Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000301-TA|BGIBMGA000301-PA|IPR013818|Lipase, N-terminal,
IPR008262|Lipase, active site, IPR000734|Lipase, IPR002331|Pancreatic
lipase
(553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0277 + 21843658-21845220,21846533-21846718,21847037-218471... 31 2.4
04_01_0169 + 1880490-1880623,1880985-1881236,1881315-1881425,188... 31 2.4
07_01_0216 - 1615604-1615626,1615835-1617782 31 3.2
06_03_0823 - 25026949-25027551,25027635-25027742,25027994-250281... 31 3.2
04_04_0750 + 27763841-27763972,27764311-27764485,27764908-277649... 29 7.3
03_02_0260 - 6924532-6924757,6925443-6925546,6925729-6926007,692... 29 7.3
03_01_0145 - 1158306-1158706,1159012-1159177,1159250-1159438,115... 29 7.3
01_01_0607 + 4508225-4508282,4508391-4508452,4508534-4508614,450... 29 9.6
>11_06_0277 +
21843658-21845220,21846533-21846718,21847037-21847165,
21847256-21847415,21847846-21847955,21848038-21848247,
21848473-21848730,21848810-21848885,21849217-21849350,
21849928-21850007,21850265-21850316
Length = 985
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 159 DWAGGSLPLYTQATANTRL--VGLEIAHFINTLEKDHGLNPQDVHIIGHSLGAHTAGYAG 216
DW + +A A R +G + L HG +P H++GH+ A AG
Sbjct: 28 DWEDATAAFREEAEAALRSLSIGEDDGAAAERLAARHGGSPLAHHVVGHARAA--LARAG 85
Query: 217 ERIQGLGRITGLDPAEP 233
+ + L R GL P P
Sbjct: 86 DAVAPLRRAAGLAPGCP 102
>04_01_0169 +
1880490-1880623,1880985-1881236,1881315-1881425,
1881514-1881592,1881676-1881768,1881849-1882034
Length = 284
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Query: 40 RIEVNIPWLPFENETRCYDELGCLNITRSWYHLIHR 75
R VN LP E + +D NI R YH IHR
Sbjct: 216 RYRVNPEDLPREEQQTSFDNTAIKNIQRDLYHFIHR 251
>07_01_0216 - 1615604-1615626,1615835-1617782
Length = 656
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Query: 192 DHGLNPQDVHIIGHSLGAHTAGYAGERIQGLGRITGL 228
DHG NPQ H++G T GY I G++T L
Sbjct: 502 DHGANPQTTHVVG------TIGYLAPEIALTGKVTPL 532
>06_03_0823 -
25026949-25027551,25027635-25027742,25027994-25028107,
25028200-25028309,25028432-25028520,25028637-25028833,
25028961-25029122,25029255-25029373,25029488-25029541,
25029687-25029769,25029894-25029982,25030105-25030257,
25030373-25030465,25032070-25032136,25032238-25032350,
25033466-25033561,25034415-25034594
Length = 809
Score = 30.7 bits (66), Expect = 3.2
Identities = 36/140 (25%), Positives = 49/140 (35%), Gaps = 12/140 (8%)
Query: 222 LGRITGLDPAEPYFQGMPTHIRLDPTDAQLVDVIHTDGKSIFLLGYGMSQPVGHLDFYPN 281
L GL P F+ MP I P V +I +GK I L S G Y
Sbjct: 528 LSATIGLKNYGPLFEKMPAGIVGGP-----VKLIDNNGKGIDLSNSSWSYKAGLAGEYRQ 582
Query: 282 NGKEQPGC--DLTEGPLV---PLTLVKQGLEEASRVLVACNHVRAIKLFTESINGKCAYI 336
++PGC D G + P T K + + + + +NG +
Sbjct: 583 IHLDKPGCTWDNNNGTVPINKPFTWYKTTFQAPAGEDTVVVDLLGLNKGVAWVNGN--NL 640
Query: 337 GHQCPSYQHFLAGKCFHCGH 356
G PSY G C HC +
