Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000300-TA|BGIBMGA000300-PA|IPR005835|Nucleotidyl
transferase
(451 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein. 122 7e-28
AC006608-3|AAF39757.1| 404|Caenorhabditis elegans Pyrophosphory... 122 7e-28
AF016686-9|AAB66242.1| 300|Caenorhabditis elegans Hypothetical ... 39 0.006
Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical pr... 33 0.41
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 32 0.95
U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical pr... 31 1.7
AL022289-2|CAA18374.1| 478|Caenorhabditis elegans Hypothetical ... 31 2.2
Z77657-6|CAB01145.2| 381|Caenorhabditis elegans Hypothetical pr... 30 2.9
AF031841-1|AAC13677.1| 601|Caenorhabditis elegans GLY7 protein. 30 2.9
AC006774-7|AAF60620.1| 601|Caenorhabditis elegans Glycosylation... 30 2.9
Z77657-4|CAB01149.1| 347|Caenorhabditis elegans Hypothetical pr... 30 3.8
CU457741-19|CAM36360.1| 365|Caenorhabditis elegans Hypothetical... 30 3.8
AF043695-7|AAB97547.1| 373|Caenorhabditis elegans Hypothetical ... 30 3.8
U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha ... 29 5.1
AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta... 29 5.1
AF106575-8|AAC78169.1| 395|Caenorhabditis elegans Hypothetical ... 29 5.1
AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alph... 29 5.1
Z78015-7|CAB01438.1| 381|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z77657-10|CAB01152.1| 381|Caenorhabditis elegans Hypothetical p... 29 6.7
>U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein.
Length = 360
Score = 122 bits (293), Expect = 7e-28
Identities = 76/252 (30%), Positives = 136/252 (53%), Gaps = 16/252 (6%)
Query: 6 EFQVVVLAAGKGSRMPDVGGSVSKCLLPVGPYPVLWYPLNMLEKIGFQDVMIVVLD---- 61
E Q ++L +G G+RMP + V KCLLPV P+ YPL+ L + G D+ I V +
Sbjct: 3 EMQGILLCSGGGTRMPVLTRHVQKCLLPVVGVPMFLYPLSSLLRTGITDIKIFVREVLQL 62
Query: 62 --EDKSNILNALEKCPLKIKYELIVIPSEEDWGTANSLKHVSARINTDLLVISGDLITNI 119
E + LEK P I+Y + ++ED+GTA+ LK+ ++I D L++S D I++
Sbjct: 63 TLEKEVKKSKLLEKYPAHIEY---ICVNQEDFGTADLLKNHHSKITKDALIVSCDFISDA 119
Query: 120 NLNDVLNLHRKHDACVTTLFFNNGPEEWIELPGPKTKSKPDR--DLVCIDKETERLVFLA 177
+L +++ R ++ + L + + P P +KSK + D++ I + T +L FL
Sbjct: 120 SLIPLVDFFRATNSTLVALI----ADTCVNAPAPGSKSKKPKATDVMAIVESTGQLAFLC 175
Query: 178 SASDFEENVTIPRLLVKKYDALSIYSRLLDAHVYVMKHWILDYIVDSEKFTSIKGEVVPY 237
DF+ + + + L K + ++ + S+ D HVY ++H +L + S+ +S K + VP
Sbjct: 176 GDDDFDAPLVMEKSL-KIFPSIKLTSKYNDCHVYAIRHKVLLNLSKSKHISSFKADFVPL 234
Query: 238 IVKKQLTKPNNL 249
++ KQ +++
Sbjct: 235 LIDKQFEPDSDI 246
Score = 41.5 bits (93), Expect = 0.001
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 301 LRCYAH-IPSKNTFAI-RVNTLSSFYLSNNKILSKWQDLTGSSLFERFHPNSEVKTIQID 358
++C+A+ +P +N F NTL S Y NK + K T + N KT +I
Sbjct: 246 IKCFAYRLPHENGFVTAHANTLGS-YFEVNKAIQK--SFTRLMEYRGNGKNFNYKTDKIA 302
Query: 359 DN-CTVGEKTIINEKTSVKNSFIGSNCNIENKVRLTNCILMNNVTI 403
+ + E I++ + +K SFI NC I K +L I+ V I
Sbjct: 303 AHESRIEESAEIDKDSVIKRSFISDNCRIGEKTKLKESIIAKGVVI 348
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 349 NSEVKTIQIDDNCTVGEKTIINEKTSVKNSFIGSNC 384
+S +K I DNC +GEKT + E K IG+ C
Sbjct: 317 DSVIKRSFISDNCRIGEKTKLKESIIAKGVVIGNGC 352
>AC006608-3|AAF39757.1| 404|Caenorhabditis elegans
Pyrophosphorylase family protein 1 protein.
