran3 GI:2058280 from
[Arabidopsis thaliana]
Length = 222
Score = 58.0 bits (134), Expect = 4e-09
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 1 MPEQSN----DYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTI-EDTYRQVISSNKTIC 55
+P Q N +++++ G GG GK++ + R + G F + PT+ D Y +N+
Sbjct: 3 LPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKI 62
Query: 56 TLQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNI 115
+ DT G ++ ++ G I+++ V++R + + ++ ++ + NI
Sbjct: 63 RFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRV----CKNI 118
Query: 116 PVMLAGNKCD-ESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
P++L GNK D S +I+ S + + + + E SAK N N + F
Sbjct: 119 PIVLCGNKVDVPSRQIKPKHVSYHRKKC----LQYYEMSAKNNCNFEKPF 164
>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
to Mig-2-like GTPase Mtl [Drosophila melanogaster]
GI:7271872; contains Pfam profile PF00036: EF hand
Length = 648
Score = 53.2 bits (122), Expect = 1e-07
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITD 61
P R+VV G G GKSSL++ +F + P + D Y+ I + I D
Sbjct: 12 PGSPKSVRIVVVGDKGTGKSSLIVAAATDSFPPNVPPVLPD-YKLPIEFFPDGIPVTIVD 70
Query: 62 TTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAG 121
T+ + + + + A +L Y+ ++LE L W + E++ +E+ IP+++AG
Sbjct: 71 TSSRPEDRDIVAEELKRADAVVLTYACDRPETLERLSEYW--LPELRRLEV-KIPIIVAG 127
Query: 122 NKCDESPEIREVSASE 137
K D + +VS +
Sbjct: 128 CKLDFRDDNNQVSLEQ 143
Score = 31.5 bits (68), Expect = 0.43
Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 14/178 (7%)
Query: 8 YRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR----QVISSNKTICTLQITDTT 63
++ VFG GKS+L+ F+ ++ ++ T ++ Y + KT+ +I +
Sbjct: 430 FQCFVFGPNNAGKSALLNCFLGRSYTDNQESTTDERYAVNMVDESGAKKTLIMREIPEDG 489
Query: 64 GSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIK---EIKGVELPNIPVMLA 120
F + + S++ + VY S S + + + E G E+P + V A
Sbjct: 490 VQGLFSSKE--SLAACDIAVFVYDSSDESSWKRATQLLVEVANYGEATGYEVPCLMVS-A 546
Query: 121 GNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVSL 178
+ D SP +S E Q G+ + + + LF+++L ++ ++S+
Sbjct: 547 KDDLDSSP----ISIQESTRMTQDMGIEPPVSISSKLGDFNNLFRKILTAAQHPHLSI 600
>At1g02440.1 68414.m00192 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:AAA32729 GI:166586 from
(Arabidopsis thaliana)
Length = 190
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
R+V+FG GG GKSS++ +F G + +PT+ V + +C ++ F
Sbjct: 19 RIVLFGLGGTGKSSIMHKFKTGETLTTTMPTVGLNVESVKYKDSNLCFWEMGGQQCYMWF 78
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQ-TIKEIKGVELPNIPVMLAGNK 123
P + + +LV + R +EE K I EI+G N PV++ GNK
Sbjct: 79 PLWKHW-FQEIAGLVLVVDSTGRDQIEETKDFLNVVIDEIQGSVPDNAPVLVYGNK 133
>At3g49870.1 68416.m05452 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor-like protein 1 (SP:P40616)
[Homo sapiens]; ARF3 ADP-RIBOSYLATION FACTOR,GP:453191
Arabidopsis thaliana; contains domain PF00025:
ADP-ribosylation factor family
Length = 184
Score = 46.8 bits (106), Expect = 1e-05
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 VFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQFPAM 71
+ G GK+SLV G + E IPT+ R+V N TI ++ D G +F +M
Sbjct: 24 LIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTI---KLWDLGGQPRFRSM 80
Query: 72 QRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIR 131
A + V + +L K + + L IP+++ GNK D+ +
Sbjct: 81 WERYCRAVSAIVYVVDAADPDNLSVSKSELHDL--LSKTSLNGIPLLVLGNKIDKPGALS 138
Query: 132 EVSASE--GQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRN 175
