Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000299-TA|BGIBMGA000299-PA|undefined
(286 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0376 - 7883631-7883858,7883941-7884069,7884172-7884390,788... 36 0.049
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 31 1.4
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 31 1.4
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 30 1.9
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 30 2.5
05_01_0488 - 4070506-4072277,4072455-4072557 29 3.2
03_06_0644 + 35253858-35254112,35254301-35254390,35254475-352545... 29 3.2
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 29 4.3
02_04_0113 - 19861904-19862197,19862338-19862496,19862580-198638... 29 4.3
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 29 5.7
11_04_0359 + 16735204-16735676,16736597-16736647,16736860-167369... 28 7.5
04_04_0206 + 23595268-23595279,23595475-23596317,23597037-235970... 28 7.5
03_02_0686 + 10407800-10409501,10409611-10410284 28 7.5
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 28 9.9
04_01_0619 - 8125611-8127967,8128449-8130123 28 9.9
02_05_0186 + 26569594-26570271 28 9.9
01_01_0858 - 6699126-6699128,6699219-6699318,6700052-6700278,670... 28 9.9
>03_02_0376 -
7883631-7883858,7883941-7884069,7884172-7884390,
7884505-7884801,7886534-7886839
Length = 392
Score = 35.5 bits (78), Expect = 0.049
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 58 KELNDNQNKLSVDLEGLWQPIEVLRSTKADREEVADALRDKAGIAALNGLVSLQQFDAVQ 117
K L DN+ +L L+ +W+ + + K RE + AL A A L ++ Q DAV
Sbjct: 263 KRLLDNKFELDKLLDSVWKDVLIEHKNKGSRECLIAALDKMADAAGLPPYGAVNQVDAVV 322
Query: 118 GDFEKRILTAYDKFNNQEMIWQKAIDDLFRGL 149
+ K + A ++ E ++K + D+ R +
Sbjct: 323 NEALKTV-NADERTAVDEAGFKKLLTDILRAV 353
>07_03_1424 - 26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 30.7 bits (66), Expect = 1.4
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 15 LESGLDNMAETLANAGGDTTAVTELNGHFSNLQFDLENMFLSQ-KELNDNQNKLSVDLEG 73
LE ++ET A + + L L E +SQ KELNDN +S+D
Sbjct: 1390 LEEEAMMISETKAMLEDKSKVIEGLEHEILLLNSSEEGRLMSQIKELNDNLKIISIDKGN 1449
Query: 74 LWQPIEVLRSTKADREEVADALRDKAGIAALNG--LVSLQQFDAVQGDFEKRIL 125
L + E+L+ T D+ E+A AL ++ A++ + + A + + E RIL
Sbjct: 1450 LEE--EILKLT--DKLEMAVALAEENEAASIEARQAAEISKVYAEEKEEEVRIL 1499
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 30.7 bits (66), Expect = 1.4
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 75 WQPIEVLRSTKADREEVADALRDKAGIAALNGLVSLQQFDAVQGDFEKRILTAYDKFNNQ 134
++ ++V T + +E D R+ + + L S Q DA+Q D ++ + +Q
Sbjct: 551 FEDVQVHTYTAEETKEAFDVARNSIELLS-TVLSSSPQQDALQDDLTSTLVQQC--YQSQ 607
Query: 135 EMIWQKAIDDLFRGLNEKADYVQVTSLRDEIQKYLNMFDSRINAMSEILGEPRAAAI-LR 193
I Q+ I+ G NE A + S+ DEIQK L+ ++ + E R I +
Sbjct: 608 HTI-QRMIETA--GDNE-AMLFEALSVNDEIQKVLSKYEQMKKPAASENAEQRPVVIPIA 663
Query: 194 KIHRDSA 200
H DSA
Sbjct: 664 TEHEDSA 670
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 2 TNYQEQLTQMQHDLESGLDNMAETLANAGGDTTAVTELNGHFSNLQFDLENMFLSQKELN 61
++ +EQ+ + ++ES L + + L + + + + H S +EN+ ++ ++
Sbjct: 387 SSIKEQIQAVDLNVES-LQALVQELKDGNVELKGI--IRNHESTEVLHIENLRRLER-MS 442
Query: 62 DNQNKLSVDLEGLWQPIEVLRSTKADREEVADALRDKAGIAALNGLVSLQQFDAV 116
+ + L L + +EVLR KA+ EE L K V + Q +A+
Sbjct: 443 EKNSYLEKSLSAVTTELEVLREKKAELEESCKHLSSKISSHQSERAVLVAQIEAI 497
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 29.9 bits (64), Expect = 2.5
