Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000296-TA|BGIBMGA000296-PA|undefined
         (234 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   1.2  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   8.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.2  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.2  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 185 GIFTGQRAQNSAEKADMECVYKISYKDFGKRCNIKFNTDTKELKFYAIRT 234
           G  T + A  ++EK   E ++K   +D+ ++C +    D KE+ +  + T
Sbjct: 244 GQITRRIAAVASEKIKNEIIWKKLREDYTRQCRLVRKVD-KEIAYIVLLT 292


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 128 LAEAMKVTAIYDKYDVNEYL 147
           LAE  K T  YD  D++E +
Sbjct: 18  LAENSKYTTKYDNVDLDEII 37


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/26 (26%), Positives = 15/26 (57%)

Query: 206 KISYKDFGKRCNIKFNTDTKELKFYA 231
           +I + D G+   +  N + + +KF+A
Sbjct: 479 EIHFIDIGENITVGVNPEPERMKFWA 504


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/26 (26%), Positives = 15/26 (57%)

Query: 206 KISYKDFGKRCNIKFNTDTKELKFYA 231
           +I + D G+   +  N + + +KF+A
Sbjct: 481 EIHFIDIGENITVGVNPEPERMKFWA 506


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 14/44 (31%), Positives = 18/44 (40%)

Query: 45  NYIREDVWWSTAGTAQNMDAVQEYRVLLTSIIKQKASVACFLAE 88
           NYI+  +  ST  T+    A   Y     S I   AS+  F  E
Sbjct: 187 NYIKPQLHVSTGSTSSPTIASATYTNSANSSIWSPASIDSFTLE 230


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,500
Number of Sequences: 317
Number of extensions: 1922
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 234
length of database: 114,650
effective HSP length: 55
effective length of query: 179
effective length of database: 97,215
effective search space: 17401485
effective search space used: 17401485
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)