Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000301-TA|BGIBMGA000301-PA|IPR013818|Lipase, N-terminal,
IPR008262|Lipase, active site, IPR000734|Lipase, IPR002331|Pancreatic
lipase
(553 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 202 8e-52
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 2e-43
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 173 3e-43
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 105 7e-23
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 99 5e-21
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 3e-17
SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-04
SB_11616| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_39321| Best HMM Match : RVT_1 (HMM E-Value=4.5e-39) 31 2.4
SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.2
SB_1356| Best HMM Match : GCV_T (HMM E-Value=5.1e-40) 30 5.6
SB_22791| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.6
SB_40804| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_39504| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00014) 29 7.4
SB_32348| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_3788| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00073) 29 7.4
SB_1792| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7e-11) 29 7.4
SB_41552| Best HMM Match : RVT_1 (HMM E-Value=5.4e-32) 29 7.4
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_32926| Best HMM Match : DUF310 (HMM E-Value=7.4) 29 7.4
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 29 7.4
SB_29272| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06) 29 9.7
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 202 bits (492), Expect = 8e-52
Identities = 125/327 (38%), Positives = 169/327 (51%), Gaps = 37/327 (11%)
Query: 53 ETRCYDELGCLNITRSWYHLIHRPFNVFPLPRVVINTRFILYTKKNPTDGQLLNVNVNKT 112
ET CYD GC + H +R + P I+T+F+LYT+++P Q L +++ T
Sbjct: 41 ETVCYDVYGCFSND----HPFNRKYVPLPESPASIHTQFMLYTRESPVQYQQLYEDMDIT 96
Query: 113 IVKSNFDPQKPTKMIVHGFID-TPLSN-------WVSEMKDELVKAGDFNVVIVDWAGGS 164
++F+ + T +I+HGF T L++ W MK+EL+ GDFNV+IVDW G+
Sbjct: 97 R-DTHFNASRRTVIIIHGFAGFTTLTSIRHEVNWWGFPMKNELLWEGDFNVIIVDWMRGA 155
Query: 165 LPLYTQATANTRLVGLEIAHFINTLEKDHGLNPQDVHIIGHSLGAHTAGYAGERIQGLG- 223
+T+A ANTRLVG + A + LE+ G VH+IG S GAH AGY G R++ G
Sbjct: 156 WFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIGFSFGAHVAGYVGRRMKKRGR 215
Query: 224 ---RITGLDPAEPYFQGMPTHIRLDPTDAQLVDVIHTDGKSIFLLGYGMSQPVGHLDFYP 280
RIT LDPA +F +RLD +DA VDVIHT YG++ +GH DFYP
Sbjct: 216 MIDRITALDPAAMWFHKHHEDVRLDTSDALFVDVIHTSA------DYGITSTIGHADFYP 269
Query: 281 NNGKEQPGCDLTEGPLVPLTLVKQGLEEASRVLVACNHVRAIKLFTESINGKCAYIGHQC 340
N GK+QPGCD + C H RA LFT S+ K + C
Sbjct: 270 NGGKKQPGCD--------------NFFRGFSSYLFCGHKRAPALFTTSLYTKTPLYSYPC 315
Query: 341 PSYQHFLAGKCFHCGHGCAVMGFHADS 367
S F +G C C C MGF D+
Sbjct: 316 RSEDDFNSGNCLKCDGKCPTMGFRLDT 342
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 173 bits (422), Expect = 2e-43
Identities = 95/243 (39%), Positives = 128/243 (52%), Gaps = 26/243 (10%)
Query: 139 WVSEMKDELVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIAHFINTLEKDHGLNPQ 198
W++ ++ L+K D NV+ DW+ G+ Y QATANTR+VG +I I L G P
Sbjct: 628 WMNRIRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPA 687
Query: 199 DVHIIGHSLGAHTAGYAGERI----QGLGRITGLDPAEPYFQGMPTHIRLDPTDAQLVDV 254
+++G SLGAH +GY G RI Q L RITGLDPA +F +RLDP+DA VDV