Identities = 38/174 (21%), Positives = 76/174 (43%), Gaps = 19/174 (10%)
Query: 2 TNYQEQLTQMQHDLESGLDNMAETLANAGGDTTAVTELNGHFSNLQFDLENMFLS----Q 57
T++ QL + DLE L + E + ++ + + + Q DLEN S
Sbjct: 330 TSHVAQLQENVADLEKNLASEREKIQHSSQTLKEMESVYNKHAKRQEDLENNMKSCKDQF 389
Query: 58 KELNDNQNKLSVDLEGLWQPIEVLR-STKADREEVADALRDKAGIAALNGLVSLQQFDAV 116
KE K DL+ L Q I+ L T+ D ++ ++ ++ +++ ++
Sbjct: 390 KEFERKDVKYREDLKHLKQKIKKLEDKTEKDTSKIDESTKE------------VEESSSL 437
Query: 117 QGDFEKRILTAYDKFNNQEMIWQKAIDDLFRGLNEKADYVQVTSLRDEIQKYLN 170
E+ I +KFN +E + ++ I + R E+ ++T +R E++ + N
Sbjct: 438 IPQLEEEIPKLQEKFNEEEKVLEQ-IKENSREETERL-RSKLTQVRSELEPWEN 489
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 29.5 bits (63), Expect = 3.2
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 11/161 (6%)
Query: 2 TNYQEQLTQMQHDLESGLDNMAETLANAGGDTTAVTELNGHFSNLQFDLENMFLSQKELN 61
+NY +++M + E D AE L + + E F L D EN + +L
Sbjct: 346 SNYS--VSEMVNLQELMKDTQAE-LEKVSQEKEVLRERVLEFEQLLGDFENSGMEVAKLP 402
Query: 62 DNQNKLSVDLEGLWQPIEVLRSTKADREE-VADALR----DKAGIAA-LNGLVSLQ-QFD 114
+ L +EG Q VL+ + E+ V D+L+ +K+ ++A L+ L +
Sbjct: 403 ETIKNLGAQIEGTLQEKSVLQDRIKELEQAVHDSLQNHSLEKSSLSAELSKLSEANASLE 462
Query: 115 AVQGDFEKRILTAYDKFNNQEMIWQKAIDDLFRGL-NEKAD 154
A E + YD+ N+ + +K I L + L N K D
Sbjct: 463 AKLASVEAELKQVYDEKANESLNSEKEISRLNQELANVKTD 503
>03_06_0644 +
35253858-35254112,35254301-35254390,35254475-35254596,
35254731-35254830,35254955-35255001,35255178-35255256,
35255722-35255769
Length = 246
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 206 TPAVMDLEEPGTIPALPALSSRSPGVGA 233
TPAV++L GT+PA A + PG GA
Sbjct: 58 TPAVVELVHSGTLPAGDATTVLVPGCGA 85
>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/144 (19%), Positives = 60/144 (41%)
Query: 38 ELNGHFSNLQFDLENMFLSQKELNDNQNKLSVDLEGLWQPIEVLRSTKADREEVADALRD 97
EL G +LQ +E + ++EL L+ + I +LR + AD L+D
Sbjct: 1505 ELCGVVGSLQVAIEGAKIVKEELEKKITTLTEEGNTKDGEISLLRQANERLQVEADILKD 1564
Query: 98 KAGIAALNGLVSLQQFDAVQGDFEKRILTAYDKFNNQEMIWQKAIDDLFRGLNEKADYVQ 157
K + + ++ + +G+F + A N + +KA++ + KA+
Sbjct: 1565 KEDSLTSSHELLSKEVEQHEGEFVVLMDDAISSSVNAAVYEEKALELMTENTELKANLST 1624
Query: 158 VTSLRDEIQKYLNMFDSRINAMSE 181
+L + ++N + ++S+
Sbjct: 1625 HVALIASLSDHVNELEENTLSLSK 1648
>02_04_0113 -
19861904-19862197,19862338-19862496,19862580-19863833,
19864086-19864124
Length = 581
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 167 KYLNMFDSRINAMSEILGEPRAAAILRKIHRDSACLSCATPAVMDLEEPG 216
KY + DS IN + I P + + K CLS PA+ DLE G
Sbjct: 202 KYFSSTDSDINNL--ISSCPLLSTLCLKYFEGITCLSIQAPALQDLEVKG 249
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 28.7 bits (61), Expect = 5.7
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Query: 6 EQLTQMQHDLESGLDNMAETLANAGGDTTAVTELNGHFSNLQFDLENMFLSQKELNDNQN 65
E+LT+ +LE + + + G T A + N H+++LQ ++ KEL D
Sbjct: 111 EELTRRIEELELEKEKLVK------GVTEAENKQNLHYTSLQEAQRSLADKDKELADATQ 164
Query: 66 KLSVDLEGLWQPIEVLRSTKADREEVADALRDKAGIAALNGLVSLQQFDAVQGDFEKRIL 125
L L E ++ +A+ AD L + L + Q+ + +K +
Sbjct: 165 SLKELGSELESSKERIQEIEAELAASADKLHKLEELKDERSLHAAQEAKRA-SELDKTLE 223
Query: 126 TAYDKFNNQEMIWQ-KAIDDLFRGLNEKA-DYVQV-TSLRDEIQK 167
TA + N +EM Q ++ + +G +KA D+ QV SLR + +
Sbjct: 224 TA--QLNMKEMEAQISSLQEEIKGHQDKAIDHQQVEESLRSTLSE 266
>11_04_0359 +
16735204-16735676,16736597-16736647,16736860-16736934,
