Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000298-TA|BGIBMGA000298-PA|IPR002557|Chitin binding
Peritrophin-A
(356 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 32 0.11
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 30 0.43
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 30 0.57
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 30 0.57
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 30 0.57
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.57
SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch... 29 0.76
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 29 1.3
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 28 2.3
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 2.3
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 27 3.1
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 3.1
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 27 3.1
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 27 3.1
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 3.1
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 27 3.1
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 27 4.0
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 27 4.0
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 4.0
SPBC2G2.06c |apl1||AP-2 adaptor complex subunit Apl1 |Schizosacc... 27 5.3
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 27 5.3
SPCC61.02 |spt3||histone acetyltransferase complex subunit Spt3|... 27 5.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 7.1
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 7.1
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 7.1
SPAC1F7.07c |fip1||iron permease Fip1|Schizosaccharomyces pombe|... 26 7.1
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 26 9.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 9.3
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 32.3 bits (70), Expect = 0.11
Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 3/157 (1%)
Query: 197 TLSVVTQEQFAELEAQIKALQEKLAPTGKADFPENAQLLQELRKGASLTDAMAALQLSAR 256
TL V++EQ A+ K L + + + + + KGAS D ++S +
Sbjct: 345 TLETVSEEQMGSSNAKSKVLTSEPKDSTSVEAEKTETDEPAVGKGAS--DVSDTAEISEK 402
Query: 257 LEAAEKTLDQMLSLLTEVAIKKPNIDQHLTKQIKPDKMDTGLPIASFKAPLQEISVPLAS 316
EA + L ++V +K + D++ + D + I + E V
Sbjct: 403 TEAKNADSEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKE 462
Query: 317 SKTTDATMPTLAADAKDLNDLTILDTSKQNFDVVTRD 353
+ + +A D+K+ D + +T + DV ++
Sbjct: 463 TDSIEANDKDEKTDSKETED-KVEETESKEADVKAKE 498
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 30.3 bits (65), Expect = 0.43
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 112 QNKSETTNNK-RENENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRYTQSI 170
Q K + N R+ + P+++E ++ +S + P S + PV++ + D S
Sbjct: 113 QGKPRSYNELLRQASSAPAVNETSSSGLLQSKDKRSQSPHSPKKPVKNSSSRDQPVRNSG 172
Query: 171 SSTYSALPPSG 181
+++ ++LPP+G
Sbjct: 173 ATSTASLPPAG 183
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 29.9 bits (64), Expect = 0.57
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 11/128 (8%)
Query: 110 PEQNKSETTNNKR-----ENENDPSIDEIYTTAHNK--SPQQTHDIPDSTEDPVQ-DITK 161
P + NN R +N+N P + A N +PQQ + ++ Q +
Sbjct: 103 PTAGPNRLANNPRVMPRLQNQNVPMQAGMQQFARNMKLTPQQRQFLLQQSQIQQQRQQQQ 162
Query: 162 DDHRYTQSISSTYSALPPSGNDELTEARHGSIMTPTLSVVTQEQFAELEAQIKALQEKLA 221
+ Q ++ P + N E + R GS+ + +TQ+Q L QI AL LA
