GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000301-TA|BGIBMGA000301-PA|IPR013818|Lipase, N-terminal,
IPR008262|Lipase, active site, IPR000734|Lipase, IPR002331|Pancreatic
lipase
         (553 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    25   1.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   6.6  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 508 VIVDHMELPSRGKRNVDFSSKLCTLKREFAEIP 540
           V ++++E P   KRN + S+    LK    E P
Sbjct: 172 VDINYVEYPQNSKRNSEESAICAMLKENMPEFP 204


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 359 AVMGFHADSTPGLVANRDNLTENEVYPSEEHETIGAKY 396
           AVMG H D    ++   D +  +   P+   +T+  KY
Sbjct: 362 AVMGCHPDIQEKVIQELDEIFGDSDRPATFQDTLEMKY 399


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.140    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,039
Number of Sequences: 429
Number of extensions: 8102
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 2
length of query: 553
length of database: 140,377
effective HSP length: 61
effective length of query: 492
effective length of database: 114,208
effective search space: 56190336
effective search space used: 56190336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)