+ + ++ G V S K + N+ Q+ L+ K++N
Sbjct: 139 KEALTDEMGLTSLTDREVCCFMISCKNSTNIDQVIDWLVKHSKSKN 184
>At5g46025.1 68418.m05660 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 113
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 65 SHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGV-ELPNIPVMLAGNK 123
S+ + ++ + ++VY ++S + + ++ Q +KE++G + + +ML GNK
Sbjct: 3 SYSYRHVRHARYHRAMGALIVYDITSHTTFKNVE---QWLKELRGFFDTDKLMIMLVGNK 59
Query: 124 CDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKN 173
D REVS E ++ A+ + F+ETSA NV + F +L N
Sbjct: 60 SDLDHR-REVSMEEAKSFAEKEKLLFIETSALDATNVEECFTNVLTQIYN 108
>At4g09720.2 68417.m01597 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A from [Lotus
japonicus]
Length = 172
Score = 44.8 bits (101), Expect = 4e-05
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 42 DTYRQVISSNKTICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIW 101
D + + + + TLQI DT G +F ++ LVY V+ +S + L+ W
Sbjct: 10 DFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLE-TW 68
Query: 102 --QTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQ--AQAWGVSFMETSAKTN 157
+ +K+ + P ++ GNK D V + + A A + + ETSAK +
Sbjct: 69 HEEFLKQASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDD 128
Query: 158 HNVTQLF 164
NV + F
Sbjct: 129 FNVDEAF 135
>At5g37680.1 68418.m04538 ADP-ribosylation factor, putative
ADP-ribosylation factor, Leishmania major, EMBL:LMFP1421
and ADP-ribosylation factor-like protein 1 (ARL1)
(SP:P40616) Homo sapiens; contains PF00025:
ADP-ribosylation factor family
Length = 184
Score = 44.0 bits (99), Expect = 8e-05
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 14 GAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQFPAMQR 73
G GK+SLV G + E IPT+ R+V N TI +I D G +F M
Sbjct: 26 GLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVTKGNVTI---KIWDLGGQRRFRTMWE 82
Query: 74 LSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDES 127
A + V + R S+ + + + L IP+++ GNK D+S
Sbjct: 83 RYCRGVSAIVYVIDAADRDSVPISRSELNDL--LTKPSLNGIPLLILGNKIDKS 134
>At5g67560.1 68418.m08519 ADP-ribosylation factor, putative
identical to GP:15450888 ADP-ribosylation factor-like
protein {Arabidopsis thaliana]
Length = 184
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 7/166 (4%)
Query: 12 VFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQFPAM 71
+ G GK+SLV G + E IPT+ R+V K T+++ D G +F +M
Sbjct: 24 LIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKV---TKGSVTIKLWDLGGQPRFRSM 80
Query: 72 QRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIR 131
A + V + +L K + + L IP+++ GNK D+ +
Sbjct: 81 WERYCRSVSAIVYVVDAADPDNLSVSKSELHDL--LSKTSLNGIPLLVLGNKIDKPGALS 138
Query: 132 EVSASE--GQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRN 175
+ + ++ G V S K + N+ Q+ L+ K+ N
Sbjct: 139 KEALTDEMGLKSLTDREVCCFMISCKNSTNIDQVIDWLVKHSKSSN 184
>At3g49860.1 68416.m05451 ADP-ribosylation factor, putative similar
to GTP-binding ADP-ribosylation factor homolog 1 protein
(SP:P25160) [Drosophila melanogaster] and various
ADP-RIBOSYLATION FACTOR (ARF) - like proteins; contains
PF00025: ADP-ribosylation factor family domain
Length = 165
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 7/164 (4%)
Query: 14 GAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQFPAMQR 73
G GK+SLV G + E IPT+ R+V N I ++ D G +F M
Sbjct: 7 GLQNSGKTSLVNVVATGEYSEDMIPTVGFNMRKVTKENVAI---RLWDLGGQPRFRCMWE 63
Query: 74 LSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREV 133
