GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000297-TA|BGIBMGA000297-PA|undefined
         (71 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   2.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   2.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    19   6.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    19   6.6  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.2 bits (40), Expect = 2.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)

Query: 46  VSSVVRKNIEIAIMPK 61
           VS+V RK+ EI+ +PK
Sbjct: 234 VSNVKRKSKEISKLPK 249


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.2 bits (40), Expect = 2.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)

Query: 46  VSSVVRKNIEIAIMPK 61
           VS+V RK+ EI+ +PK
Sbjct: 234 VSNVKRKSKEISKLPK 249


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 47  SSVVRKNIEIAIMPKIRHIDL 67
           S+V  + IE+  M KIR + L
Sbjct: 451 SAVCHQTIELVKMLKIRFVIL 471


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 47  SSVVRKNIEIAIMPKIRHIDL 67
           S+V  + IE+  M KIR + L
Sbjct: 176 SAVCHQTIELVKMLKIRFVIL 196


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.138    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8814
Number of Sequences: 317
Number of extensions: 176
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 71
length of database: 114,650
effective HSP length: 45
effective length of query: 26
effective length of database: 100,385
effective search space:  2610010
effective search space used:  2610010
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.1 bits)
S2: 35 (18.2 bits)