Sbjct: 688 SFYLVGFSLGAHISGYVGRRIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDV 747
Query: 255 IHTDGKSIFLLGYGMSQPVGHLDFYPNNGKEQPGC-DLTEGPLVPLTLVKQGLEEASRVL 313
+HTD G GH+DFYPN GK+QPGC DL +GP+
Sbjct: 748 MHTDMDLA-----GTPTVSGHIDFYPNGGKKQPGCRDLLDGPI---------------NY 787
Query: 314 VACNHVRAIKLFTESINGKCAYIGHQCPSYQHFLAGKCFHC-GHGCAVMGFHADSTPGLV 372
V C+H+RA + + ES+ C + C S F G CF C C +G++A G+
Sbjct: 788 VICDHMRAPEYYAESVTTTCPMLAFPCTSMDDFERGYCFDCENRPCPSVGYNAGKRKGVA 847
Query: 373 ANR 375
+
Sbjct: 848 TGK 850
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 56 CYDELGCLNITRSWYHLIHRPFNVFPLPRVVINTRFILYTKKNPTDGQLLNVNVNKTIVK 115
CY + GC + + +RP P P + T F L+T+ NP +++ + +
Sbjct: 457 CYPKYGCFHDNPPF----NRPLVPLPHPPDRVGTNFRLFTRSNPLISNVIDDSDVSKLQA 512
Query: 116 SNFDPQKPTKMIVHGFID 133
S +D +K T +IVHGFI+
Sbjct: 513 SRYDGKKRTIIIVHGFIE 530
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 173 bits (421), Expect = 3e-43
Identities = 102/239 (42%), Positives = 140/239 (58%), Gaps = 23/239 (9%)
Query: 76 PFN--VFPLPRVV--INTRFILYTKKNPTDGQLLNVNVNKTIVKSNFDPQKPTKMIVHGF 131
PF+ + PLP+ I TR +LYT+ +P ++L+ TI KS+F P + T+ IVHG+
Sbjct: 36 PFDRTLVPLPQSPRDIGTRLLLYTQASPDKYEVLSDADTATIEKSSFLPHRTTRFIVHGY 95
Query: 132 -----IDTPLSN---WVSEMKDELVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIA 183
+D+ + W MKDEL++ D NV+IVDW G+ Y +A ANTRLVG ++A
Sbjct: 96 AGLDSVDSIIDLKGWWGIRMKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVA 155
Query: 184 HFINTLEKDHGLNPQDV-HIIGHSLGAHTAGYAGERIQGLG----RITGLDPAEPYFQGM 238
F+ T+ G H IG SLGAH +GY G+R++ +G RITGLDPA F+G
Sbjct: 156 AFMKTILSLSGSREGGAFHSIGFSLGAHISGYVGQRLKRIGRHLDRITGLDPATLMFKGE 215
Query: 239 PTHIRLDPTDAQLVDVIHTDGKSIFLLGYGMSQPVGHLDFYPNNGKEQPGCDLTEGPLV 297
+RLD DAQ VDVIHT +G++ P GH+DFYPN G Q GC L +G +
Sbjct: 216 APDVRLDRLDAQFVDVIHTS------YVFGITAPHGHMDFYPNGGTSQRGCSLWDGTFI 268
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 105 bits (253), Expect = 7e-23
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
Query: 126 MIVHGFIDTPLSNWVSEMKDELVKAGDFNVVIVDWAGGS--LPLYTQATANTRLVGLEIA 183
+I+HGF+ + +W+ M+DEL+K NV+ VDW G+ L LY A NTR+VG ++A
Sbjct: 27 LIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQLA 86
Query: 184 HFINTLEKDHGLNPQDVHIIGHSLGAHTAGYAGERIQG-LGRIT 226
I T+++ + + VH+IGHSLGAH AGYAGER+ G +GRIT
Sbjct: 87 ELITTIQRVFDFDLRRVHLIGHSLGAHVAGYAGERLSGKVGRIT 130
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 99 bits (238), Expect = 5e-21
Identities = 64/160 (40%), Positives = 79/160 (49%), Gaps = 22/160 (13%)
Query: 228 LDPAEPYFQGMPTHIRLDPTDAQLVDVIHTDGKSIFLLGYGMSQPVGHLDFYPNNGKEQP 287
LDPA YF +RLDP+DA+ VDV+HTD + G S GH+DFYPN GK QP
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTD-----MDFAGTSTQSGHIDFYPNGGKNQP 56
Query: 288 GC-DLTEGPLVPLTLVKQGLEEASRVLVACNHVRAIKLFTESINGKCAYIGHQCPSYQHF 346
GC D+ +GP S L C+HVRA FTESI +CA C S F
Sbjct: 57 GCRDIADGP--------------SNAL-KCDHVRAHDYFTESITSQCAMRAFPCASMHDF 101
Query: 347 LAGKCFHCGHG-CAVMGFHADSTPGLVANRDNLTENEVYP 385
G CF C + C G++A + G + L N P
Sbjct: 102 ERGLCFDCVNNLCPSAGYNAVKSKGKAKGKYFLYTNRDEP 141
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 87.0 bits (206), Expect = 3e-17
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 56 CYDELGCLNITRSWYHLIHRPFNVFPLPRVVINTRFILYTKKNPTDGQLLNVNVNKTIVK 115
CY + GC + + RPF P P + T F L+T+ +P + + +V K +
Sbjct: 41 CYGKYGCFSDASPF----SRPFVPLPAPPSKVGTSFQLFTRSHPHLVSIDDSDVKK-LKA 95