+ V + ++L + + + L IP+++ GNK D + +
Sbjct: 64 RYCRAVSMIVYVVDAADTENLSVSRSELHDL--LSNASLIGIPLLVLGNKIDIHGALSKE 121
Query: 134 SASE--GQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRN 175
+ +E G + + V + S K + QL L+N K++N
Sbjct: 122 ALTEEMGLSSVTSREVCCLMISCKNPTTIDQLTDWLVNHSKSKN 165
>At3g63150.1 68416.m07092 GTP-binding protein-related low similarity
to SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
contains Pfam profile PF00036: EF hand (domain)
Length = 643
Score = 37.9 bits (84), Expect = 0.005
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
RV V G G GKSSL+ TF ++ +P + + + I DT S
Sbjct: 16 RVAVAGDKGTGKSSLISAVASETFPDN-VPRVLPPITLPADAFPDYIPITIVDTPSSIDN 74
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCD 125
K +L Y+ +L+ L W + E++ +E+ PV++ G K D
Sbjct: 75 RIKLIEEFRKADVVLLTYACDQPSTLDRLSSYW--LPELRRLEI-KAPVIVVGCKLD 128
Score = 30.7 bits (66), Expect = 0.75
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 11/181 (6%)
Query: 4 QSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYR-----QVISSNKTICTLQ 58
+ N ++ VFG GKS+L+ F+ F SY T+ + Y Q S KT+ +
Sbjct: 422 ERNVFQCFVFGPKKSGKSALLDSFLGRKFSNSYKATMGERYAANVIDQPGGSKKTLILRE 481
Query: 59 ITDTTGSHQFPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELP-NIPV 117
I + +F + S++ ++VY S S + + I + +G E P
Sbjct: 482 IPEDR-VKKF-LTNKESLAACDVAVVVYDSSDVYSWRKAREILMEVAR-RGEERGYGTPC 538
Query: 118 MLAGNKCDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRNVS 177
+L K D P +S E G+ + + LF +++ +N ++S
Sbjct: 539 LLVAAKDDLDP--YPMSVQESDRVCMELGIDIPVSLSMKLGEPNSLFSRIVSTAENPHMS 596
Query: 178 L 178
+
Sbjct: 597 I 597
>At3g05310.1 68416.m00579 GTP-binding protein-related low similarity
to rac 1 protein [Physcomitrella patens] GI:7243743;
contains Pfam profile PF00036: EF hand (domain)
Length = 648
Score = 37.5 bits (83), Expect = 0.007
Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Query: 9 RVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQF 68
R+VV G G GKSSL++ + TF + IP++ + DT+ +
Sbjct: 16 RIVVVGEKGSGKSSLIMAAARNTFHPN-IPSLLPYTNLPSEFFPDRIPATVIDTSSRPED 74
Query: 69 PAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESP 128
+ + A +L ++ ++L+ L W + + +E+ +P+++AG + D
Sbjct: 75 KGKVVKEVRQADAIVLTFAFDRPETLDRLSKYWLPL--FRQLEV-RVPIIVAGYEVDNKE 131
Query: 129 EIREVSASE 137
S +
Sbjct: 132 AYNHFSIEQ 140
>At4g08190.1 68417.m01354 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11A
(Swiss-Prot:Q96283) [Arabidopsis thaliana]
Length = 127
Score = 35.1 bits (77), Expect = 0.035
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 91 RQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQAQAQAWGVSFM 150
R ++E W ++E++ NI +M+AGNK D + +R V+ +G + +SF+
Sbjct: 60 RSLMKERLQRW--LRELRDHADSNIVIMMAGNKADLN-HLRSVAEEDGH---KTESLSFL 113
Query: 151 ETSAKTNHNVTQLF 164
ETSA NV + F
Sbjct: 114 ETSALEATNVEKAF 127
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.3 bits (70), Expect = 0.25
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 15/166 (9%)
Query: 10 VVVFGAGGVGKSSLV--LRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDTTGSHQ 67
V V G GK+SL+ LR RE+ T + V+ + ++ DT G
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTSVAAREAGGIT-QHVGAFVVGMPDSGTSITFLDTPGHAA 280
Query: 68 FPAMQRLSISKGHAFILVYSVSSRQSLEELKPIWQTIKEIKGVELPNIPVMLAGNKCDE- 126
F M+ + +LV + + + P QT++ I N+PV++A NKCD+
Sbjct: 281 FSEMRARGAAVTDIVVLVVAAD-----DGVMP--QTLEAIAHARSANVPVVVAINKCDKP 333