Length = 404
Score = 122 bits (293), Expect = 7e-28
Identities = 76/252 (30%), Positives = 136/252 (53%), Gaps = 16/252 (6%)
Query: 6 EFQVVVLAAGKGSRMPDVGGSVSKCLLPVGPYPVLWYPLNMLEKIGFQDVMIVVLD---- 61
E Q ++L +G G+RMP + V KCLLPV P+ YPL+ L + G D+ I V +
Sbjct: 3 EMQGILLCSGGGTRMPVLTRHVQKCLLPVVGVPMFLYPLSSLLRTGITDIKIFVREVLQL 62
Query: 62 --EDKSNILNALEKCPLKIKYELIVIPSEEDWGTANSLKHVSARINTDLLVISGDLITNI 119
E + LEK P I+Y + ++ED+GTA+ LK+ ++I D L++S D I++
Sbjct: 63 TLEKEVKKSKLLEKYPAHIEY---ICVNQEDFGTADLLKNHHSKITKDALIVSCDFISDA 119
Query: 120 NLNDVLNLHRKHDACVTTLFFNNGPEEWIELPGPKTKSKPDR--DLVCIDKETERLVFLA 177
+L +++ R ++ + L + + P P +KSK + D++ I + T +L FL
Sbjct: 120 SLIPLVDFFRATNSTLVALI----ADTCVNAPAPGSKSKKPKATDVMAIVESTGQLAFLC 175
Query: 178 SASDFEENVTIPRLLVKKYDALSIYSRLLDAHVYVMKHWILDYIVDSEKFTSIKGEVVPY 237
DF+ + + + L K + ++ + S+ D HVY ++H +L + S+ +S K + VP
Sbjct: 176 GDDDFDAPLVMEKSL-KIFPSIKLTSKYNDCHVYAIRHKVLLNLSKSKHISSFKADFVPL 234
Query: 238 IVKKQLTKPNNL 249
++ KQ +++
Sbjct: 235 LIDKQFEPDSDI 246
Score = 41.5 bits (93), Expect = 0.001
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 301 LRCYAH-IPSKNTFAI-RVNTLSSFYLSNNKILSKWQDLTGSSLFERFHPNSEVKTIQID 358
++C+A+ +P +N F NTL S Y NK + K T + N KT +I
Sbjct: 246 IKCFAYRLPHENGFVTAHANTLGS-YFEVNKAIQK--SFTRLMEYRGNGKNFNYKTDKIA 302
Query: 359 DN-CTVGEKTIINEKTSVKNSFIGSNCNIENKVRLTNCILMNNVTI 403
+ + E I++ + +K SFI NC I K +L I+ V I
Sbjct: 303 AHESRIEESAEIDKDSVIKRSFISDNCRIGEKTKLKESIIAKGVVI 348
Score = 36.7 bits (81), Expect = 0.033
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 349 NSEVKTIQIDDNCTVGEKTIINEKTSVKNSFIGSNCNIENKV 390
+S +K I DNC +GEKT + E K IG+ +I N +
Sbjct: 317 DSVIKRSFISDNCRIGEKTKLKESIIAKGVVIGNGASISNSI 358
>AF016686-9|AAB66242.1| 300|Caenorhabditis elegans Hypothetical
protein R07C3.13 protein.
Length = 300
Score = 39.1 bits (87), Expect = 0.006
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 248 NLVEKKGTSEKNAEINKGIFDYAIETGYERKIREISAYNDHKHGNKGVY-FNDTLRCYAH 306
N + + KNA+I K ++ G + KIR+ Y KH NK V+ T RC
Sbjct: 15 NSSQNSNKNTKNAKIKKKYINFP-HKGQKDKIRKFLLYKQAKHRNKSVFSIKRTRRCRCL 73
Query: 307 IPSK----NTF--AIRVNTLSSFYLS-NNKILSKWQDL-TGSSLFERFHPNSEVKTIQID 358
+PSK + F V S+ LS + + S ++L G + + E ++
Sbjct: 74 LPSKCFQAHFFLSCFVVCGQRSWLLSFSITVASSAEELKAGGDMDAKMKEMQEQSKKSME 133
Query: 359 D-NCTVGEKTIINEKTS---VKNSFIGSNCNIENKVRLTNCILMNNVTIKESL 407
+ + G K +NEKT+ V+ NI++ +LTN + N+TI ESL
Sbjct: 134 EMSKGFGVKIELNEKTTPTMVEQHVKDFRDNIKSVFKLTN---VQNLTIDESL 183
>Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical
protein D2085.3 protein.