16737011-16737062,16737147-16737280,16737397-16737511,
16737665-16737751,16737855-16737903,16738351-16738435,
16738641-16738715,16738848-16739029,16739905-16739969
Length = 480
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 88 REEVADALRDKAGIAALNGLVSLQQFDAVQGDFEKRILTAYDKFNNQEMIWQKAIDDLFR 147
RE++A L++ LNG+ + ++ G F++R+ A +++ +D+
Sbjct: 287 REKLALKLQNAINSVGLNGISLEEDPQSLSGGFKRRLALAIQLVQTPDLL---LLDEPLA 343
Query: 148 GLNEKADYVQVTSLRD 163
GL+ KA V L+D
Sbjct: 344 GLDWKARADVVNLLKD 359
>04_04_0206 +
23595268-23595279,23595475-23596317,23597037-23597088,
23597328-23597395,23597482-23597585,23597681-23597768,
23598405-23598722
Length = 494
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 156 VQVTSLRDEIQKYLNMFDSRINAM--SEILGEPRAAAILRKIHRDSA 200
V + +D + ++ N F + + + ++I G+P +A + +H++SA
Sbjct: 326 VHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESA 372
>03_02_0686 + 10407800-10409501,10409611-10410284
Length = 791
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/48 (22%), Positives = 26/48 (54%)
Query: 135 EMIWQKAIDDLFRGLNEKADYVQVTSLRDEIQKYLNMFDSRINAMSEI 182
E++ + +++ E +V V LR++I K F++ +NA+ ++
Sbjct: 484 EILGKSTYGTVYKATMENGTFVAVKRLREKIAKNQKEFEAEVNALGKL 531
>08_02_1236 +
25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 27.9 bits (59), Expect = 9.9
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 78 IEVLRSTKADREEVADALRDK--AGI--AALNGLVSLQQFDAVQGDFEKRILTAYDKFNN 133
+ +L + D E DAL D +GI AA+ V +A EK TA D
Sbjct: 542 VNLLENRADDNRE--DALEDAFTSGIDEAAITSGVDEAAMEADASTVEKNDDTAIDGTET 599
Query: 134 QEMIWQKAIDDLFRGLNEKADYVQVTSLRDEIQKY 168
+E +K DD+ +GL+ D V+ DE+ +
Sbjct: 600 KEK-HEKTNDDILQGLDLSKDNVECGVNGDEVSTF 633
>04_01_0619 - 8125611-8127967,8128449-8130123
Length = 1343
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 124 ILTAYDKFNNQEMIWQKAIDDLFRGLNEKADYVQVTSLRDEIQKYLNMFDSRINAM 179
I+ A D F+ +++ + +F+G V + L E+++ + FDS +A+
Sbjct: 1254 IVRATDNFSETKLLGAGSFGKVFKGQLNDGTMVAIKVLNMELEQAIRSFDSECHAL 1309
>02_05_0186 + 26569594-26570271
Length = 225
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 216 GTIPALP--ALSSRSPGVGAESLNPKEDGDHLCY 247
G PA P SS S G G + P++DG H Y
Sbjct: 17 GEAPASPPSTASSSSDGAGGKKKRPRKDGHHPTY 50
>01_01_0858 -
6699126-6699128,6699219-6699318,6700052-6700278,
6701032-6701188,6701422-6701522,6702147-6702251
Length = 230
Score = 27.9 bits (59), Expect = 9.9
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 4 YQEQLTQMQHDLESGLDNMAETLANAGGDTTAVTELNGHFSNLQFDLENMFLSQKELNDN 63
Y +QL + ++ D++A ++ A G + H +L +F+ Q +L
Sbjct: 71 YSKQLNASRLEVLQAQDDLAMSMLEAAGKELLYITRDHHVYK---NLLRIFIVQDKLTKK 127
Query: 64 QNKLSVDLEGLWQPIEVLRSTKADREEVADAL 95
+ S L L +P +LR K DRE V L
Sbjct: 128 NPEQS--LLRLKEPAVILRCRKEDRELVESVL 157
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.132 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,008,516
Number of Sequences: 37544
Number of extensions: 324726
Number of successful extensions: 980
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 972
Number of HSP's gapped (non-prelim): 20
length of query: 286
length of database: 14,793,348
effective HSP length: 81
effective length of query: 205
effective length of database: 11,752,284
effective search space: 2409218220
effective search space used: 2409218220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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