Query: 127 --SPE-IREVSASEG-QAQAQAWGVSFMETSAKTNHNVTQLFQELL 168
+PE ++ SEG + + V +E SA + + +L + LL
Sbjct: 334 GANPEKVKYQLTSEGIELEDIGGNVQAVEVSAAKSTGLDKLEEALL 379
>At5g45160.1 68418.m05544 root hair defective 3 GTP-binding (RHD3)
family protein contains Pfam profile: PF05879 root hair
defective 3 GTP-binding protein (RHD3) family
Length = 834
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/40 (35%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 100 IWQTIKEIKGVELPNIPVMLAGNKCDE--SPEIREVSASE 137
IW+ IKE + ++LP VM+A +C+E + ++R+++ +E
Sbjct: 268 IWKVIKENRDLDLPAHKVMVATVRCEEIANEKLRDLATNE 307
>At3g13870.2 68416.m01752 root hair defective 3 (RHD3) identical to
root hair defective 3 (RHD3) GI:1839188 from
[Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811)
Length = 738
Score = 31.5 bits (68), Expect = 0.43
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 98 KPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
K +WQ IK+ K ++LP VM+A +C+E
Sbjct: 199 KQMWQVIKDNKDLDLPAHKVMVATVRCEE 227
>At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical to
root hair defective 3 (RHD3) GI:1839188 from
[Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811)
Length = 802
Score = 31.5 bits (68), Expect = 0.43
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 98 KPIWQTIKEIKGVELPNIPVMLAGNKCDE 126
K +WQ IK+ K ++LP VM+A +C+E
Sbjct: 263 KQMWQVIKDNKDLDLPAHKVMVATVRCEE 291
>At1g72960.1 68414.m08438 root hair defective 3 GTP-binding (RHD3)
family protein contains Pfam profile: PF05879 root hair
defective 3 GTP-binding protein (RHD3)
Length = 748
Score = 30.7 bits (66), Expect = 0.75
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 100 IWQTIKEIKGVELPNIPVMLAGNKCDE 126
IW+ IKE K ++LP VM+A +C+E
Sbjct: 223 IWRVIKENKDLDLPAHKVMVATVRCEE 249
>At4g03156.1 68417.m00430 small GTPase-related contains weak
similarity to Swiss-Prot:Q96283 ras-related protein
Rab11A [Arabidopsis thaliana]
Length = 77
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 127 SPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLF 164
S IR ++ +GQ A+ +SF+ETSA NV + F
Sbjct: 40 SHRIRTIAEEDGQILAKTESLSFLETSALEATNVEKAF 77
>At5g27410.1 68418.m03272 aminotransferase class IV family protein
contains Pfam profile: PF01063 aminotransferase class IV
Length = 559
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 84 LVYSVSSRQSLEEL-KPIWQTIKEIKGVELPNIPVMLAGNKCDESPEIREVSASEGQ 139
L+YS + R +E L +P++ + GV+ P +L+ +CD ++++ G+
Sbjct: 17 LMYSFAQRDDIEVLDEPLYAAFLKSTGVDRPYKDELLSKMECDGEKVVKDIIYGPGK 73
>At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975)
[Arabidopsis thaliana]; similar to Chain A, Pea Toc34
- A Novel Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 3 EQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDT 62
E + V+V G GGVGKSS V + E ++S ++ TL I DT
Sbjct: 34 EDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDT 93
Query: 63 TG 64
G
Sbjct: 94 PG 95
>At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975)
[Arabidopsis thaliana]; similar to Chain A, Pea Toc34
- A Novel Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 3 EQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDT 62
E + V+V G GGVGKSS V + E ++S ++ TL I DT
Sbjct: 34 EDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDT 93
Query: 63 TG 64
G
Sbjct: 94 PG 95
>At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975)
[Arabidopsis thaliana]; similar to Chain A, Pea Toc34