Length = 666
Score = 33.1 bits (72), Expect = 0.41
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 357 IDDNCT---VGEKTIINEKTSVKNSFIGSNCNIENKVRLTNCILMNNVTIKES 406
+++NC+ +G KT I ++NS IG++ I +K R+T+ ++ N I E+
Sbjct: 322 LNNNCSTVCLGVKTDIAYDAFIRNSCIGAHTEISSKTRITSSMIGKNCKIGEN 374
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 360 NCTVGEKTIINEKTSVKNSFIGSNCNIENKVRLTNCILMNNVTI 403
N +G T I+ KT + +S IG NC I + + ++V I
Sbjct: 345 NSCIGAHTEISSKTRITSSMIGKNCKIGENCVIEYAFIGDDVVI 388
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 31.9 bits (69), Expect = 0.95
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 343 FERFHPNSEVKTIQIDDNCTVGE--KTIINEKTSVKNSFIGSNCNIENKVRLTNCILMNN 400
FE + +++ +NC GE T+ N K + +N FIG C++ N T I NN
Sbjct: 1550 FEGRNCTTDINECANPNNCINGECTNTLGNYKCACRNGFIGPRCSVRNP--CTAQIASNN 1607
Query: 401 VT 402
++
Sbjct: 1608 IS 1609
>U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical
protein F42C5.3 protein.
Length = 250
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 311 NTFAIRVNTLSSFYLSNNKILSKWQDLTGSSLFERFHPN-SEVKTIQIDDNCTVGEKTII 369
+T L+ ++ K+L K Q T S F+ + + +E+ + +D+ + KTII
Sbjct: 146 DTLIYNKEKLNEVLITAKKLLGKCQKFTTSDSFKVINDSLTELMRFKFEDDILIELKTII 205
Query: 370 NEKTSVKNSFI 380
+ S + SF+
Sbjct: 206 KKNGSAEQSFL 216
>AL022289-2|CAA18374.1| 478|Caenorhabditis elegans Hypothetical
protein ZK1225.2 protein.
Length = 478
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 351 EVKTIQIDDNCTVGEKTIINEKTSVKNSFIGSNCNIENKVRLTNCILMNNVTIKESLAQL 410
++KT+++ N T+ KTI+N + + ++ ++ + R L+N+V + + QL
Sbjct: 270 DLKTLKLFRNKTIINKTILNSEIEISTGYVQASLS-----RAAAQWLINDVDVTTFMNQL 324
Query: 411 TMTPKDCRVKF 421
+ K C +F
Sbjct: 325 NQSAKACDEQF 335
>Z77657-6|CAB01145.2| 381|Caenorhabditis elegans Hypothetical
protein F08H9.8 protein.
Length = 381
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 167 DKETERLVFLASASDFEENVTIPRLLVK-KYDALSIY 202
D TE++ +L A F+ NVTI L + ++D L +Y
Sbjct: 292 DSYTEQMFYLTVADGFQVNVTIDDFLTENRFDVLEVY 328
>AF031841-1|AAC13677.1| 601|Caenorhabditis elegans GLY7 protein.
Length = 601
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 53 QDVMIVVLDEDKSNILNALEKCPLKIKYELIVIPSEEDWGTANSLKHVSARINTDLLVIS 112
+ V++V D DK ++ L+K + ++IV+ +E+ G N+ + + A+ +T +V+
Sbjct: 189 EQVVMVDDDSDKPHLKEKLDKYVTRFNGKVIVVRTEQREGLINA-RSIGAKHSTGEVVLF 247
Query: 113 GDLITNINLN 122
D +N N
Sbjct: 248 LDAHCEVNTN 257
>AC006774-7|AAF60620.1| 601|Caenorhabditis elegans Glycosylation
related protein 7 protein.
Length = 601
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 53 QDVMIVVLDEDKSNILNALEKCPLKIKYELIVIPSEEDWGTANSLKHVSARINTDLLVIS 112
+ V++V D DK ++ L+K + ++IV+ +E+ G N+ + + A+ +T +V+
Sbjct: 189 EQVVMVDDDSDKPHLKEKLDKYVTRFNGKVIVVRTEQREGLINA-RSIGAKHSTGEVVLF 247
Query: 113 GDLITNINLN 122
D +N N
Sbjct: 248 LDAHCEVNTN 257
>Z77657-4|CAB01149.1| 347|Caenorhabditis elegans Hypothetical
protein F08H9.5 protein.
Length = 347
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 167 DKETERLVFLASASDFEENVTIPRLLVK-KYDALSIYS 203
D TE++ ++ + + F+ N+TIP + + YD L IY+
Sbjct: 292 DPYTEQIYYVNAPTGFQVNLTIPDFVTEANYDVLEIYN 329
>CU457741-19|CAM36360.1| 365|Caenorhabditis elegans Hypothetical
protein C42C1.5 protein.
Length = 365
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 362 TVGEKTIINEKTSVKNSFIGSNCNIENKVRLTN-CILMNNVTIKESL 407
T+ + I + V S +G C+I + VR+ N C++ ++V +K+ L
Sbjct: 295 TILSDSSIGNYSWVSGSIVGRKCHIGSWVRIENICVIGDDVVVKDEL 341
>AF043695-7|AAB97547.1| 373|Caenorhabditis elegans Hypothetical
protein C42C1.5 protein.
Length = 373
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 362 TVGEKTIINEKTSVKNSFIGSNCNIENKVRLTN-CILMNNVTIKESL 407
T+ + I + V S +G C+I + VR+ N C++ ++V +K+ L
Sbjct: 303 TILSDSSIGNYSWVSGSIVGRKCHIGSWVRIENICVIGDDVVVKDEL 349
>U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha
family protein 2 protein.
Length = 531
Score = 29.5 bits (63), Expect = 5.1
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 91 WGTANSLKHVSARINTDLL-VISGDLITNINLNDVLNLHRKHDACVTTLFFNNGPEEWIE 149
W +N +H + ++L V+S L+ + D + DAC + +GP+E IE
Sbjct: 241 WAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQHTD---RQVRQDACWAVSYLTDGPDEQIE 297
Query: 150 LPGPKTKSKPDRDLVCIDKETERLV 174
L +S +V KE E LV
Sbjct: 298 L---ARESGVLPHVVAFFKEAENLV 319
>AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta
binding domain proteinprotein.
Length = 531
Score = 29.5 bits (63), Expect = 5.1
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 91 WGTANSLKHVSARINTDLL-VISGDLITNINLNDVLNLHRKHDACVTTLFFNNGPEEWIE 149
W +N +H + ++L V+S L+ + D + DAC + +GP+E IE
Sbjct: 241 WAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQHTD---RQVRQDACWAVSYLTDGPDEQIE 297
Query: 150 LPGPKTKSKPDRDLVCIDKETERLV 174
L +S +V KE E LV
Sbjct: 298 L---ARESGVLPHVVAFFKEAENLV 319
>AF106575-8|AAC78169.1| 395|Caenorhabditis elegans Hypothetical
protein K04F1.10 protein.
Length = 395
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 326 SNNKILSKWQDLTGSSLFERFHPNSEVK--TIQIDDNCTVGEKTIINEKTSVK 376
S N I S Q+ S ++F E IQID+NC V EK + + ++K
Sbjct: 20 STNPICSFTQEFITSESLKQFPKECETVFGNIQIDENCDVSEKQLTSAFKNMK 72
>AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alpha 2
protein.
Length = 531
Score = 29.5 bits (63), Expect = 5.1
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 91 WGTANSLKHVSARINTDLL-VISGDLITNINLNDVLNLHRKHDACVTTLFFNNGPEEWIE 149
W +N +H + ++L V+S L+ + D + DAC + +GP+E IE
Sbjct: 241 WAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQHTD---RQVRQDACWAVSYLTDGPDEQIE 297
Query: 150 LPGPKTKSKPDRDLVCIDKETERLV 174
L +S +V KE E LV
Sbjct: 298 L---ARESGVLPHVVAFFKEAENLV 319
>Z78015-7|CAB01438.1| 381|Caenorhabditis elegans Hypothetical
protein F08H9.9 protein.
Length = 381
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 167 DKETERLVFLASASDFEENVTIPRLLVK-KYDALSIY 202
D TE++ + + A F+ NVTI L + ++D L +Y
Sbjct: 292 DSYTEQMYYFSVADGFQVNVTIDDFLTENRFDVLEVY 328
>Z77657-10|CAB01152.1| 381|Caenorhabditis elegans Hypothetical
protein F08H9.9 protein.
Length = 381
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 167 DKETERLVFLASASDFEENVTIPRLLVK-KYDALSIY 202
D TE++ + + A F+ NVTI L + ++D L +Y
Sbjct: 292 DSYTEQMYYFSVADGFQVNVTIDDFLTENRFDVLEVY 328
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.135 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,609,816
Number of Sequences: 27539
Number of extensions: 519257
Number of successful extensions: 1246
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1229
Number of HSP's gapped (non-prelim): 27
length of query: 451
length of database: 12,573,161
effective HSP length: 84
effective length of query: 367
effective length of database: 10,259,885
effective search space: 3765377795
effective search space used: 3765377795
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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