Sbjct: 163 QQSQQPQQTQQPQASSPTAPNTEANQQRSGSVPGRIVPALTQQQLNNLCNQITAL---LA 219
Query: 222 PTGKADFP 229
G P
Sbjct: 220 RNGNPPIP 227
Score = 27.9 bits (59), Expect = 2.3
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 202 TQEQFAELEAQIKA-LQEKLAPTGKADFPENAQ--LLQELRKGASLTDAMAALQLSARLE 258
+Q+ FA+ + Q + L PT + +N Q + +L A+ T+ + L AR
Sbjct: 446 SQQAFAQQQQQQQQQLHRTSNPTSASVTSQNGQQPINTKLSANAAKTNYQSYLTNKAR-N 504
Query: 259 AAEKTLDQMLSLLTEVAIKKPNIDQHLTKQIKPDKMDTGLPIASFKAPLQEISVPLASSK 318
A + T +S + PN+D T + P A KA + +SVPL+ ++
Sbjct: 505 ATQPT-QPPVSQVDYSNNLPPNLDTSSTF-----RSSASPPSAFTKAGNEALSVPLSGAR 558
Query: 319 TTDATMPT-LAA 329
T A+ PT LAA
Sbjct: 559 NTAASRPTNLAA 570
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 29.9 bits (64), Expect = 0.57
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 8/179 (4%)
Query: 163 DHRYTQSISSTYSALPPSGNDELTEARHGSIMTPTLSVVTQEQFAELEAQ--IKALQEKL 220
D ++ + ++ Y P +L +A + PT + E F+ +EAQ K ++L
Sbjct: 302 DPQHPEECTTLYEDFHPFQPLQLVQANRKCMEFPTYNECVDEFFSSIEAQKLKKRAHDRL 361
Query: 221 APTGK---ADFPENAQLLQELRKGASLTDAMAALQLSARLEAAEKTLDQMLSLLTEVAIK 277
A + + + A+ LQ L + A T A+ A + E E + + SLL + +
Sbjct: 362 ATAERRLESAKEDQARKLQSL-QDAQATCALRAQAIEMNPELVEAIISYINSLLNQ-GMD 419
Query: 278 KPNIDQHLTKQIKPDKMDTGLPIASFKAPLQEISVPLASSKTTDATMPTLAADAKDLND 336
+I++ + Q + + + I K ++V L + ++ D + + DL+D
Sbjct: 420 WLDIEKLIQSQKRRSPVAAAIQI-PLKLIKNAVTVFLPNPESVDNSDESSETSDDDLDD 477
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 29.9 bits (64), Expect = 0.57
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 111 EQNKSETTNNKRENENDPSIDEIYTTAHN 139
++N S +N K +N PS++ +TTA+N
Sbjct: 1184 KENISSQSNRKADNNGTPSVNNSFTTANN 1212
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.57
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 83 EVDCTKSEKFYSLNLELYGSTAPPIIQPEQNKSETTNNKRENENDPSIDEIYTTAHNKSP 142
+++ TK E+ + + + + E+ K E N NE I E+ A S
Sbjct: 1576 QLESTKQYYEKEKETEILAARSELVAEKEKTKEELENQL--NEKSQRIKELEEQAQKNSS 1633
Query: 143 QQTHD-IPDSTEDPVQDITKDD 163
+ THD I D + V++ K++
Sbjct: 1634 ENTHDNIDDMIKQQVEEKLKEN 1655
>SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 611
Score = 29.5 bits (63), Expect = 0.76
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 257 LEAAEKTLDQMLSLLTEVAIKKPNIDQHLTKQIKPDKMDTGLPIASFKAPLQEIS 311
+E E L +++S + + KP QH+T Q DK + P F+ PL+ I+
Sbjct: 267 MEVVEDLLVRLVSFAKGITLAKPF--QHITYQHAIDKYGSDKPDIRFELPLKNIT 319
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 71 FDQETRVCERVDEVDCTKSEKFYSLNLELYGSTAPPIIQPEQNKSETTNNKRENENDPSI 130
F + ++ E +DE SE+ EL A ++ N + T+ R+ E
Sbjct: 117 FLEAHKILENLDEQTRKLSERTEKQQDEL--DIALDDLEETLNTLKRTSENRDREIARIS 174
Query: 131 DEIYTTAHNKSPQQTHDIPDSTEDPVQDITKD 162
++YT + PQ I S E+ +Q+++++
Sbjct: 175 QDVYTMSTITLPQSLEQIKKSQEEALQNLSRE 206
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 27.9 bits (59), Expect = 2.3
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 11/164 (6%)
Query: 109 QPEQNKSETTNNKRENENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDIT--KDDHRY 166
Q E K+ +TN E +++ AH + DS D DI+ +DD++
Sbjct: 22 QKEAAKNSSTNGSVNIEGTQDSNDLQYNAHLFKSSNPKEEYDSAIDVRNDISQDEDDYKR 81
Query: 167 TQSISSTYSALPP-SGNDELTEARHGSIMTPTLSVVTQEQFAELEA--QIKALQEKLAPT 223
T ++ +Y + EL P +++Q + E+ Q + +L PT
Sbjct: 82 TNDVNDSYRLVRQYEAPKELLNEYADESYDPMQERQSKKQIQDRESDYQKQRYDRQLTPT 141
Query: 224 GKADF-PENAQLLQELRKGASLTDAMAALQLSARLEAAEKTLDQ 266
F P+ Q G S + M ++L L+Q
Sbjct: 142 RVDAFQPDGTQ-----SNGRSYAEVMRQVELEKEERRVHMELNQ 180