- A Novel Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 3 EQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQVISSNKTICTLQITDT 62
E + V+V G GGVGKSS V + E ++S ++ TL I DT
Sbjct: 34 EDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDT 93
Query: 63 TG 64
G
Sbjct: 94 PG 95
>At3g04680.2 68416.m00502 pre-mRNA cleavage complex family protein
similar to Pre-mRNA cleavage complex II protein Clp1
(Swiss-Prot:Q92989) [Homo sapiens]
Length = 444
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIED 42
PE S RV+V G GKS+L + ++ + PT D
Sbjct: 125 PESSQGPRVIVVGPTDSGKSTLTKMLLSWAAKQGWRPTFVD 165
>At3g04680.1 68416.m00501 pre-mRNA cleavage complex family protein
similar to Pre-mRNA cleavage complex II protein Clp1
(Swiss-Prot:Q92989) [Homo sapiens]
Length = 444
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 2 PEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIED 42
PE S RV+V G GKS+L + ++ + PT D
Sbjct: 125 PESSQGPRVIVVGPTDSGKSTLTKMLLSWAAKQGWRPTFVD 165
>At1g03830.1 68414.m00364 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 991
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 132 EVSASEGQAQA---QAWGVS-FMETSAKTNHNVTQLFQELLNMEKNRNV 176
E+ ++GQ +A Q +S +ET AK N +Q ++N EK++N+
Sbjct: 821 EIDRAKGQIEALERQKMELSETLETRAKQNEEEVTKWQRIINAEKSKNI 869
>At3g42690.1 68416.m04439 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At2g11345, At4g04130
Length = 1009
Score = 27.9 bits (59), Expect = 5.3
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 67 QFPAMQRLSISK-GHAFILVYSVSSRQSLEELK-PIWQTIKEIK-GVELPNIPVMLAGNK 123
QF + L +++ H+ L + + +RQ L + K +W L + G
Sbjct: 21 QFKKLFELPVARCSHSAKLSHGMLARQLLTQRKHELWTVYGGYPLRFSLKEFQIT-TGLN 79
Query: 124 CDESPEIREVSASEGQAQAQAWGVSFMETSAKTNHNVTQLFQELLNMEKNRN 175
CD+ P EV + A W F E T +V ++ + +N E N
Sbjct: 80 CDKLPTDSEVEDHQDPAYLSVWNRLFGEKCVVTVMDVVEMLRGDVNAEPRNN 131
>At5g09520.1 68418.m01101 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 130
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 87 SVSSRQSLEELKPIWQTIKEIKGVELPNIP 116
SV +R+ LEE KP T E+ E+P +P
Sbjct: 29 SVGARRLLEEPKPEIPTFPELPKPEMPKLP 58
>At3g09960.1 68416.m01194 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 311
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 93 SLEELKPIWQTIK-EIKGVELPNIPVMLAGNKCDESPEIREV 133
++ +L +W ++ +I+ + + V+ G+ CD PE R+V
Sbjct: 18 NISKLNKLWLNLQSDIQNSDFSSALVIFLGDYCDRGPETRKV 59
>At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to
atToc33 protein (GI:11557973) [Arabidopsis thaliana];
Carboxyl-terminal end highly similar to GTP-binding
protein SP:U43377, location of EST gb|AA394770 and
gb|R30089; identical to cDNA for chloroplast atToc33
protein GI:11557972
Length = 297
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 6 NDYRVVVFGAGGVGKSSLVLRFVKGTFRESYIPTIEDTYRQV-ISSNKTICTLQITDTTG 64
N V+V G GGVGKSS V + G P + R V +S T+ I DT G
Sbjct: 35 NSMTVLVLGKGGVGKSSTVNSLI-GEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPG 93
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,245,559
Number of Sequences: 28952
Number of extensions: 152232
Number of successful extensions: 568
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 346
Number of HSP's gapped (non-prelim): 104
length of query: 209
length of database: 12,070,560
effective HSP length: 78
effective length of query: 131
effective length of database: 9,812,304
effective search space: 1285411824
effective search space used: 1285411824
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -