Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000301-TA|BGIBMGA000301-PA|IPR013818|Lipase, N-terminal,
IPR008262|Lipase, active site, IPR000734|Lipase, IPR002331|Pancreatic
lipase
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 30 0.73
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 29 1.7
SPCC737.05 |||peroxin Pex28/29|Schizosaccharomyces pombe|chr 3||... 28 2.9
SPBC1734.13 |atp3||F1-ATPase gamma subunit |Schizosaccharomyces ... 27 5.1
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 27 5.1
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb... 27 5.1
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 27 6.8
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 27 6.8
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 27 9.0
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 30.3 bits (65), Expect = 0.73
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 82 LPRVVINTRFILYTKKNPTDGQLLNVNVNKTIVKSNFD 119
L R++I ++ Y K+ T + LN T++ S+FD
Sbjct: 554 LQRLIIEGKYTYYIKRQGTQNKQLNCRDESTVIPSDFD 591
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 451 NYVKLEHGSTYTIVVTHPMDMGGK 474
N V LEHGS+ +++T P +MGGK
Sbjct: 705 NDVNLEHGSSELLIITGP-NMGGK 727
>SPCC737.05 |||peroxin Pex28/29|Schizosaccharomyces pombe|chr
3|||Manual
Length = 264
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 8 DRHLRVMLWCILLGLQPAFGGILDPFNWARSDRIEVNIPWLPFENE 53
DR+L + +W L+ L P L F A+ D ++P+L NE
Sbjct: 139 DRYLPIAIWIGLISLHPKLRSYLIQFYSAKRD----HVPYLQIRNE 180
>SPBC1734.13 |atp3||F1-ATPase gamma subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 27.5 bits (58), Expect = 5.1
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 362 GFHADS----TPGLVANRDNLTENEVYPSEEHETIGAKYFLSTGKEQPFCQRHYRVTIQL 417
GFHA S T + R +N ++ +T+ + ++YRV+ ++
Sbjct: 23 GFHASSPCEATLKEIEQRLKSIKNIEKITKTIKTVAQTKLTRAQRAMEASNKYYRVSDEV 82
Query: 418 ANPKGAESWVQG-FLKVALLSDRGVIRGMDLTPNNYVKLEHGSTYTIVVTHPMDMGGKVR 476
G ++ +G L VA SD+G+ G+ + + ++ E T T +G KVR
Sbjct: 83 FKEAGTKAPEEGKTLMVACSSDKGLCGGIHSSISRLIRRELHDPKTFENTSLCILGEKVR 142
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 455 LEHGSTYTIVVTHPMDMGGKVRKVELSWEYDMNVLEPRSLCILWCNDRLY-VKSVIVDHM 513
L HGS YTI + D G R + + + + V R + +D Y +KSV M
Sbjct: 705 LVHGSQYTITLVSVKDSNGCKRSLNTA-DTVIKVRRQRPTATFYSSDNTYTLKSVEGALM 763
Query: 514 ELPSR 518
++P R
Sbjct: 764 KIPLR 768
>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.5 bits (58), Expect = 5.1
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 123 PTKMIVHGFIDTPLSNWVSEMKDELVKAGDFNVVIVDW-AGGSLPLYTQATANTRLVGLE 181
P +I HG + + NW S K K D ++ +D G P A + + L+
Sbjct: 21 PPVLIFHGLLGSK-RNWRSLAKKFSCKL-DRDIYAIDQRCHGDSPCV--APLSYSAMALD 76
Query: 182 IAHFINTLEKDHGLNPQDVHIIGHSLGAHTA 212
F+ KDH L+ IIGHS+GA TA
Sbjct: 77 AFQFM----KDHKLDKAS--IIGHSMGAKTA 101
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 256 HTDGKSIFLLGYGMSQPVGHLDFYPNNGKEQPG 288
H +GK F G P+ H F+P N E PG
Sbjct: 589 HENGKHDF----GQLSPIEHKPFFPKNDDELPG 617
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 143 MKDELVKAGDFNVVIVDWAGGSLPLYTQATA 173
++DEL AG NVVIV AG + P YT A
Sbjct: 407 LRDEL--AGKRNVVIVSSAGNNGPAYTTVGA 435
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 119 DPQKPTKMIVHGFIDTPLSNWVSEMKDELVKAGDFNVVIVDW 160
+ +K KM+ + F ++ KDE+V GD N I D+
Sbjct: 124 ETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDF 165
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.140 0.445
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,758,090
Number of Sequences: 5004
Number of extensions: 122852
Number of successful extensions: 250
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 246
Number of HSP's gapped (non-prelim): 11
length of query: 553
length of database: 2,362,478
effective HSP length: 76
effective length of query: 477
effective length of database: 1,982,174
effective search space: 945496998
effective search space used: 945496998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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