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 282 DQHLTKQIKPDKMDTGLPIASFKAPLQEISVPLASSKTTDATMPTLAA 329
+Q++T + PD + I FKA ++ L + KT + TL++
Sbjct: 249 NQYITSIVSPDSSCENIRILGFKAETNAATISLFAPKTPEKLQITLSS 296
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 27.5 bits (58), Expect = 3.1
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 181 GNDELTEARHGSIMTPTLSVVTQEQFAELEAQIKALQEKLAPTGKADFPENAQLLQELRK 240
GN++L E R GSI + E+ ELE K L + + + A+ E+
Sbjct: 58 GNNDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSDLVRRIQIQ--RDEAEQKAEIYN 115
Query: 241 GASLTDAMAALQLSARLEAAEKTL 264
+L L + RLE +++T+
Sbjct: 116 RDALNTKQEHLDIKKRLEKSDETV 139
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 27.5 bits (58), Expect = 3.1
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 103 TAPPIIQPEQNKSETTNNKRENENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKD 162
TAP + +K TT +KR +++D + E + A + P T P + P +
Sbjct: 451 TAPTETAHDFSKETTTASKRVSKHDKASAEKHKVA--RKPSSTGQEPTTPSTPAKSAQSS 508
Query: 163 DH--RYTQSISS-----TYSALPPSGNDELTEA 188
H R ++ S+ T SA P G EA
Sbjct: 509 KHARRPSKQASAPSSPGTTSAAVPGGKKSAIEA 541
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 27.5 bits (58), Expect = 3.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 116 ETTNNKRENENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRYTQSISSTYS 175
E N+ EN+ D YT A +P+ D P+ + D+ D H ISS+
Sbjct: 108 EKLNSSLSVENN---DSTYTDATLIAPKIGLDRPNINAITI-DV--DGHSLQNEISSSTD 161
Query: 176 ALPPSGNDELTEARHGSI 193
L PS +D L E + S+
Sbjct: 162 KLSPSQSDALFEQKQDSL 179
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 27.5 bits (58), Expect = 3.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 117 TTNNKRENENDPS-IDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDD 163
+T N N+N S I TTA K+P + D TED V D+ ++D
Sbjct: 777 STANGTSNQNTTSEITTSETTATEKTPSNSSD----TEDDVGDVVEND 820
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 109 QPEQNKSETTNNKRENENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRYT 167
+PEQ K ++ + N+N P++ I P +D Q I++ H+ T
Sbjct: 112 EPEQQKKALSSKIKSNDNKPAVQSI----QRHGPDVAAPSSQPAKDQSQQISQGSHKRT 166
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 27.5 bits (58), Expect = 3.1
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 65 CLNGTVFDQETRVCERVDEVDCTKSEKFYSLNLEL-YGSTAPPIIQPEQNKSETTNNKRE 123
CL+ + TRV DE D F+ L L A P++ P+ + S T+++
Sbjct: 212 CLDHIINSLGTRVSGDFDE-DFPTGTVFFDLESHLPLLDVALPVL-PKSSDSSETSHESS 269
Query: 124 NENDPSIDEIYTTAHNKSPQQTHDI 148
N N E +T H+ + + D+
Sbjct: 270 NSNLKKSSESGSTNHHNNHESDKDL 294
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 106 PIIQPEQNKSETTNNKRENENDPSIDEIYTTAH 138
P++QP ++ T NN + ++P+I E + H
Sbjct: 160 PVVQPSVDEGTTQNNLQMGLDEPNIIEGFAEGH 192
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 104 APPIIQPEQNKSETTNNKRENENDPSIDEIYTTAHNK 140
+PPI+Q ++N S N+K E+ P + NK
Sbjct: 405 SPPILQNQENISSNDNSKSSPESSPPARKTTGKIENK 441
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 109 QPEQNKSETTNNKRENENDPSIDEIYTTAHNKSPQQTHDIPDSTED 154
+P+ NK E T + + S++ ++T+ H K P+ +I S+ED
Sbjct: 103 RPKANKVEVT----DLPSSSSVEHLHTSKHLKGPRLPKNIIKSSED 144
>SPBC2G2.06c |apl1||AP-2 adaptor complex subunit Apl1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 677
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 13 LVYLDFDNLPETNFTCAGKVIGGYYAD-LETSCQMFHVCTVGQQDEPMDIKFLCLNGTV 70
++Y + D+L E + A I G YA+ +E S + + G DEP++I+ L +
Sbjct: 431 ILYENLDSLDEPDAKSAVIWILGQYAEEIEDSITLLNDYLKGFFDEPLEIQLTLLTAVI 489
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 113 NKSETTNNKRENENDPSID-EIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHR 165
+++ + N EN D S E ++T H+ P + S ED + + KD+ R
Sbjct: 645 SEATSPNTHHENLRDTSQKRESHSTPHDYEPHVSDKNDKSVEDKLHFVQKDESR 698
>SPCC61.02 |spt3||histone acetyltransferase complex subunit
Spt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 307
Score = 26.6 bits (56), Expect = 5.3
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 229 PENAQLLQELRKGASLTDAMAALQLSARLEAAEKTLDQMLSLLTEVAIKKPNIDQHLT-K 287
PE QL++EL +G + + A +L+ R + T++ + L+ K + +L+ K
Sbjct: 29 PETTQLVEELIRGQVMEMLIQANELALRRGSRSITVEDLFFLIRHDRAKVNRLKTYLSWK 88
Query: 288 QIKPDKMDTGLPIASFKAPLQEI 310
+++ + A K +E+
Sbjct: 89 EVRKKAKEQDANPADTKDLFEEV 111
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 226 ADFPENAQLLQELRKGASLTDAMAALQLSARLEAAEKTLDQMLSL 270
A N + E++KG L ++M +LQL R + E T +++L+L
Sbjct: 3571 AGHQHNDLSVPEVQKGVGLFNSMLSLQLGERAQLVEFT-NELLAL 3614
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 238 LRKGASLTDAMAALQLSARLEAAEKTLDQMLSLLTEVAIKKPN 280
L K ++D + + + +R E +TL Q++ L E A +PN
Sbjct: 1021 LEKFDKISDQILEIAMQSRKENDGRTLKQVIQLTFEKATDEPN 1063
Score = 25.8 bits (54), Expect = 9.3
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 121 KRENENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRYTQSISSTYSALPPS 180
KRE + +P I A +++ T ++TE V D TK + ST S PS
Sbjct: 706 KREADKNPEIKSSAPLASSEANVDTSKQTNATEPEVVDKTKVEKLKASEGKSTSSLSSPS 765
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 7.1
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 208 ELEAQIKALQEKLAPTGKADFPENAQLLQELRKGASLTDAMAALQLSARLEAA-EKTLDQ 266
ELE +I L + + GK E + L R L + L+ +LE +K L++
Sbjct: 1252 ELERKITNLMHEYSQLGKTFEDEKRKALIASRDNEELRSLKSELESKRKLEVEYQKVLEE 1311
Query: 267 M---LSLLTEVAIKKPNIDQHLTKQIKPDKMDTGL 298
+ SL +EV + + + H + + K +++ L
Sbjct: 1312 VKTTRSLRSEVTLLRNKVADHESIRSKLSEVEMKL 1346
>SPAC1F7.07c |fip1||iron permease Fip1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 397
Score = 26.2 bits (55), Expect = 7.1
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 95 LNLELYGSTAPPIIQPEQNKSE-TTNNKRENENDPSIDEIYTTAHNKSPQQTHDIPDSTE 153
++LE S P +Q ++ E N+ +++ D +ID + + SP + H D T
Sbjct: 331 VDLEAASSHTP--VQSSSSEDEFKINSPTDDKGDKAIDIVTEVRESSSPVEEHK-DDKTV 387
Query: 154 DPVQDITKDDH 164
D + +I ++ H
Sbjct: 388 DVINEI-RESH 397
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 128 PSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRY 166
PS+ ++ NKSP IP + D + DD Y
Sbjct: 168 PSMKDLALFHGNKSPSSKETIPKVSNSNSSDTSTDDQAY 206
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 109 QPEQNKSETTNNKRENENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDD 163
+P +++ E + + + +D DE++ SP TH+ ED + KDD
Sbjct: 352 KPGKSQGEISEQEEDEYDDAESDEMH------SPYSTHEPESEPEDQDEPSEKDD 400
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.128 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,640,085
Number of Sequences: 5004
Number of extensions: 70761
Number of successful extensions: 269
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 252
Number of HSP's gapped (non-prelim): 35
length of query: 356
length of database: 2,362,478
effective HSP length: 74
effective length of query: 282
effective length of database: 1,992,182
effective search space: 561795324
effective search space used: 561795324
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 54 (25.8 bits)
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