Sbjct: 641 GRYWPSYTAAEMGGCHHCDY 660
>04_04_0750 +
27763841-27763972,27764311-27764485,27764908-27764998,
27764999-27765133,27765683-27765742,27765876-27765951,
27766037-27766174,27766509-27767373,27767763-27767865,
27768101-27768176,27768329-27768393,27768463-27768493,
27768618-27768725
Length = 684
Score = 29.5 bits (63), Expect = 7.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 358 CAVMGFHADSTPGLVANRDNLTENEVYPSEEH-ETIGAK 395
CA++ A +A+ D L++NE YP EE+ E +G +
Sbjct: 198 CAIL--QASLADSFLADLDELSDNEAYPEEENAEAVGTE 234
>03_02_0260 -
6924532-6924757,6925443-6925546,6925729-6926007,
6926093-6926368,6926460-6926678,6926758-6926926,
6927208-6927382,6927489-6927600,6929566-6929820
Length = 604
Score = 29.5 bits (63), Expect = 7.3
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 299 LTLVKQGLEEASRVLVACNHVRAIKLFTESINGKCAYIGHQCPSYQHFLAGKCFHCGHGC 358
L L++ GLE+ + + A V LF + GK + + + +AG+ FH G
Sbjct: 114 LKLIELGLEDCVQEIDA-QRVLGYALFKD---GKDTKLSYPLEKFHSDVAGRSFHNGRFI 169
Query: 359 AVMGFHADSTPGLVANRDNLTENEVYPSEEHETIGAKYFLSTGKE 403
M A S P + + +T E+ G KY +G+E
Sbjct: 170 QRMRQKAASLPNVQLEQGTVTS---LVEEDGTVKGVKYKTKSGEE 211
>03_01_0145 -
1158306-1158706,1159012-1159177,1159250-1159438,
1159554-1159766
Length = 322
Score = 29.5 bits (63), Expect = 7.3
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 163 GSLPLYTQATANTRLVGLEIAHFINTLEKDHGLNPQDVHIIG--HSLG-AHTAGYAGERI 219
G+ + + A AN ++A + HGL+ D+ I+ H++G AH + ++ R+
Sbjct: 149 GNTSVASDAMANLPRPTSDVAQLTQSFAT-HGLSQDDMVILSGAHTIGVAHCSSFSS-RL 206
Query: 220 QGLGRITGLDPA 231
G TG DPA
Sbjct: 207 YGYNSSTGQDPA 218
>01_01_0607 +
4508225-4508282,4508391-4508452,4508534-4508614,
4508930-4508993,4509750-4509817,4510277-4510378,
4510525-4510614,4510759-4510833,4510935-4510967,
4511544-4511618,4511784-4511843,4512006-4512098
Length = 286
Score = 29.1 bits (62), Expect = 9.6
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 162 GGSLPLYTQATANTRLVGLEIAHFINTLEKDHGLNPQDVHIIGHSLGAHTAGYAGER--I 219
GG L +A N L G + + + +E++ G P+ V + + A +G G++ +
Sbjct: 201 GGKLDSI-EAKQNYSLAG--VMYLVEFIEQNGGRLPRSVEHLQRT--ARLSGITGDQKQL 255
Query: 220 QGLGRITGLDPAEPYFQGM 238
QGLG++ ++ A P G+
Sbjct: 256 QGLGQLLAIESATPVGSGL 274
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.140 0.445
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,805,521
Number of Sequences: 37544
Number of extensions: 790621
Number of successful extensions: 1416
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1414
Number of HSP's gapped (non-prelim): 8
length of query: 553
length of database: 14,793,348
effective HSP length: 86
effective length of query: 467
effective length of database: 11,564,564
effective search space: 5400651388
effective search space used: 5400651388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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