Query: 116 SNFDPQKPTKMIVHGFIDTPLSNWVSEMKDELVKAGDFNVVIVDWAGGSLPLYTQATANT 175
S +D +K T +I HG+ ++ ++WV M+ L++ D NVVI DW G+ +Y QATANT
Sbjct: 96 STYDGKKRTFVIAHGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADGMYWQATANT 155
Query: 176 RLVGLE 181
RLVG +
Sbjct: 156 RLVGAQ 161
>SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 139 WVSEMKDELVKAGDFNVVIVDWAGGSLPLYTQATANTRL 177
W MK+EL+ GDFNV+IVDW G+ +T+A ANTRL
Sbjct: 15 WGFPMKNELLWEGDFNVIIVDWMRGAWFPFTRAVANTRL 53
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 44.8 bits (101), Expect = 2e-04
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 182 IAHFINTLEKDHGLNPQDVHIIGHSLGAHTAGYAGERIQG-----LGRITG 227
IA + L K G P +IG SLG H AGYAG RI+ LGRI+G
Sbjct: 1 IAELVKFLNKQTGNTPSSFTVIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51
>SB_11616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 44.4 bits (100), Expect = 2e-04
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 314 VACNHVRAIKLFTESINGKCAYIGHQCPSYQHFLAGKCFHC-GHGCAVMGFHADSTPGLV 372
V C+H+RA + + ES+ C + C S F G CF C C +G++A G+
Sbjct: 6 VICDHMRAPEYYAESVTTTCPMLAFPCTSMDDFERGYCFDCENRPCPSVGYNAGKRKGVA 65
Query: 373 ANR 375
+
Sbjct: 66 TGK 68
>SB_39321| Best HMM Match : RVT_1 (HMM E-Value=4.5e-39)
Length = 900
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 147 LVKAGDFNVVIVDWAGGSLP--LYTQATANTRLVGLEIAHF 185
++ GDFN+ +DWA S+P L+ A AN + + HF
Sbjct: 304 VILTGDFNLPSIDWATSSVPLLLHQVAQANFGHYRVRLTHF 344
>SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2033
Score = 30.3 bits (65), Expect = 4.2
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 147 LVKAGDFNVVIVDWAGGSLPLY--TQATANTRLVGLEIAHFIN 187
++ GDFN+ +DWA S+PL Q +A L+ L I+ N
Sbjct: 1957 VILTGDFNLPSIDWATSSVPLVQKMQTSAGVYLILLMISILSN 1999
>SB_1356| Best HMM Match : GCV_T (HMM E-Value=5.1e-40)
Length = 1006
Score = 29.9 bits (64), Expect = 5.6
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 88 NTRFILYTKKNPTDGQLLNVNVNKTIVKSNFDPQKPTKMIVHGFIDTPLSNWVSEM-KDE 146
N + + + N G + N I+ D ++I +++ L + + K+
Sbjct: 774 NYKILRKDRDNNRGGGVFQAVKNDLIITHRPDWDSDCEIICLDELNSSLLKMGTTLHKNN 833
Query: 147 LVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIAHFINTLEKD 192
++ AGDFN +DW P +A+ RL+ + H +N K+
Sbjct: 834 VILAGDFNAPDIDWVNPENP-DKLTSASKRLLDITDDHDLNQFVKE 878
>SB_22791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1798
Score = 29.9 bits (64), Expect = 5.6
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 411 YRVTIQLANPKGAESWVQGFLKVALLSDRGVIRGMDLTP--NNYVKLEHGSTYTIVVTHP 468
Y++ +++ + G +G + + L+ D+G+ + L N +K + G TY V P
Sbjct: 683 YQLCLKMGDVLG--DGTEGNVYIQLVGDKGMTEQIQLRQHGNAKIKFDKGRTYKFTVETP 740
Query: 469 MDMGGKVRKVELSWEYD 485
D+G KV KV +S + D
Sbjct: 741 -DIG-KVEKVLVSHDSD 755
>SB_40804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 29.5 bits (63), Expect = 7.4
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 111 KTIVKSNFDPQKPTKMIVHGFIDTPLSNWVSEMKDE--LVKAGDFNVVIVDWAGGSLPLY 168
+TI+ ++ Q+ MI +D LS V+++ ++ DFN+ +DWA S+P
Sbjct: 285 ETILLGSYYRQESLGMISLDALDNSLSK-VTKLAGNRHVILTWDFNLPSIDWATSSVPPG 343
Query: 169 TQATANTRLVGLEIAHFINTLEKDH 193
+ AN L+IAH N + H
Sbjct: 344 AK-DANLCRRLLDIAHDFNLEQLVH 367
>SB_39504| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00014)
Length = 217
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 144 KDELVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIAHFINTLEKD 192
