BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000296-TA|BGIBMGA000296-PA|undefined
(234 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146726-1|AAO12086.1| 136|Anopheles gambiae odorant-binding pr... 23 5.9
>AY146726-1|AAO12086.1| 136|Anopheles gambiae odorant-binding
protein AgamOBP19 protein.
Length = 136
Score = 23.4 bits (48), Expect = 5.9
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 79 KASVACFLAEGDGSGRTLVGVNMCLPQEKGRFVDHKPPKTKAGLLSLRMLAEAMK 133
K V+C L + + V L Q DH P +AGL + + A+ +K
Sbjct: 59 KCYVSCLLDIMQVARKGKVNYEKSLKQIDTMLPDHMKPAFRAGLEACKSAAQGVK 113
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,243
Number of Sequences: 2123
Number of extensions: 8552
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 1
length of query: 234
length of database: 516,269
effective HSP length: 62
effective length of query: 172
effective length of database: 384,643
effective search space: 66158596
effective search space used: 66158596
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)
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