K+ ++ AGDFN +DW P +A+ RL+ + H +N K+
Sbjct: 127 KNNVILAGDFNAPDIDWVNPENP-DKLTSASKRLLDITDDHDLNQFVKE 174
>SB_32348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 144 KDELVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIAHFINTLEKD 192
K+ ++ AGDFN +DW P +A+ RL+ + H +N K+
Sbjct: 7 KNNVILAGDFNAPDIDWVNPENP-DKLTSASKRLLDITDDHDLNQFVKE 54
>SB_3788| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00073)
Length = 298
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 144 KDELVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIAHFINTLEKD 192
K+ ++ AGDFN +DW P +A+ RL+ + H +N K+
Sbjct: 143 KNNVILAGDFNAPDIDWVNPENP-DKLTSASKRLLDITDDHDLNQFVKE 190
>SB_1792| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7e-11)
Length = 476
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 144 KDELVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIAHFINTLEKD 192
K+ ++ AGDFN +DW P +A+ RL+ + H +N K+
Sbjct: 344 KNNVILAGDFNAPDIDWVNPENP-DKLTSASKRLLDITDDHDLNQFVKE 391
>SB_41552| Best HMM Match : RVT_1 (HMM E-Value=5.4e-32)
Length = 1241
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 144 KDELVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIAHFINTLEKD 192
K+ ++ AGDFN +DW P +A+ RL+ + H +N K+
Sbjct: 144 KNNVILAGDFNAPDIDWVNPENP-DKLTSASKRLLDITDDHDLNQFVKE 191
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 144 KDELVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIAHFINTLEKD 192
K+ ++ AGDFN +DW P +A+ RL+ + H +N K+
Sbjct: 344 KNNVILAGDFNAPDIDWVNPENP-DKLTSASKRLLDITDDHDLNQFVKE 391
>SB_32926| Best HMM Match : DUF310 (HMM E-Value=7.4)
Length = 316
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 144 KDELVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIAHFINTLEKD 192
K+ ++ AGDFN +DW P +A+ RL+ + H +N K+
Sbjct: 7 KNNVILAGDFNAPDIDWVNPENP-DKLTSASKRLLDITDDHDLNQFVKE 54
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 29.5 bits (63), Expect = 7.4
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 63 LNITRSWYHLIHRPFNVFPLPRVVINTRFILYTKKNPTDGQLLNVNVNKTIVKSN 117
L T WY H + + P RVV + R Y DGQ+L V +N+ N
Sbjct: 164 LPFTAKWYMFRHPLYGLTPAARVVKSKR--AYLGHFSPDGQILAVAMNQKYASDN 216
>SB_29272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 719
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 144 KDELVKAGDFNVVIVDWAGGSLPLYTQATANTRLVGLEIAHFINTLEKD 192
K+ ++ AGDFN +DW P +A+ RL+ + H +N K+
Sbjct: 7 KNNVILAGDFNAPDIDWVNPENP-DKLTSASKRLLDITDDHDLNQFVKE 54
>SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06)
Length = 218
Score = 29.1 bits (62), Expect = 9.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 330 NGKCAYIGHQCPSYQH----FLAGKCF-HCGHGCAVMGFHAD 366
NGKC+++G CP H GKC CG+ + +AD
Sbjct: 177 NGKCSFVGCSCPVGHHQSDSIPEGKCCPECGNFKIIYDHYAD 218
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.140 0.445
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,333,543
Number of Sequences: 59808
Number of extensions: 884277
Number of successful extensions: 1488
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1454
Number of HSP's gapped (non-prelim): 35
length of query: 553
length of database: 16,821,457
effective HSP length: 86
effective length of query: 467
effective length of database: 11,677,969
effective search space: 5453611523
effective search space used: 5453611523
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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